Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:37 (826742): wrapper (7.7.26015): starting
10:30:37 (826742): wrapper: running run_atlas (--nthreads 3)
[2025-10-10 10:30:37] Arguments: --nthreads 3
[2025-10-10 10:30:37] Threads: 3
[2025-10-10 10:30:37] Checking for CVMFS
[2025-10-10 10:30:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:30:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:30:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:30:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:30:37] 2.9.2.0 477430 1191 75688 151539 3 57 32039526 36864001 0 130560 0 919691 99.991 38541 892 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 10:30:37] CVMFS is ok
[2025-10-10 10:30:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:30:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:30:37] Further information can be found at the LHC@home message board.
[2025-10-10 10:30:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:30:37] Checking for apptainer binary...
[2025-10-10 10:30:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:30:37] Running /usr/bin/apptainer --version
[2025-10-10 10:30:37] apptainer version 1.4.1-1.1
[2025-10-10 10:30:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:30:37] atlasA217a
[2025-10-10 10:30:37] apptainer works
[2025-10-10 10:30:37] Set ATHENA_PROC_NUMBER=3
[2025-10-10 10:30:37] Set ATHENA_CORE_NUMBER=3
[2025-10-10 10:30:37] Starting ATLAS job with PandaID=6837349958
[2025-10-10 10:30:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:56:57]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:56:57]  lfn=log.46676269._021351.job.log.tgz.1
[2025-10-10 11:56:57]  mtime=0
[2025-10-10 11:56:57]  protocol_id=None
[2025-10-10 11:56:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 11:56:57]  replicas=None
[2025-10-10 11:56:57]  scope=mc23_13p6TeV
[2025-10-10 11:56:57]  status=None
[2025-10-10 11:56:57]  status_code=0
[2025-10-10 11:56:57]  storage_token=
[2025-10-10 11:56:57]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6837349958/log.46676269._021351.job.log.tgz.1
[2025-10-10 11:56:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/24/log.46676269._021351.job.log.tgz.1
[2025-10-10 11:56:57]  workdir=None
[2025-10-10 11:56:57] ]
[2025-10-10 11:56:57] 2025-10-10 09:56:40,330 | INFO     | transferring file log.46676269._021351.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6837349958/log.46676269._021351.job.log.tgz.1 to /local/data/boinc/
[2025-10-10 11:56:57] 2025-10-10 09:56:40,330 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6837349958/log.46676269._021351.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0213
[2025-10-10 11:56:57] 2025-10-10 09:56:40,343 | INFO     | adding to output.list: log.46676269._021351.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/24/log.46676269._021351.job.log.tg
[2025-10-10 11:56:57] 2025-10-10 09:56:40,343 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 11:56:57] 2025-10-10 09:56:40,343 | INFO     | summary of transferred files:
[2025-10-10 11:56:57] 2025-10-10 09:56:40,343 | INFO     |  -- lfn=log.46676269._021351.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 11:56:57] 2025-10-10 09:56:40,343 | INFO     | stage-out finished correctly
[2025-10-10 11:56:57] 2025-10-10 09:56:41,143 | INFO     | time since job start (5158s) is within the limit (172800.0s)
[2025-10-10 11:56:57] 2025-10-10 09:56:41,330 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 11:56:57] 2025-10-10 09:56:41,362 | INFO     | job 6837349958 has state=finished
[2025-10-10 11:56:57] 2025-10-10 09:56:41,362 | INFO     | preparing for final server update for job 6837349958 in state='finished'
[2025-10-10 11:56:57] 2025-10-10 09:56:41,362 | INFO     | this job has now completed (state=finished)
[2025-10-10 11:56:57] 2025-10-10 09:56:41,362 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 11:56:57] 2025-10-10 09:56:41,362 | INFO     | log transfer has been attempted: DONE
[2025-10-10 11:56:57] 2025-10-10 09:56:41,362 | INFO     | job 6837349958 has finished - writing final server update
[2025-10-10 11:56:57] 2025-10-10 09:56:41,362 | INFO     | total number of processed events: 400 (read)
[2025-10-10 11:56:57] 2025-10-10 09:56:41,363 | INFO     | executing command: lscpu
[2025-10-10 11:56:57] 2025-10-10 09:56:41,376 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 11:56:57] 2025-10-10 09:56:41,711 | INFO     | monitor loop #397: job 0:6837349958 is in state 'finished'
[2025-10-10 11:56:57] 2025-10-10 09:56:41,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 11:56:57] 2025-10-10 09:56:43,149 | INFO     | time since job start (5160s) is within the limit (172800.0s)
[2025-10-10 11:56:57] 2025-10-10 09:56:44,214 | INFO     | monitor loop #398: job 0:6837349958 is in state 'finished'
[2025-10-10 11:56:57] 2025-10-10 09:56:44,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 11:56:57] 2025-10-10 09:56:45,150 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 11:56:57] 2025-10-10 09:56:45,151 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3753.470583333332
[2025-10-10 11:56:57] 2025-10-10 09:56:45,152 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837349958/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 11:56:57] 2025-10-10 09:56:45,152 | INFO     | extracted standard info from prmon json
[2025-10-10 11:56:57] 2025-10-10 09:56:45,152 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 11:56:57] 2025-10-10 09:56:45,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 11:56:57] 2025-10-10 09:56:45,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 11:56:57] 2025-10-10 09:56:45,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | fitting pss+swap vs Time
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | sum of square deviations: 147126479.5
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | sum of deviations: -13420002440.0
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | mean x: 1760087715.5
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | mean y: 2472341.487179487
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | -- intersect: 160547205804.1269
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | intersect: 160547205804.1269
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | chi2: 0.056181239904090755
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | -- intersect: 160547205804.1269
[2025-10-10 11:56:57] 2025-10-10 09:56:45,153 | INFO     | current memory leak: -91.21 B/s (using 78 data points, chi2=0.06)
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | could have reported an average CPU frequency of 3831 MHz (6 samples)
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | ..............................
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | . Timing measurements:
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | . get job = 0 s
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | . initial setup = 1 s
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | . payload setup = 2 s
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | . stage-in = 0 s
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | . payload execution = 5137 s
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | . stage-out = 0 s
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | . log creation = 0 s
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | ..............................
[2025-10-10 11:56:57] 2025-10-10 09:56:45,154 | INFO     | time since job start (5162s) is within the limit (172800.0s)
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | 
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | job summary report
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | --------------------------------------------------
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | PanDA job id: 6837349958
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | task id: 46676269
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | errors: (none)
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | pilot state: finished 
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | transexitcode: 0
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | exeerrorcode: 0
[2025-10-10 11:56:57] 2025-10-10 09:56:45,185 | INFO     | exeerrordiag: 
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | exitcode: 0
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | exitmsg: OK
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | cpuconsumptiontime: 14753 s
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | nevents: 400
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | neventsw: 0
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | pid: 836891
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | pgrp: 836891
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | corecount: 3
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | event service: False
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | sizes: {0: 2348027, 1: 2348886, 3: 2349148, 11: 2349176, 5143: 2375799, 5144: 2384986, 5145: 2384986, 5149: 2385180}
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | --------------------------------------------------
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | 
[2025-10-10 11:56:57] 2025-10-10 09:56:45,186 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,200 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 11:56:57] 2025-10-10 09:56:45,200 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,200 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 11:56:57] 2025-10-10 09:56:45,200 | INFO     | job 6837349958 has completed (purged errors)
[2025-10-10 11:56:57] 2025-10-10 09:56:45,200 | INFO     | overall cleanup function is called
[2025-10-10 11:56:57] 2025-10-10 09:56:46,206 | INFO     | --- collectZombieJob: --- 10, [836891]
[2025-10-10 11:56:57] 2025-10-10 09:56:46,207 | INFO     | zombie collector waiting for pid 836891
[2025-10-10 11:56:57] 2025-10-10 09:56:46,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 11:56:57] 2025-10-10 09:56:46,207 | INFO     | collected zombie processes
[2025-10-10 11:56:57] 2025-10-10 09:56:46,207 | INFO     | will attempt to kill all subprocesses of pid=836891
[2025-10-10 11:56:57] 2025-10-10 09:56:46,248 | INFO     | process IDs to be killed: [836891] (in reverse order)
[2025-10-10 11:56:57] 2025-10-10 09:56:46,271 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 11:56:57] 2025-10-10 09:56:46,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 11:56:57] 2025-10-10 09:56:46,273 | INFO     | did not find any defunct processes belonging to 836891
[2025-10-10 11:56:57] 2025-10-10 09:56:46,274 | INFO     | did not find any defunct processes belonging to 836891
[2025-10-10 11:56:57] 2025-10-10 09:56:46,274 | INFO     | ready for new job
[2025-10-10 11:56:57] 2025-10-10 09:56:46,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 11:56:57] 2025-10-10 09:56:46,274 | INFO     | ***************************************
[2025-10-10 11:56:57] 2025-10-10 09:56:46,274 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 11:56:57] 2025-10-10 09:56:46,274 | INFO     | ***************************************
[2025-10-10 11:56:57] 2025-10-10 09:56:46,274 | INFO     | 
[2025-10-10 11:56:57] 2025-10-10 09:56:46,275 | INFO     | architecture information:
[2025-10-10 11:56:57] 2025-10-10 09:56:46,275 | INFO     | executing command: cat /etc/os-release
[2025-10-10 11:56:57] 2025-10-10 09:56:46,284 | INFO     | cat /etc/os-release:
[2025-10-10 11:56:57] NAME="CentOS Linux"
[2025-10-10 11:56:57] VERSION="7 (Core)"
[2025-10-10 11:56:57] ID="centos"
[2025-10-10 11:56:57] ID_LIKE="rhel fedora"
[2025-10-10 11:56:57] VERSION_ID="7"
[2025-10-10 11:56:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 11:56:57] ANSI_COLOR="0;31"
[2025-10-10 11:56:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 11:56:57] HOME_URL="https://www.centos.org/"
[2025-10-10 11:56:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 11:56:57] 
[2025-10-10 11:56:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 11:56:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 11:56:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 11:56:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 11:56:57] 
[2025-10-10 11:56:57] 2025-10-10 09:56:46,284 | INFO     | ***************************************
[2025-10-10 11:56:57] 2025-10-10 09:56:46,787 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 11:56:57] 2025-10-10 09:56:46,800 | INFO     | sufficient remaining disk space (327709360128 B)
[2025-10-10 11:56:57] 2025-10-10 09:56:46,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 11:56:57] 2025-10-10 09:56:46,801 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 11:56:57] 2025-10-10 09:56:46,801 | INFO     | update_server=False
[2025-10-10 11:56:57] 2025-10-10 09:56:46,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 11:56:57] 2025-10-10 09:56:46,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 11:56:57] 2025-10-10 09:56:46,801 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-10 11:56:57] 2025-10-10 09:56:46,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:56:57] 2025-10-10 09:56:46,801 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:56:57] 2025-10-10 09:56:46,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:56:57] 2025-10-10 09:56:46,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:56:57] 2025-10-10 09:56:47,029 | INFO     | all data control threads have been joined
[2025-10-10 11:56:57] 2025-10-10 09:56:47,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:56:57] 2025-10-10 09:56:47,434 | INFO     | all payload control threads have been joined
[2025-10-10 11:56:57] 2025-10-10 09:56:47,634 | INFO     | all job control threads have been joined
[2025-10-10 11:56:57] 2025-10-10 09:56:47,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:56:57] 2025-10-10 09:56:47,723 | INFO     | aborting loop
[2025-10-10 11:56:57] 2025-10-10 09:56:47,806 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:47,806 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,035 | INFO     | [data] control thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,090 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,417 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,440 | INFO     | [payload] control thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,622 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,640 | INFO     | [job] control thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,729 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:48,807 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:49,008 | INFO     | [job] validate thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:49,050 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:49,054 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:49,127 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:49,242 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:56:57] 2025-10-10 09:56:51,375 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:56:57] 2025-10-10 09:56:52,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114771502912)>', '<ExcThread(monitor, started 140114416088832)>']
[2025-10-10 11:56:57] 2025-10-10 09:56:52,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:56:57] 2025-10-10 09:56:52,833 | INFO     | [monitor] control thread has ended
[2025-10-10 11:56:57] 2025-10-10 09:56:57,385 | INFO     | all workflow threads have been joined
[2025-10-10 11:56:57] 2025-10-10 09:56:57,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:56:57] 2025-10-10 09:56:57,386 | INFO     | traces error code: 0
[2025-10-10 11:56:57] 2025-10-10 09:56:57,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:56:57] 2025-10-10 09:56:57,437 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:56:57] 2025-10-10 09:56:57,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:56:57] 2025-10-10 09:56:57,441 [wrapper] pilotpid: 830461
[2025-10-10 11:56:57] 2025-10-10 09:56:57,443 [wrapper] Pilot exit status: 0
[2025-10-10 11:56:57] 2025-10-10 09:56:57,451 [wrapper] pandaids: 6837349958
[2025-10-10 11:56:57] 2025-10-10 09:56:57,466 [wrapper] cleanup supervisor_pilot  849159 830462
[2025-10-10 11:56:57] 2025-10-10 09:56:57,469 [wrapper] Test setup, not cleaning
[2025-10-10 11:56:57] 2025-10-10 09:56:57,471 [wrapper] apfmon messages muted
[2025-10-10 11:56:57] 2025-10-10 09:56:57,473 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:56:57] 2025-10-10 09:56:57,475 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:56:57]  *** Error codes and diagnostics ***
[2025-10-10 11:56:57]     "exeErrorCode": 0,
[2025-10-10 11:56:57]     "exeErrorDiag": "",
[2025-10-10 11:56:57]     "pilotErrorCode": 0,
[2025-10-10 11:56:57]     "pilotErrorDiag": "",
[2025-10-10 11:56:57]  *** Listing of results directory ***
[2025-10-10 11:56:57] total 413608
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc      5112 Oct  9 17:29 queuedata.json
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc    557409 Oct  9 17:29 pilot3.tar.gz
[2025-10-10 11:56:57] -rwx------ 1 boinc boinc     36292 Oct  9 17:30 runpilot2-wrapper.sh
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc       100 Oct 10 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:56:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 10:30 run_atlas
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc       105 Oct 10 10:30 job.xml
[2025-10-10 11:56:57] -rw-r--r-- 2 boinc boinc 220306273 Oct 10 10:30 EVNT.46676267._000890.pool.root.1
[2025-10-10 11:56:57] -rw-r--r-- 2 boinc boinc    569679 Oct 10 10:30 input.tar.gz
[2025-10-10 11:56:57] -rw-r--r-- 2 boinc boinc     15120 Oct 10 10:30 start_atlas.sh
[2025-10-10 11:56:57] drwxrwx--x 2 boinc boinc      4096 Oct 10 10:30 shared
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc         0 Oct 10 10:30 boinc_setup_complete
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc      6444 Oct 10 10:30 init_data.xml
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc         0 Oct 10 10:30 boinc_lockfile
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc      2549 Oct 10 10:30 pandaJob.out
[2025-10-10 11:56:57] -rw------- 1 boinc boinc    975462 Oct 10 10:30 agis_schedconf.cvmfs.json
[2025-10-10 11:56:57] -rw------- 1 boinc boinc   1560580 Oct 10 10:30 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:56:57] drwx------ 5 boinc boinc      4096 Oct 10 10:30 pilot3
[2025-10-10 11:56:57] -rw------- 1 boinc boinc        95 Oct 10 11:56 pilot_heartbeat.json
[2025-10-10 11:56:57] -rw------- 1 boinc boinc 197272749 Oct 10 11:56 HITS.46676269._021351.pool.root.1
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc       529 Oct 10 11:56 boinc_task_state.xml
[2025-10-10 11:56:57] -rw------- 1 boinc boinc      1020 Oct 10 11:56 memory_monitor_summary.json
[2025-10-10 11:56:57] -rw------- 1 boinc boinc    267311 Oct 10 11:56 log.46676269._021351.job.log.tgz.1
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc      8192 Oct 10 11:56 boinc_mmap_file
[2025-10-10 11:56:57] -rw------- 1 boinc boinc      7773 Oct 10 11:56 heartbeat.json
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc        27 Oct 10 11:56 wrapper_checkpoint.txt
[2025-10-10 11:56:57] -rw------- 1 boinc boinc      4556 Oct 10 11:56 pilotlog.txt
[2025-10-10 11:56:57] -rw------- 1 boinc boinc    754819 Oct 10 11:56 log.46676269._021351.job.log.1
[2025-10-10 11:56:57] -rw------- 1 boinc boinc       357 Oct 10 11:56 output.list
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc       620 Oct 10 11:56 runtime_log
[2025-10-10 11:56:57] -rw------- 1 boinc boinc   1044480 Oct 10 11:56 result.tar.gz
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc      8797 Oct 10 11:56 runtime_log.err
[2025-10-10 11:56:57] -rw------- 1 boinc boinc       662 Oct 10 11:56 PO2KDmvl7Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoDOMDmOuMsPm.diag
[2025-10-10 11:56:57] -rw-r--r-- 1 boinc boinc     21559 Oct 10 11:56 stderr.txt
[2025-10-10 11:56:57] HITS file was successfully produced:
[2025-10-10 11:56:57] -rw------- 1 boinc boinc 197272749 Oct 10 11:56 shared/HITS.pool.root.1
[2025-10-10 11:56:57]  *** Contents of shared directory: ***
[2025-10-10 11:56:57] total 409400
[2025-10-10 11:56:57] -rw-r--r-- 2 boinc boinc 220306273 Oct 10 10:30 ATLAS.root_0
[2025-10-10 11:56:57] -rw-r--r-- 2 boinc boinc    569679 Oct 10 10:30 input.tar.gz
[2025-10-10 11:56:57] -rw-r--r-- 2 boinc boinc     15120 Oct 10 10:30 start_atlas.sh
[2025-10-10 11:56:57] -rw------- 1 boinc boinc 197272749 Oct 10 11:56 HITS.pool.root.1
[2025-10-10 11:56:57] -rw------- 1 boinc boinc   1044480 Oct 10 11:56 result.tar.gz
11:56:59 (826742): run_atlas exited; CPU time 14771.493966
11:56:59 (826742): called boinc_finish(0)

</stderr_txt>
]]>

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