Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:48 (2410620): wrapper (7.7.26015): starting
00:02:48 (2410620): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:02:48] Arguments: --nthreads 9
[2025-10-10 00:02:48] Threads: 9
[2025-10-10 00:02:48] Checking for CVMFS
[2025-10-10 00:02:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:02:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:02:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:02:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:02:51] 2.13.2.0 5698 2095 133576 151533 3 235 17702546 32935936 22607 16776704 0 5776483 99.557 6279236 26403 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 00:02:51] CVMFS is ok
[2025-10-10 00:02:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:02:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:02:51] Further information can be found at the LHC@home message board.
[2025-10-10 00:02:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:02:51] Checking for apptainer binary...
[2025-10-10 00:02:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:02:51] Running /usr/bin/apptainer --version
[2025-10-10 00:02:51] apptainer version 1.4.3-1.el9
[2025-10-10 00:02:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:02:53] c-6-4.aglt2.org
[2025-10-10 00:02:53] apptainer works
[2025-10-10 00:02:53] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:02:53] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:02:53] Starting ATLAS job with PandaID=6837358147
[2025-10-10 00:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:58:31]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:58:31] 2025-10-10 22:57:42,381 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 18:58:31] 2025-10-10 22:57:42,441 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.176000000002
[2025-10-10 18:58:31] 2025-10-10 22:57:42,449 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837358147/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 18:58:31] 2025-10-10 22:57:42,450 | INFO     | extracted standard info from prmon json
[2025-10-10 18:58:31] 2025-10-10 22:57:42,450 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 18:58:31] 2025-10-10 22:57:42,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 18:58:31] 2025-10-10 22:57:42,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 18:58:31] 2025-10-10 22:57:42,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 18:58:31] 2025-10-10 22:57:42,565 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:58:31] 2025-10-10 22:57:42,588 | INFO     | sum of square deviations: 426370347297.6326
[2025-10-10 18:58:31] 2025-10-10 22:57:43,050 | INFO     | sum of deviations: 837337084920.5763
[2025-10-10 18:58:31] 2025-10-10 22:57:43,050 | INFO     | mean x: 1760103073.7850718
[2025-10-10 18:58:31] 2025-10-10 22:57:43,050 | INFO     | mean y: 2059512.1070143885
[2025-10-10 18:58:31] 2025-10-10 22:57:43,050 | INFO     | -- intersect: -3454558862.7494707
[2025-10-10 18:58:31] 2025-10-10 22:57:43,051 | INFO     | intersect: -3454558862.7494707
[2025-10-10 18:58:31] 2025-10-10 22:57:43,052 | INFO     | chi2: 9.015433918192544
[2025-10-10 18:58:31] 2025-10-10 22:57:43,059 | INFO     | sum of square deviations: 420644724609.79596
[2025-10-10 18:58:31] 2025-10-10 22:57:43,096 | INFO     | time since job start (68021s) is within the limit (172800.0s)
[2025-10-10 18:58:31] 2025-10-10 22:57:43,245 | INFO     | sum of deviations: 959346703787.5989
[2025-10-10 18:58:31] 2025-10-10 22:57:43,245 | INFO     | mean x: 1760102921.2854562
[2025-10-10 18:58:31] 2025-10-10 22:57:43,245 | INFO     | mean y: 2062753.0930442638
[2025-10-10 18:58:31] 2025-10-10 22:57:43,245 | INFO     | -- intersect: -4012129835.2687383
[2025-10-10 18:58:31] 2025-10-10 22:57:43,245 | INFO     | intersect: -4012129835.2687383
[2025-10-10 18:58:31] 2025-10-10 22:57:43,247 | INFO     | chi2: 7.468684110287898
[2025-10-10 18:58:31] 2025-10-10 22:57:43,247 | INFO     | current chi2=7.468684110287898 (change=17.156687320212157 %)
[2025-10-10 18:58:31] 2025-10-10 22:57:43,247 | INFO     | right removable region: 1106
[2025-10-10 18:58:31] 2025-10-10 22:57:43,248 | INFO     | sum of square deviations: 420644599072.2241
[2025-10-10 18:58:31] 2025-10-10 22:57:43,313 | INFO     | sum of deviations: 571978650024.9666
[2025-10-10 18:58:31] 2025-10-10 22:57:43,313 | INFO     | mean x: 1760103226.2863595
[2025-10-10 18:58:31] 2025-10-10 22:57:43,313 | INFO     | mean y: 2066576.8455284552
[2025-10-10 18:58:31] 2025-10-10 22:57:43,314 | INFO     | -- intersect: -2391263729.7751536
[2025-10-10 18:58:31] 2025-10-10 22:57:43,314 | INFO     | intersect: -2391263729.7751536
[2025-10-10 18:58:31] 2025-10-10 22:57:43,379 | INFO     | chi2: 5.9833652772775245
[2025-10-10 18:58:31] 2025-10-10 22:57:43,380 | INFO     | current chi2=5.9833652772775245 (change=33.63197676815652 %)
[2025-10-10 18:58:31] 2025-10-10 22:57:43,381 | INFO     | sum of square deviations: 414970542764.03046
[2025-10-10 18:58:31] 2025-10-10 22:57:43,676 | INFO     | sum of deviations: 393849609650.11835
[2025-10-10 18:58:31] 2025-10-10 22:57:43,676 | INFO     | mean x: 1760103378.7849364
[2025-10-10 18:58:31] 2025-10-10 22:57:43,677 | INFO     | mean y: 2071363.055353902
[2025-10-10 18:58:31] 2025-10-10 22:57:43,677 | INFO     | -- intersect: -1668447281.6198494
[2025-10-10 18:58:31] 2025-10-10 22:57:43,677 | INFO     | intersect: -1668447281.6198494
[2025-10-10 18:58:31] 2025-10-10 22:57:43,678 | INFO     | chi2: 4.67448156263122
[2025-10-10 18:58:31] 2025-10-10 22:57:43,678 | INFO     | current chi2=4.67448156263122 (change=21.875377049382756 %)
[2025-10-10 18:58:31] 2025-10-10 22:57:43,679 | INFO     | left removable region: 20
[2025-10-10 18:58:31] 2025-10-10 22:57:43,680 | INFO     | sum of square deviations: 397156915705.842
[2025-10-10 18:58:31] 2025-10-10 22:57:43,741 | INFO     | sum of deviations: 250662420732.95374
[2025-10-10 18:58:31] 2025-10-10 22:57:43,741 | INFO     | mean x: 1760103500.780847
[2025-10-10 18:58:31] 2025-10-10 22:57:43,741 | INFO     | mean y: 2082226.1804788213
[2025-10-10 18:58:31] 2025-10-10 22:57:43,741 | INFO     | -- intersect: -1108793064.665637
[2025-10-10 18:58:31] 2025-10-10 22:57:43,741 | INFO     | intersect: -1108793064.665637
[2025-10-10 18:58:31] 2025-10-10 22:57:43,743 | INFO     | chi2: 1.6050585959755312
[2025-10-10 18:58:31] 2025-10-10 22:57:43,743 | INFO     | -- intersect: -1108793064.665637
[2025-10-10 18:58:31] 2025-10-10 22:57:43,743 | INFO     | current memory leak: 0.63 B/s (using 1086 data points, chi2=1.61)
[2025-10-10 18:58:31] 2025-10-10 22:57:43,745 | INFO     | could have reported an average CPU frequency of 2600 MHz (40 samples)
[2025-10-10 18:58:31] 2025-10-10 22:57:43,745 | INFO     | ..............................
[2025-10-10 18:58:31] 2025-10-10 22:57:43,745 | INFO     | . Timing measurements:
[2025-10-10 18:58:31] 2025-10-10 22:57:43,745 | INFO     | . get job = 0 s
[2025-10-10 18:58:31] 2025-10-10 22:57:43,745 | INFO     | . initial setup = 5 s
[2025-10-10 18:58:31] 2025-10-10 22:57:43,745 | INFO     | . payload setup = 37 s
[2025-10-10 18:58:31] 2025-10-10 22:57:43,745 | INFO     | . stage-in = 0 s
[2025-10-10 18:58:31] 2025-10-10 22:57:43,746 | INFO     | . payload execution = 67838 s
[2025-10-10 18:58:31] 2025-10-10 22:57:43,746 | INFO     | . stage-out = 12 s
[2025-10-10 18:58:31] 2025-10-10 22:57:43,746 | INFO     | . log creation = 4 s
[2025-10-10 18:58:31] 2025-10-10 22:57:43,746 | INFO     | ..............................
[2025-10-10 18:58:31] 2025-10-10 22:57:45,117 | INFO     | 
[2025-10-10 18:58:31] 2025-10-10 22:57:45,117 | INFO     | job summary report
[2025-10-10 18:58:31] 2025-10-10 22:57:45,117 | INFO     | --------------------------------------------------
[2025-10-10 18:58:31] 2025-10-10 22:57:45,117 | INFO     | PanDA job id: 6837358147
[2025-10-10 18:58:31] 2025-10-10 22:57:45,117 | INFO     | task id: 46676269
[2025-10-10 18:58:31] 2025-10-10 22:57:45,117 | INFO     | errors: (none)
[2025-10-10 18:58:31] 2025-10-10 22:57:45,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | pilot state: finished 
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | transexitcode: 0
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | exeerrorcode: 0
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | exeerrordiag: 
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | exitcode: 0
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | exitmsg: OK
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | cpuconsumptiontime: 49345 s
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | nevents: 400
[2025-10-10 18:58:31] 2025-10-10 22:57:45,118 | INFO     | neventsw: 0
[2025-10-10 18:58:31] 2025-10-10 22:57:45,119 | INFO     | pid: 2449967
[2025-10-10 18:58:31] 2025-10-10 22:57:45,119 | INFO     | pgrp: 2449967
[2025-10-10 18:58:31] 2025-10-10 22:57:45,119 | INFO     | corecount: 9
[2025-10-10 18:58:31] 2025-10-10 22:57:45,119 | INFO     | event service: False
[2025-10-10 18:58:31] 2025-10-10 22:57:45,119 | INFO     | sizes: {0: 2348027, 1: 2348628, 2: 2348740, 4: 2348768, 5: 2348939, 16: 2348995, 27: 2349151, 37: 2349441, 39: 2349469, 67882: 2403730, 67884: 2403729, 67900: 2413
[2025-10-10 18:58:31] 2025-10-10 22:57:45,119 | INFO     | --------------------------------------------------
[2025-10-10 18:58:31] 2025-10-10 22:57:45,119 | INFO     | 
[2025-10-10 18:58:31] 2025-10-10 22:57:45,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 18:58:31] 2025-10-10 22:57:45,388 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,388 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,390 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:58:31] 2025-10-10 22:57:45,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,390 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:58:31] 2025-10-10 22:57:45,390 | INFO     | job 6837358147 has completed (purged errors)
[2025-10-10 18:58:31] 2025-10-10 22:57:45,473 | INFO     | overall cleanup function is called
[2025-10-10 18:58:31] 2025-10-10 22:57:46,545 | INFO     | --- collectZombieJob: --- 10, [2449967]
[2025-10-10 18:58:31] 2025-10-10 22:57:46,545 | INFO     | zombie collector waiting for pid 2449967
[2025-10-10 18:58:31] 2025-10-10 22:57:46,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:58:31] 2025-10-10 22:57:46,545 | INFO     | collected zombie processes
[2025-10-10 18:58:31] 2025-10-10 22:57:46,545 | INFO     | will attempt to kill all subprocesses of pid=2449967
[2025-10-10 18:58:31] 2025-10-10 22:57:50,388 | INFO     | PID=2424084 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 18:58:31] 2025-10-10 22:57:50,657 | INFO     | .. there are 40 such processes running
[2025-10-10 18:58:31] 2025-10-10 22:57:50,748 | INFO     | process IDs to be killed: [2449967] (in reverse order)
[2025-10-10 18:58:31] 2025-10-10 22:57:50,898 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:58:31] 2025-10-10 22:57:50,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:58:31] 2025-10-10 22:57:51,045 | INFO     | did not find any defunct processes belonging to 2449967
[2025-10-10 18:58:31] 2025-10-10 22:57:51,161 | INFO     | did not find any defunct processes belonging to 2449967
[2025-10-10 18:58:31] 2025-10-10 22:57:51,161 | INFO     | ready for new job
[2025-10-10 18:58:31] 2025-10-10 22:57:51,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:58:31] 2025-10-10 22:57:51,218 | INFO     | ***************************************
[2025-10-10 18:58:31] 2025-10-10 22:57:51,219 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 18:58:31] 2025-10-10 22:57:51,219 | INFO     | ***************************************
[2025-10-10 18:58:31] 2025-10-10 22:57:51,219 | INFO     | 
[2025-10-10 18:58:31] 2025-10-10 22:57:51,249 | INFO     | architecture information:
[2025-10-10 18:58:31] 2025-10-10 22:57:51,275 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:58:31] 2025-10-10 22:57:51,388 | INFO     | cat /etc/os-release:
[2025-10-10 18:58:31] NAME="CentOS Linux"
[2025-10-10 18:58:31] VERSION="7 (Core)"
[2025-10-10 18:58:31] ID="centos"
[2025-10-10 18:58:31] ID_LIKE="rhel fedora"
[2025-10-10 18:58:31] VERSION_ID="7"
[2025-10-10 18:58:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:58:31] ANSI_COLOR="0;31"
[2025-10-10 18:58:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:58:31] HOME_URL="https://www.centos.org/"
[2025-10-10 18:58:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:58:31] 
[2025-10-10 18:58:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:58:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:58:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:58:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:58:31] 
[2025-10-10 18:58:31] 2025-10-10 22:57:51,388 | INFO     | ***************************************
[2025-10-10 18:58:31] 2025-10-10 22:57:51,892 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 18:58:31] 2025-10-10 22:57:52,084 | INFO     | sufficient remaining disk space (75005689856 B)
[2025-10-10 18:58:31] 2025-10-10 22:57:52,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:58:31] 2025-10-10 22:57:52,085 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:58:31] 2025-10-10 22:57:52,085 | INFO     | update_server=False
[2025-10-10 18:58:31] 2025-10-10 22:57:52,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:58:31] 2025-10-10 22:57:52,382 | INFO     | all payload control threads have been joined
[2025-10-10 18:58:31] 2025-10-10 22:57:52,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:58:31] 2025-10-10 22:57:52,933 | INFO     | all job control threads have been joined
[2025-10-10 18:58:31] 2025-10-10 22:57:52,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:58:31] 2025-10-10 22:57:52,941 | INFO     | aborting loop
[2025-10-10 18:58:31] 2025-10-10 22:57:53,091 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:53,132 | INFO     | all data control threads have been joined
[2025-10-10 18:58:31] 2025-10-10 22:57:53,248 | INFO     | [job] validate thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:53,259 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:53,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:53,321 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:53,389 | INFO     | [payload] control thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:53,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:58:31] 2025-10-10 22:57:53,943 | INFO     | [job] control thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:53,956 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:54,155 | INFO     | [data] control thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:54,189 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:54,360 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:54,566 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:54,586 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:54,656 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:54,940 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:57:55,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:58:31] 2025-10-10 22:57:59,222 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:58:31] 2025-10-10 22:58:05,940 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:58:31] 2025-10-10 22:58:06,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855573243712)>', '<ExcThread(monitor, started 139855291975424)>']
[2025-10-10 18:58:31] 2025-10-10 22:58:11,109 | INFO     | all workflow threads have been joined
[2025-10-10 18:58:31] 2025-10-10 22:58:11,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:58:31] 2025-10-10 22:58:11,110 | INFO     | traces error code: 0
[2025-10-10 18:58:31] 2025-10-10 22:58:11,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:58:31] 2025-10-10 22:58:28,460 | INFO     | PID=2424084 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 18:58:31] 2025-10-10 22:58:28,507 | INFO     | .. there are 40 such processes running
[2025-10-10 18:58:31] 2025-10-10 22:58:28,507 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:58:31] 2025-10-10 22:58:28,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:58:31] 2025-10-10 22:58:28,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:58:31] 2025-10-10 22:58:28,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:58:31] 2025-10-10 22:58:28,507 | INFO     | [monitor] control thread has ended
[2025-10-10 18:58:31] 2025-10-10 22:58:29,551 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:58:31] 2025-10-10 22:58:29,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:58:31] 2025-10-10 22:58:29,630 [wrapper] pilotpid: 2424084
[2025-10-10 18:58:31] 2025-10-10 22:58:29,649 [wrapper] Pilot exit status: 0
[2025-10-10 18:58:31] 2025-10-10 22:58:29,825 [wrapper] pandaids: 6837358147
[2025-10-10 18:58:31] 2025-10-10 22:58:30,919 [wrapper] cleanup supervisor_pilot 1472028 2424085
[2025-10-10 18:58:31] 2025-10-10 22:58:30,932 [wrapper] Test setup, not cleaning
[2025-10-10 18:58:31] 2025-10-10 22:58:30,964 [wrapper] apfmon messages muted
[2025-10-10 18:58:31] 2025-10-10 22:58:30,976 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:58:31] 2025-10-10 22:58:31,021 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:58:31]  *** Error codes and diagnostics ***
[2025-10-10 18:58:31]     "exeErrorCode": 0,
[2025-10-10 18:58:31]     "exeErrorDiag": "",
[2025-10-10 18:58:31]     "pilotErrorCode": 0,
[2025-10-10 18:58:31]     "pilotErrorDiag": "",
[2025-10-10 18:58:31]  *** Listing of results directory ***
[2025-10-10 18:58:31] total 422360
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 14:06 pilot3.tar.gz
[2025-10-10 18:58:31] -rwx------. 1 boincer umatlas     36292 Oct  9 14:20 runpilot2-wrapper.sh
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 14:20 queuedata.json
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:58:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:02 run_atlas
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:02 job.xml
[2025-10-10 18:58:31] -rw-r--r--. 2 boincer umatlas 221395189 Oct 10 00:02 EVNT.46676267._000989.pool.root.1
[2025-10-10 18:58:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:02 start_atlas.sh
[2025-10-10 18:58:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:02 shared
[2025-10-10 18:58:31] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 00:02 input.tar.gz
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:02 boinc_lockfile
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 00:02 pandaJob.out
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas    975454 Oct 10 00:03 agis_schedconf.cvmfs.json
[2025-10-10 18:58:31] drwx------. 5 boincer umatlas      4096 Oct 10 00:04 pilot3
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas      6654 Oct 10 18:54 init_data.xml
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas 188893508 Oct 10 18:54 HITS.46676269._024109.pool.root.1
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas       531 Oct 10 18:54 boinc_task_state.xml
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas      1056 Oct 10 18:56 memory_monitor_summary.json
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas   1560580 Oct 10 18:56 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas   1137756 Oct 10 18:56 log.46676269._024109.job.log.tgz.1
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas        95 Oct 10 18:57 pilot_heartbeat.json
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas      7827 Oct 10 18:57 heartbeat.json
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas       823 Oct 10 18:58 pilotlog.txt
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas        28 Oct 10 18:58 wrapper_checkpoint.txt
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas   8018888 Oct 10 18:58 log.46676269._024109.job.log.1
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas       357 Oct 10 18:58 output.list
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas       620 Oct 10 18:58 runtime_log
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas   9175040 Oct 10 18:58 result.tar.gz
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas      8689 Oct 10 18:58 runtime_log.err
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas       655 Oct 10 18:58 4LEMDmjQAR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjVOMDmHviUDo.diag
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 18:58 boinc_mmap_file
[2025-10-10 18:58:31] -rw-r--r--. 1 boincer umatlas     21312 Oct 10 18:58 stderr.txt
[2025-10-10 18:58:31] HITS file was successfully produced:
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas 188893508 Oct 10 18:54 shared/HITS.pool.root.1
[2025-10-10 18:58:31]  *** Contents of shared directory: ***
[2025-10-10 18:58:31] total 410216
[2025-10-10 18:58:31] -rw-r--r--. 2 boincer umatlas 221395189 Oct 10 00:02 ATLAS.root_0
[2025-10-10 18:58:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:02 start_atlas.sh
[2025-10-10 18:58:31] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 00:02 input.tar.gz
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas 188893508 Oct 10 18:54 HITS.pool.root.1
[2025-10-10 18:58:31] -rw-------. 1 boincer umatlas   9175040 Oct 10 18:58 result.tar.gz
18:58:53 (2410620): run_atlas exited; CPU time 52422.027066
18:58:53 (2410620): called boinc_finish(0)

</stderr_txt>
]]>

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