Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:49:38 (2157818): wrapper (7.7.26015): starting
07:49:38 (2157818): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 07:49:38] Arguments: --nthreads 4
[2025-10-10 07:49:38] Threads: 4
[2025-10-10 07:49:38] Checking for CVMFS
[2025-10-10 07:49:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 07:49:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 07:49:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 07:49:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 07:49:38] 2.9.2.0 1857307 864 82152 151535 1 57 29150030 36864000 0 130560 0 785693 99.990 29312 905 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 07:49:38] CVMFS is ok
[2025-10-10 07:49:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 07:49:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 07:49:38] Further information can be found at the LHC@home message board.
[2025-10-10 07:49:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 07:49:38] Checking for apptainer binary...
[2025-10-10 07:49:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 07:49:38] Running /usr/bin/apptainer --version
[2025-10-10 07:49:38] apptainer version 1.4.1-1.1
[2025-10-10 07:49:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 07:49:38] thA319a
[2025-10-10 07:49:38] apptainer works
[2025-10-10 07:49:38] Set ATHENA_PROC_NUMBER=4
[2025-10-10 07:49:38] Set ATHENA_CORE_NUMBER=4
[2025-10-10 07:49:38] Starting ATLAS job with PandaID=6837350300
[2025-10-10 07:49:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 09:04:59]  *** The last 200 lines of the pilot log: ***
[2025-10-10 09:04:59] 2025-10-10 07:03:54,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 09:04:59] 2025-10-10 07:03:54,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 09:04:59] 2025-10-10 07:03:54,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 09:04:59] 2025-10-10 07:03:54,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 09:04:59] 2025-10-10 07:03:54,931 | INFO     | aborting loop
[2025-10-10 09:04:59] 2025-10-10 07:03:54,970 | INFO     | all data control threads have been joined
[2025-10-10 09:04:59] 2025-10-10 07:03:55,410 | INFO     | [job] retrieve thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:55,411 | INFO     | [job] queue monitor thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:55,584 | INFO     | all payload control threads have been joined
[2025-10-10 09:04:59] 2025-10-10 07:03:55,807 | INFO     | all job control threads have been joined
[2025-10-10 09:04:59] 2025-10-10 07:03:55,930 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:55,930 | INFO     | [job] validate thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:55,936 | INFO     | [job] job monitor thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:55,954 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:55,975 | INFO     | [data] control thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:56,066 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:56,275 | INFO     | [payload] failed_post thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:56,411 | INFO     | [data] copytool_out thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:56,589 | INFO     | [payload] control thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:56,614 | INFO     | [data] copytool_in thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:56,813 | INFO     | [job] control thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:56,861 | INFO     | [payload] validate_post thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:03:58,878 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:04:04,696 | INFO     | job.realtimelogging is not enabled
[2025-10-10 09:04:59] 2025-10-10 07:04:05,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 09:04:59] 2025-10-10 07:04:24,167 | INFO     | PID=2161614 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 09:04:59] 2025-10-10 07:04:24,167 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 09:04:59] 2025-10-10 07:04:24,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 09:04:59] 2025-10-10 07:04:24,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 09:04:59] 2025-10-10 07:04:44,999 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-10 09:04:59] 2025-10-10 07:04:52,336 | INFO     | [monitor] cgroup control has ended
[2025-10-10 09:04:59] 2025-10-10 07:04:54,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632207374144)>', '<ExcThread(monitor, started 140631104018176)>']
[2025-10-10 09:04:59] 2025-10-10 07:04:55,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 09:04:59] 2025-10-10 07:04:55,334 | INFO     | [monitor] control thread has ended
[2025-10-10 09:04:59] 2025-10-10 07:04:59,376 | INFO     | all workflow threads have been joined
[2025-10-10 09:04:59] 2025-10-10 07:04:59,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 09:04:59] 2025-10-10 07:04:59,377 | INFO     | traces error code: 0
[2025-10-10 09:04:59] 2025-10-10 07:04:59,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 09:04:59] 2025-10-10 07:04:59,457 [wrapper] ==== pilot stdout END ====
[2025-10-10 09:04:59] 2025-10-10 07:04:59,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 09:04:59] 2025-10-10 07:04:59,466 [wrapper] pilotpid: 2161614
[2025-10-10 09:04:59] 2025-10-10 07:04:59,470 [wrapper] Pilot exit status: 0
[2025-10-10 09:04:59] 2025-10-10 07:04:59,481 [wrapper] pandaids: 6837350300
[2025-10-10 09:04:59] 2025-10-10 07:04:59,504 [wrapper] cleanup supervisor_pilot 2182879 2161615
[2025-10-10 09:04:59] 2025-10-10 07:04:59,508 [wrapper] Test setup, not cleaning
[2025-10-10 09:04:59] 2025-10-10 07:04:59,512 [wrapper] apfmon messages muted
[2025-10-10 09:04:59] 2025-10-10 07:04:59,516 [wrapper] ==== wrapper stdout END ====
[2025-10-10 09:04:59] 2025-10-10 07:04:59,519 [wrapper] ==== wrapper stderr END ====
[2025-10-10 09:04:59]  *** Error codes and diagnostics ***
[2025-10-10 09:04:59]     "exeErrorCode": 0,
[2025-10-10 09:04:59]     "exeErrorDiag": "",
[2025-10-10 09:04:59]     "pilotErrorCode": 0,
[2025-10-10 09:04:59]     "pilotErrorDiag": "",
[2025-10-10 09:04:59]  *** Listing of results directory ***
[2025-10-10 09:04:59] total 412080
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc    557409 Oct  9 17:29 pilot3.tar.gz
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc      5112 Oct  9 17:43 queuedata.json
[2025-10-10 09:04:59] -rwx------ 1 boinc boinc     36292 Oct  9 17:44 runpilot2-wrapper.sh
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc       100 Oct 10 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 09:04:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 07:49 run_atlas
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc       105 Oct 10 07:49 job.xml
[2025-10-10 09:04:59] -rw-r--r-- 2 boinc boinc 222341487 Oct 10 07:49 EVNT.46676267._000444.pool.root.1
[2025-10-10 09:04:59] drwxrwx--x 2 boinc boinc      4096 Oct 10 07:49 shared
[2025-10-10 09:04:59] -rw-r--r-- 2 boinc boinc    569678 Oct 10 07:49 input.tar.gz
[2025-10-10 09:04:59] -rw-r--r-- 2 boinc boinc     15120 Oct 10 07:49 start_atlas.sh
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc         0 Oct 10 07:49 boinc_setup_complete
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc      6367 Oct 10 07:49 init_data.xml
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc         0 Oct 10 07:49 boinc_lockfile
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc      2549 Oct 10 07:49 pandaJob.out
[2025-10-10 09:04:59] -rw------- 1 boinc boinc    975446 Oct 10 07:49 agis_schedconf.cvmfs.json
[2025-10-10 09:04:59] -rw------- 1 boinc boinc   1560580 Oct 10 07:49 agis_ddmendpoints.agis.ALL.json
[2025-10-10 09:04:59] drwx------ 5 boinc boinc      4096 Oct 10 07:49 pilot3
[2025-10-10 09:04:59] -rw------- 1 boinc boinc 193892797 Oct 10 09:03 HITS.46676269._021667.pool.root.1
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc       529 Oct 10 09:03 boinc_task_state.xml
[2025-10-10 09:04:59] -rw------- 1 boinc boinc      1022 Oct 10 09:03 memory_monitor_summary.json
[2025-10-10 09:04:59] -rw------- 1 boinc boinc    263760 Oct 10 09:03 log.46676269._021667.job.log.tgz.1
[2025-10-10 09:04:59] -rw------- 1 boinc boinc      7761 Oct 10 09:03 heartbeat.json
[2025-10-10 09:04:59] -rw------- 1 boinc boinc        95 Oct 10 09:04 pilot_heartbeat.json
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc        27 Oct 10 09:04 wrapper_checkpoint.txt
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc      8192 Oct 10 09:04 boinc_mmap_file
[2025-10-10 09:04:59] -rw------- 1 boinc boinc      4824 Oct 10 09:04 pilotlog.txt
[2025-10-10 09:04:59] -rw------- 1 boinc boinc    658717 Oct 10 09:04 log.46676269._021667.job.log.1
[2025-10-10 09:04:59] -rw------- 1 boinc boinc       357 Oct 10 09:04 output.list
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc       620 Oct 10 09:04 runtime_log
[2025-10-10 09:04:59] -rw------- 1 boinc boinc    942080 Oct 10 09:04 result.tar.gz
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc      8782 Oct 10 09:04 runtime_log.err
[2025-10-10 09:04:59] -rw------- 1 boinc boinc       659 Oct 10 09:04 AFNNDmwz7Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxcaNDmy5RQun.diag
[2025-10-10 09:04:59] -rw-r--r-- 1 boinc boinc      7386 Oct 10 09:04 stderr.txt
[2025-10-10 09:04:59] HITS file was successfully produced:
[2025-10-10 09:04:59] -rw------- 1 boinc boinc 193892797 Oct 10 09:03 shared/HITS.pool.root.1
[2025-10-10 09:04:59]  *** Contents of shared directory: ***
[2025-10-10 09:04:59] total 407988
[2025-10-10 09:04:59] -rw-r--r-- 2 boinc boinc 222341487 Oct 10 07:49 ATLAS.root_0
[2025-10-10 09:04:59] -rw-r--r-- 2 boinc boinc    569678 Oct 10 07:49 input.tar.gz
[2025-10-10 09:04:59] -rw-r--r-- 2 boinc boinc     15120 Oct 10 07:49 start_atlas.sh
[2025-10-10 09:04:59] -rw------- 1 boinc boinc 193892797 Oct 10 09:03 HITS.pool.root.1
[2025-10-10 09:04:59] -rw------- 1 boinc boinc    942080 Oct 10 09:04 result.tar.gz
09:05:01 (2157818): run_atlas exited; CPU time 16671.350814
09:05:01 (2157818): called boinc_finish(0)

</stderr_txt>
]]>

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