Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:32:33 (19444): wrapper (7.7.26015): starting
19:32:33 (19444): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 19:32:33] Arguments: --nthreads 8
[2025-10-09 19:32:33] Threads: 8
[2025-10-09 19:32:33] Checking for CVMFS
[2025-10-09 19:32:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 19:32:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 19:32:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 19:32:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 19:32:33] 2.11.2.0 2831 219226 77680 151527 1 57 20047007 20275201 1 130560 2 74232782 99.977 13946277 11981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 19:32:33] CVMFS is ok
[2025-10-09 19:32:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 19:32:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 19:32:33] Further information can be found at the LHC@home message board.
[2025-10-09 19:32:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 19:32:33] Checking for apptainer binary...
[2025-10-09 19:32:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 19:32:33] Running /usr/bin/apptainer --version
[2025-10-09 19:32:33] apptainer version 1.3.2-1.el7
[2025-10-09 19:32:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 19:32:35] c-204-40.aglt2.org
[2025-10-09 19:32:35] apptainer works
[2025-10-09 19:32:35] Set ATHENA_PROC_NUMBER=8
[2025-10-09 19:32:35] Set ATHENA_CORE_NUMBER=8
[2025-10-09 19:32:35] Starting ATLAS job with PandaID=6837328229
[2025-10-09 19:32:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 21:38:11]  *** The last 200 lines of the pilot log: ***
[2025-10-09 21:38:11] 2025-10-10 01:37:21,243 | INFO     | monitor loop #554: job 0:6837328229 is in state 'finished'
[2025-10-09 21:38:11] 2025-10-10 01:37:21,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:38:11] 2025-10-10 01:37:21,622 | INFO     | time since job start (7468s) is within the limit (172800.0s)
[2025-10-09 21:38:11] 2025-10-10 01:37:22,976 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 21:38:11] 2025-10-10 01:37:22,980 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2025-10-09 21:38:11] 2025-10-10 01:37:22,982 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837328229/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 21:38:11] 2025-10-10 01:37:22,983 | INFO     | extracted standard info from prmon json
[2025-10-09 21:38:11] 2025-10-10 01:37:22,983 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 21:38:11] 2025-10-10 01:37:22,984 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 21:38:11] 2025-10-10 01:37:22,984 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 21:38:11] 2025-10-10 01:37:22,984 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 21:38:11] 2025-10-10 01:37:22,988 | INFO     | fitting pss+swap vs Time
[2025-10-09 21:38:11] 2025-10-10 01:37:22,988 | INFO     | sum of square deviations: 563026370.5
[2025-10-09 21:38:11] 2025-10-10 01:37:22,989 | INFO     | sum of deviations: -3667440932.5000114
[2025-10-09 21:38:11] 2025-10-10 01:37:22,989 | INFO     | mean x: 1760056495.5
[2025-10-09 21:38:11] 2025-10-10 01:37:22,989 | INFO     | mean y: 2547386.12295082
[2025-10-09 21:38:11] 2025-10-10 01:37:22,989 | INFO     | -- intersect: 11467202637.309313
[2025-10-09 21:38:11] 2025-10-10 01:37:22,989 | INFO     | intersect: 11467202637.309313
[2025-10-09 21:38:11] 2025-10-10 01:37:22,990 | INFO     | chi2: 1.6197184072183313
[2025-10-09 21:38:11] 2025-10-10 01:37:22,990 | INFO     | sum of square deviations: 496597218.0
[2025-10-09 21:38:11] 2025-10-10 01:37:22,990 | INFO     | sum of deviations: -2873813333.999995
[2025-10-09 21:38:11] 2025-10-10 01:37:22,990 | INFO     | mean x: 1760056343.0
[2025-10-09 21:38:11] 2025-10-10 01:37:22,991 | INFO     | mean y: 2549209.128205128
[2025-10-09 21:38:11] 2025-10-10 01:37:22,991 | INFO     | -- intersect: 10188013814.579678
[2025-10-09 21:38:11] 2025-10-10 01:37:22,991 | INFO     | intersect: 10188013814.579678
[2025-10-09 21:38:11] 2025-10-10 01:37:22,991 | INFO     | chi2: 1.621298599867237
[2025-10-09 21:38:11] 2025-10-10 01:37:22,991 | INFO     | current chi2=1.621298599867237 (change=-0.09755971419868098 %)
[2025-10-09 21:38:11] 2025-10-10 01:37:22,991 | INFO     | right removable region: 116
[2025-10-09 21:38:11] 2025-10-10 01:37:22,992 | INFO     | sum of square deviations: 496597218.0
[2025-10-09 21:38:11] 2025-10-10 01:37:22,992 | INFO     | sum of deviations: -22124909839.999992
[2025-10-09 21:38:11] 2025-10-10 01:37:22,992 | INFO     | mean x: 1760056648.0
[2025-10-09 21:38:11] 2025-10-10 01:37:22,992 | INFO     | mean y: 2588972.094017094
[2025-10-09 21:38:11] 2025-10-10 01:37:22,993 | INFO     | -- intersect: 78418442381.67274
[2025-10-09 21:38:11] 2025-10-10 01:37:22,993 | INFO     | intersect: 78418442381.67274
[2025-10-09 21:38:11] 2025-10-10 01:37:22,993 | INFO     | chi2: 0.13406907146015962
[2025-10-09 21:38:11] 2025-10-10 01:37:22,993 | INFO     | current chi2=0.13406907146015962 (change=91.72269260738928 %)
[2025-10-09 21:38:11] 2025-10-10 01:37:22,993 | INFO     | sum of square deviations: 435610028.0
[2025-10-09 21:38:11] 2025-10-10 01:37:22,994 | INFO     | sum of deviations: -22128250443.999996
[2025-10-09 21:38:11] 2025-10-10 01:37:22,994 | INFO     | mean x: 1760056800.5
[2025-10-09 21:38:11] 2025-10-10 01:37:22,994 | INFO     | mean y: 2588841.4285714286
[2025-10-09 21:38:11] 2025-10-10 01:37:22,994 | INFO     | -- intersect: 89410488507.89203
[2025-10-09 21:38:11] 2025-10-10 01:37:22,994 | INFO     | intersect: 89410488507.89203
[2025-10-09 21:38:11] 2025-10-10 01:37:22,995 | INFO     | chi2: 0.10235891768145804
[2025-10-09 21:38:11] 2025-10-10 01:37:22,995 | INFO     | current chi2=0.10235891768145804 (change=23.65210218385429 %)
[2025-10-09 21:38:11] 2025-10-10 01:37:22,995 | INFO     | left removable region: 20
[2025-10-09 21:38:11] 2025-10-10 01:37:22,995 | INFO     | sum of square deviations: 274312120.0
[2025-10-09 21:38:11] 2025-10-10 01:37:22,995 | INFO     | sum of deviations: -14919252144.000002
[2025-10-09 21:38:11] 2025-10-10 01:37:22,996 | INFO     | mean x: 1760056922.5
[2025-10-09 21:38:11] 2025-10-10 01:37:22,996 | INFO     | mean y: 2575870.5833333335
[2025-10-09 21:38:11] 2025-10-10 01:37:22,996 | INFO     | -- intersect: 95728324388.62245
[2025-10-09 21:38:11] 2025-10-10 01:37:22,996 | INFO     | intersect: 95728324388.62245
[2025-10-09 21:38:11] 2025-10-10 01:37:22,996 | INFO     | chi2: 0.0945603016871898
[2025-10-09 21:38:11] 2025-10-10 01:37:22,996 | INFO     | -- intersect: 95728324388.62245
[2025-10-09 21:38:11] 2025-10-10 01:37:22,996 | INFO     | current memory leak: -54.39 B/s (using 96 data points, chi2=0.09)
[2025-10-09 21:38:11] 2025-10-10 01:37:22,997 | INFO     | could have reported an average CPU frequency of 1964 MHz (8 samples)
[2025-10-09 21:38:11] 2025-10-10 01:37:22,997 | INFO     | ..............................
[2025-10-09 21:38:11] 2025-10-10 01:37:22,997 | INFO     | . Timing measurements:
[2025-10-09 21:38:11] 2025-10-10 01:37:22,997 | INFO     | . get job = 0 s
[2025-10-09 21:38:11] 2025-10-10 01:37:22,997 | INFO     | . initial setup = 2 s
[2025-10-09 21:38:11] 2025-10-10 01:37:22,997 | INFO     | . payload setup = 8 s
[2025-10-09 21:38:11] 2025-10-10 01:37:22,998 | INFO     | . stage-in = 0 s
[2025-10-09 21:38:11] 2025-10-10 01:37:22,998 | INFO     | . payload execution = 7429 s
[2025-10-09 21:38:11] 2025-10-10 01:37:22,998 | INFO     | . stage-out = 0 s
[2025-10-09 21:38:11] 2025-10-10 01:37:22,998 | INFO     | . log creation = 0 s
[2025-10-09 21:38:11] 2025-10-10 01:37:22,998 | INFO     | ..............................
[2025-10-09 21:38:11] 2025-10-10 01:37:23,247 | INFO     | 
[2025-10-09 21:38:11] 2025-10-10 01:37:23,248 | INFO     | job summary report
[2025-10-09 21:38:11] 2025-10-10 01:37:23,248 | INFO     | --------------------------------------------------
[2025-10-09 21:38:11] 2025-10-10 01:37:23,248 | INFO     | PanDA job id: 6837328229
[2025-10-09 21:38:11] 2025-10-10 01:37:23,248 | INFO     | task id: 46676269
[2025-10-09 21:38:11] 2025-10-10 01:37:23,248 | INFO     | errors: (none)
[2025-10-09 21:38:11] 2025-10-10 01:37:23,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 21:38:11] 2025-10-10 01:37:23,249 | INFO     | pilot state: finished 
[2025-10-09 21:38:11] 2025-10-10 01:37:23,249 | INFO     | transexitcode: 0
[2025-10-09 21:38:11] 2025-10-10 01:37:23,249 | INFO     | exeerrorcode: 0
[2025-10-09 21:38:11] 2025-10-10 01:37:23,249 | INFO     | exeerrordiag: 
[2025-10-09 21:38:11] 2025-10-10 01:37:23,249 | INFO     | exitcode: 0
[2025-10-09 21:38:11] 2025-10-10 01:37:23,250 | INFO     | exitmsg: OK
[2025-10-09 21:38:11] 2025-10-10 01:37:23,250 | INFO     | cpuconsumptiontime: 55264 s
[2025-10-09 21:38:11] 2025-10-10 01:37:23,250 | INFO     | nevents: 400
[2025-10-09 21:38:11] 2025-10-10 01:37:23,250 | INFO     | neventsw: 0
[2025-10-09 21:38:11] 2025-10-10 01:37:23,250 | INFO     | pid: 29591
[2025-10-09 21:38:11] 2025-10-10 01:37:23,250 | INFO     | pgrp: 29591
[2025-10-09 21:38:11] 2025-10-10 01:37:23,251 | INFO     | corecount: 8
[2025-10-09 21:38:11] 2025-10-10 01:37:23,251 | INFO     | event service: False
[2025-10-09 21:38:11] 2025-10-10 01:37:23,251 | INFO     | sizes: {0: 2348685, 1: 2348884, 7: 2349146, 11: 2349174, 7441: 2376563, 7443: 2385561, 7445: 2385745, 7452: 2385939}
[2025-10-09 21:38:11] 2025-10-10 01:37:23,251 | INFO     | --------------------------------------------------
[2025-10-09 21:38:11] 2025-10-10 01:37:23,251 | INFO     | 
[2025-10-09 21:38:11] 2025-10-10 01:37:23,251 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 21:38:11] 2025-10-10 01:37:23,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,281 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,281 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 21:38:11] 2025-10-10 01:37:23,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 21:38:11] 2025-10-10 01:37:23,284 | INFO     | job 6837328229 has completed (purged errors)
[2025-10-09 21:38:11] 2025-10-10 01:37:23,285 | INFO     | overall cleanup function is called
[2025-10-09 21:38:11] 2025-10-10 01:37:24,293 | INFO     | --- collectZombieJob: --- 10, [29591]
[2025-10-09 21:38:11] 2025-10-10 01:37:24,293 | INFO     | zombie collector waiting for pid 29591
[2025-10-09 21:38:11] 2025-10-10 01:37:24,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 21:38:11] 2025-10-10 01:37:24,299 | INFO     | collected zombie processes
[2025-10-09 21:38:11] 2025-10-10 01:37:24,299 | INFO     | will attempt to kill all subprocesses of pid=29591
[2025-10-09 21:38:11] 2025-10-10 01:37:24,390 | INFO     | process IDs to be killed: [29591] (in reverse order)
[2025-10-09 21:38:11] 2025-10-10 01:37:24,449 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 21:38:11] 2025-10-10 01:37:24,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 21:38:11] 2025-10-10 01:37:24,454 | INFO     | did not find any defunct processes belonging to 29591
[2025-10-09 21:38:11] 2025-10-10 01:37:24,458 | INFO     | did not find any defunct processes belonging to 29591
[2025-10-09 21:38:11] 2025-10-10 01:37:24,458 | INFO     | ready for new job
[2025-10-09 21:38:11] 2025-10-10 01:37:24,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 21:38:11] 2025-10-10 01:37:24,460 | INFO     | ***************************************
[2025-10-09 21:38:11] 2025-10-10 01:37:24,460 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 21:38:11] 2025-10-10 01:37:24,460 | INFO     | ***************************************
[2025-10-09 21:38:11] 2025-10-10 01:37:24,460 | INFO     | 
[2025-10-09 21:38:11] 2025-10-10 01:37:24,461 | INFO     | architecture information:
[2025-10-09 21:38:11] 2025-10-10 01:37:24,462 | INFO     | executing command: cat /etc/os-release
[2025-10-09 21:38:11] 2025-10-10 01:37:24,479 | INFO     | cat /etc/os-release:
[2025-10-09 21:38:11] NAME="CentOS Linux"
[2025-10-09 21:38:11] VERSION="7 (Core)"
[2025-10-09 21:38:11] ID="centos"
[2025-10-09 21:38:11] ID_LIKE="rhel fedora"
[2025-10-09 21:38:11] VERSION_ID="7"
[2025-10-09 21:38:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 21:38:11] ANSI_COLOR="0;31"
[2025-10-09 21:38:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 21:38:11] HOME_URL="https://www.centos.org/"
[2025-10-09 21:38:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 21:38:11] 
[2025-10-09 21:38:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 21:38:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 21:38:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 21:38:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 21:38:11] 
[2025-10-09 21:38:11] 2025-10-10 01:37:24,480 | INFO     | ***************************************
[2025-10-09 21:38:11] 2025-10-10 01:37:24,983 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 21:38:11] 2025-10-10 01:37:25,001 | INFO     | sufficient remaining disk space (18559795200 B)
[2025-10-09 21:38:11] 2025-10-10 01:37:25,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 21:38:11] 2025-10-10 01:37:25,002 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 21:38:11] 2025-10-10 01:37:25,002 | INFO     | update_server=False
[2025-10-09 21:38:11] 2025-10-10 01:37:25,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 21:38:11] 2025-10-10 01:37:25,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 21:38:11] 2025-10-10 01:37:25,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:38:11] 2025-10-10 01:37:25,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:38:11] 2025-10-10 01:37:25,004 | INFO     | aborting loop
[2025-10-09 21:38:11] 2025-10-10 01:37:25,417 | INFO     | all job control threads have been joined
[2025-10-09 21:38:11] 2025-10-10 01:37:26,008 | INFO     | [job] retrieve thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:26,010 | INFO     | [job] queue monitor thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:26,010 | INFO     | [job] job monitor thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:26,087 | INFO     | all data control threads have been joined
[2025-10-09 21:38:11] 2025-10-10 01:37:26,258 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:26,277 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:26,290 | INFO     | [data] copytool_in thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:26,380 | INFO     | all payload control threads have been joined
[2025-10-09 21:38:11] 2025-10-10 01:37:26,423 | INFO     | [job] control thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:26,593 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:26,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 21:38:11] 2025-10-10 01:37:26,979 | INFO     | [payload] failed_post thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:27,009 | INFO     | [data] copytool_out thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:27,084 | INFO     | [job] validate thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:27,092 | INFO     | [data] control thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:27,384 | INFO     | [payload] control thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:27,583 | INFO     | [payload] validate_post thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:30,855 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:35,059 | INFO     | job.realtimelogging is not enabled
[2025-10-09 21:38:11] 2025-10-10 01:37:36,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 21:38:11] 2025-10-10 01:37:54,834 | INFO     | PID=23108 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 21:38:11] 2025-10-10 01:37:54,835 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 21:38:11] 2025-10-10 01:37:54,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 21:38:11] 2025-10-10 01:37:54,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 21:38:11] 2025-10-10 01:38:05,326 | INFO     | [monitor] cgroup control has ended
[2025-10-09 21:38:11] 2025-10-10 01:38:06,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639337699136)>', '<ExcThread(monitor, started 139638756853504)>']
[2025-10-09 21:38:11] 2025-10-10 01:38:06,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 21:38:11] 2025-10-10 01:38:06,890 | INFO     | [monitor] control thread has ended
[2025-10-09 21:38:11] 2025-10-10 01:38:11,131 | INFO     | all workflow threads have been joined
[2025-10-09 21:38:11] 2025-10-10 01:38:11,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 21:38:11] 2025-10-10 01:38:11,132 | INFO     | traces error code: 0
[2025-10-09 21:38:11] 2025-10-10 01:38:11,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 21:38:11] 2025-10-10 01:38:11,245 [wrapper] ==== pilot stdout END ====
[2025-10-09 21:38:11] 2025-10-10 01:38:11,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 21:38:11] 2025-10-10 01:38:11,255 [wrapper] pilotpid: 23108
[2025-10-09 21:38:11] 2025-10-10 01:38:11,259 [wrapper] Pilot exit status: 0
[2025-10-09 21:38:11] 2025-10-10 01:38:11,277 [wrapper] pandaids: 6837328229
[2025-10-09 21:38:11] 2025-10-10 01:38:11,331 [wrapper] cleanup supervisor_pilot 18420 23109
[2025-10-09 21:38:11] 2025-10-10 01:38:11,336 [wrapper] Test setup, not cleaning
[2025-10-09 21:38:11] 2025-10-10 01:38:11,341 [wrapper] apfmon messages muted
[2025-10-09 21:38:11] 2025-10-10 01:38:11,346 [wrapper] ==== wrapper stdout END ====
[2025-10-09 21:38:11] 2025-10-10 01:38:11,350 [wrapper] ==== wrapper stderr END ====
[2025-10-09 21:38:11]  *** Error codes and diagnostics ***
[2025-10-09 21:38:11]     "exeErrorCode": 0,
[2025-10-09 21:38:11]     "exeErrorDiag": "",
[2025-10-09 21:38:11]     "pilotErrorCode": 0,
[2025-10-09 21:38:11]     "pilotErrorDiag": "",
[2025-10-09 21:38:11]  *** Listing of results directory ***
[2025-10-09 21:38:11] total 409176
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-09 21:38:11] -rwx------ 1 boincer umatlas     36292 Oct  9 06:43 runpilot2-wrapper.sh
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 06:46 queuedata.json
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas       100 Oct  9 19:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 21:38:11] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 19:32 run_atlas
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas       105 Oct  9 19:32 job.xml
[2025-10-09 21:38:11] -rw-r--r-- 2 boincer umatlas 218715781 Oct  9 19:32 EVNT.46676267._000557.pool.root.1
[2025-10-09 21:38:11] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 19:32 start_atlas.sh
[2025-10-09 21:38:11] drwxrwx--x 2 boincer umatlas      4096 Oct  9 19:32 shared
[2025-10-09 21:38:11] -rw-r--r-- 2 boincer umatlas    569683 Oct  9 19:32 input.tar.gz
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas         0 Oct  9 19:32 boinc_lockfile
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas      2550 Oct  9 19:32 pandaJob.out
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas    975454 Oct  9 19:32 agis_schedconf.cvmfs.json
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas   1560580 Oct  9 19:32 agis_ddmendpoints.agis.ALL.json
[2025-10-09 21:38:11] drwx------ 5 boincer umatlas      4096 Oct  9 19:32 pilot3
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas      5910 Oct  9 21:31 init_data.xml
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas 193550626 Oct  9 21:36 HITS.46676269._013607.pool.root.1
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas       529 Oct  9 21:36 boinc_task_state.xml
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas      1051 Oct  9 21:37 memory_monitor_summary.json
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas    359238 Oct  9 21:37 log.46676269._013607.job.log.tgz.1
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas      7850 Oct  9 21:37 heartbeat.json
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas        95 Oct  9 21:37 pilot_heartbeat.json
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 21:38 boinc_mmap_file
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas        27 Oct  9 21:38 wrapper_checkpoint.txt
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas      4818 Oct  9 21:38 pilotlog.txt
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas   1053250 Oct  9 21:38 log.46676269._013607.job.log.1
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas       357 Oct  9 21:38 output.list
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas       620 Oct  9 21:38 runtime_log
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas   1433600 Oct  9 21:38 result.tar.gz
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas      8703 Oct  9 21:38 runtime_log.err
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas       659 Oct  9 21:38 nlsNDmxI3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpWNMDmzf5RCn.diag
[2025-10-09 21:38:11] -rw-r--r-- 1 boincer umatlas     21090 Oct  9 21:38 stderr.txt
[2025-10-09 21:38:11] HITS file was successfully produced:
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas 193550626 Oct  9 21:36 shared/HITS.pool.root.1
[2025-10-09 21:38:11]  *** Contents of shared directory: ***
[2025-10-09 21:38:11] total 404588
[2025-10-09 21:38:11] -rw-r--r-- 2 boincer umatlas 218715781 Oct  9 19:32 ATLAS.root_0
[2025-10-09 21:38:11] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 19:32 start_atlas.sh
[2025-10-09 21:38:11] -rw-r--r-- 2 boincer umatlas    569683 Oct  9 19:32 input.tar.gz
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas 193550626 Oct  9 21:36 HITS.pool.root.1
[2025-10-09 21:38:11] -rw------- 1 boincer umatlas   1433600 Oct  9 21:38 result.tar.gz
21:38:12 (19444): run_atlas exited; CPU time 55210.310775
21:38:12 (19444): called boinc_finish(0)

</stderr_txt>
]]>

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