Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 07:43:17 (30228): vboxwrapper version 26210
2025-10-10 07:43:17 (30228): BOINC client version: 7.16.20
2025-10-10 07:43:18 (30228): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-10 07:43:18 (30228): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 07:43:18 (30228): Create VM. (boinc_0f6898f561086d04, slot#3)
2025-10-10 07:43:19 (30228): Setting Memory Size for VM. (4800MB)
2025-10-10 07:43:19 (30228): Setting CPU Count for VM. (8)
2025-10-10 07:43:19 (30228): Setting Chipset Options for VM.
2025-10-10 07:43:19 (30228): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 07:43:20 (30228): Setting Boot Options for VM.
2025-10-10 07:43:20 (30228): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 07:43:20 (30228): Enabling VM Network Access.
2025-10-10 07:43:21 (30228): Disabling USB Support for VM.
2025-10-10 07:43:21 (30228): Disabling COM Port Support for VM.
2025-10-10 07:43:21 (30228): Disabling LPT Port Support for VM.
2025-10-10 07:43:21 (30228): Disabling Audio Support for VM.
2025-10-10 07:43:22 (30228): Disabling Clipboard Support for VM.
2025-10-10 07:43:22 (30228): Disabling Drag and Drop Support for VM.
2025-10-10 07:43:22 (30228): Adding storage controller(s) to VM.
2025-10-10 07:43:22 (30228): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 07:43:23 (30228): Adding VirtualBox Guest Additions to VM.
2025-10-10 07:43:23 (30228): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 07:43:23 (30228): forwarding host port 49940 to guest port 80
2025-10-10 07:43:24 (30228): Enabling remote desktop for VM.
2025-10-10 07:43:24 (30228): Required extension pack not installed, remote desktop not enabled.
2025-10-10 07:43:24 (30228): Enabling shared directory for VM.
2025-10-10 07:43:24 (30228): Starting VM using VBoxManage interface. (boinc_0f6898f561086d04, slot#3)
2025-10-10 07:43:29 (30228): Successfully started VM. (PID = '30544')
2025-10-10 07:43:29 (30228): Reporting VM Process ID to BOINC.
2025-10-10 07:43:29 (30228): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-10 07:43:29 (30228): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 07:43:29 (30228): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 07:43:29 (30228): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 07:43:29 (30228): Detected: Web Application Enabled (http://localhost:49940)
2025-10-10 07:43:29 (30228): Preference change detected
2025-10-10 07:43:29 (30228): Setting CPU throttle for VM. (100%)
2025-10-10 07:43:29 (30228): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 07:43:31 (30228): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 07:43:31 (30228): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 07:43:34 (30228): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 07:43:34 (30228): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 07:43:34 (30228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 07:43:41 (30228): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 07:43:41 (30228): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-10 07:43:51 (30228): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 07:43:51 (30228): Guest Log: 00:00:00.000229 main     Log opened 2025-10-10T07:43:50.233856000Z
2025-10-10 07:43:51 (30228): Guest Log: 00:00:00.000341 main     OS Product: Linux
2025-10-10 07:43:51 (30228): Guest Log: 00:00:00.000387 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 07:43:51 (30228): Guest Log: 00:00:00.000428 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 07:43:51 (30228): Guest Log: 00:00:00.000472 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 07:43:51 (30228): Guest Log: 00:00:00.000473 main     Process ID: 1374
2025-10-10 07:43:51 (30228): Guest Log: 00:00:00.000474 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 07:43:51 (30228): Guest Log: 00:00:00.001652 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 07:43:51 (30228): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 07:43:51 (30228): Guest Log: [INFO] Mounting shared directory
2025-10-10 07:43:51 (30228): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 07:44:01 (30228): Guest Log: 00:00:10.006685 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 412 275 000ns (GuestNow=1 760 075 040 825 491 000 ns GuestLast=1 760 082 230 237 766 000 ns fSetTimeLastLoop=true )
2025-10-10 07:44:22 (30228): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 07:44:22 (30228): Guest Log: [INFO] Detected branch: prod
2025-10-10 07:44:23 (30228): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 07:44:23 (30228): Guest Log: Copying input files
2025-10-10 07:44:25 (30228): Guest Log: Copied input files into RunAtlas.
2025-10-10 07:44:25 (30228): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 07:44:25 (30228): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 07:44:25 (30228): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 07:44:25 (30228): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 07:44:49 (30228): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 07:44:49 (30228): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 07:44:49 (30228): Guest Log: 2.6.3.0 1673 0 32168 151535 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 07:44:50 (30228): Guest Log: copied the webapp to /var/www
2025-10-10 07:44:51 (30228): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-10 07:44:51 (30228): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-10 07:44:51 (30228): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 07:44:51 (30228): Guest Log:  *** Starting ATLAS job. (PandaID=6837364005 taskID=46676269) ***
2025-10-10 09:23:43 (30228): Status Report: Elapsed Time: '6000.000000'
2025-10-10 09:23:43 (30228): Status Report: CPU Time: '23681.515625'
2025-10-10 11:03:58 (30228): Status Report: Elapsed Time: '12000.000000'
2025-10-10 11:03:58 (30228): Status Report: CPU Time: '50556.703125'
2025-10-10 12:44:23 (30228): Status Report: Elapsed Time: '18000.000000'
2025-10-10 12:44:23 (30228): Status Report: CPU Time: '87384.484375'
2025-10-10 13:20:23 (30228): Guest Log:  *** Job finished ***
2025-10-10 13:20:23 (30228): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:19:31,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:19:35,550 | INFO     | [data] queue_monitor thread has finished
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:15,238 | INFO     | [monitor] cgroup control has ended
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:16,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045952579392)>', '<ExcThread(monitor, started 140045344282368)>']
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:17,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:17,084 | INFO     | [monitor] control thread has ended
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,363 | INFO     | all workflow threads have been joined
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,363 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,364 | INFO     | traces error code: 0
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,509 [wrapper] ==== pilot stdout END ====
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,517 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,523 [wrapper] pilotpid: 6097
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,530 [wrapper] Pilot exit status: 0
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,612 [wrapper] pandaids: 6837364005
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,696 [wrapper] cleanup supervisor_pilot 22133 6098
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,704 [wrapper] Test setup, not cleaning
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,712 [wrapper] apfmon messages muted
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,720 [wrapper] ==== wrapper stdout END ====
2025-10-10 13:20:23 (30228): Guest Log: 2025-10-10 11:20:21,728 [wrapper] ==== wrapper stderr END ====
2025-10-10 13:20:23 (30228): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 13:20:23 (30228): Guest Log:     "exeErrorCode": 0,
2025-10-10 13:20:23 (30228): Guest Log:     "exeErrorDiag": "",
2025-10-10 13:20:23 (30228): Guest Log:     "pilotErrorCode": 0,
2025-10-10 13:20:23 (30228): Guest Log:     "pilotErrorDiag": "",
2025-10-10 13:20:23 (30228): Guest Log:  *** Listing of results directory ***
2025-10-10 13:20:23 (30228): Guest Log: total 206984
2025-10-10 13:20:23 (30228): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 21:11 pilot3.tar.gz
2025-10-10 13:20:23 (30228): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 21:24 queuedata.json
2025-10-10 13:20:23 (30228): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 21:24 runpilot2-wrapper.sh
2025-10-10 13:20:23 (30228): Guest Log: -rwxr-xr-x. 1 atlas atlas      8774 Oct 10 05:44 init_data.xml
2025-10-10 13:20:23 (30228): Guest Log: -rwxr-xr-x. 1 atlas atlas    569680 Oct 10 05:44 input.tar.gz
2025-10-10 13:20:23 (30228): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 05:44 start_atlas.sh
2025-10-10 13:20:23 (30228): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 05:44 EVNT.46676267._001116.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 13:20:23 (30228): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 10 05:44 pandaJob.out
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas    975446 Oct 10 05:45 agis_schedconf.cvmfs.json
2025-10-10 13:20:23 (30228): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 05:45 pilot3
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas 202072386 Oct 10 11:18 HITS.46676269._026513.pool.root.1
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 11:18 pilot_heartbeat.json
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas      1048 Oct 10 11:18 memory_monitor_summary.json
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 11:19 agis_ddmendpoints.agis.ALL.json
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas    519208 Oct 10 11:19 log.46676269._026513.job.log.tgz.1
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas      7842 Oct 10 11:19 heartbeat.json
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas      4798 Oct 10 11:20 pilotlog.txt
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas   2499259 Oct 10 11:20 log.46676269._026513.job.log.1
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 11:20 output.list
2025-10-10 13:20:23 (30228): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 11:20 runtime_log
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas   3041280 Oct 10 11:20 result.tar.gz
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas       663 Oct 10 11:20 XYwLDm0IDR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPObNDm1iy3fm.diag
2025-10-10 13:20:23 (30228): Guest Log: -rw-r--r--. 1 atlas atlas      8646 Oct 10 11:20 runtime_log.err
2025-10-10 13:20:23 (30228): Guest Log: Looking for outputfile HITS.46676269._026513.pool.root.1
2025-10-10 13:20:23 (30228): Guest Log: HITS file was successfully produced
2025-10-10 13:20:23 (30228): Guest Log: -rw-------. 1 atlas atlas 202072386 Oct 10 11:18 /home/atlas/RunAtlas/HITS.46676269._026513.pool.root.1
2025-10-10 13:20:25 (30228): Guest Log: Successfully finished the ATLAS job!
2025-10-10 13:20:25 (30228): Guest Log: Copying the results back to the shared directory!
2025-10-10 13:20:26 (30228): Guest Log:  *** Contents of shared directory: ***
2025-10-10 13:20:27 (30228): Guest Log: total 416284
2025-10-10 13:20:27 (30228): Guest Log: -rwxrwxrwx. 1 root root 220552380 Oct 10 05:43 ATLAS.root_0
2025-10-10 13:20:27 (30228): Guest Log: -rwxrwxrwx. 1 root root 202072386 Oct 10 11:20 HITS.pool.root.1
2025-10-10 13:20:27 (30228): Guest Log: -rwxrwxrwx. 1 root root      8774 Oct 10 05:43 init_data.xml
2025-10-10 13:20:27 (30228): Guest Log: -rwxrwxrwx. 1 root root    569680 Oct  9 23:49 input.tar.gz
2025-10-10 13:20:27 (30228): Guest Log: -rwxrwxrwx. 1 root root   3041280 Oct 10 11:20 result.tar.gz
2025-10-10 13:20:27 (30228): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 23:49 start_atlas.sh
2025-10-10 13:20:27 (30228): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 13:20:27 (30228): VM Completion File Detected.
2025-10-10 13:20:27 (30228): Powering off VM.
2025-10-10 13:20:29 (30228): Successfully stopped VM.
2025-10-10 13:20:29 (30228): Deregistering VM. (boinc_0f6898f561086d04, slot#3)
2025-10-10 13:20:30 (30228): Removing network bandwidth throttle group from VM.
2025-10-10 13:20:32 (30228): Removing VM from VirtualBox.
2025-10-10 13:20:37 (30228): called boinc_finish(0)

</stderr_txt>
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