Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 03:23:04 (15804): vboxwrapper version 26210
2025-10-10 03:23:04 (15804): BOINC client version: 7.22.2
2025-10-10 03:23:05 (15804): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-10 03:23:05 (15804): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 03:23:06 (15804): Create VM. (boinc_3adaf649c8169c06, slot#0)
2025-10-10 03:23:06 (15804): Setting Memory Size for VM. (4700MB)
2025-10-10 03:23:07 (15804): Setting CPU Count for VM. (7)
2025-10-10 03:23:07 (15804): Setting Chipset Options for VM.
2025-10-10 03:23:07 (15804): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 03:23:08 (15804): Setting Boot Options for VM.
2025-10-10 03:23:08 (15804): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 03:23:09 (15804): Enabling VM Network Access.
2025-10-10 03:23:09 (15804): Disabling USB Support for VM.
2025-10-10 03:23:09 (15804): Disabling COM Port Support for VM.
2025-10-10 03:23:10 (15804): Disabling LPT Port Support for VM.
2025-10-10 03:23:10 (15804): Disabling Audio Support for VM.
2025-10-10 03:23:10 (15804): Disabling Clipboard Support for VM.
2025-10-10 03:23:11 (15804): Disabling Drag and Drop Support for VM.
2025-10-10 03:23:11 (15804): Adding storage controller(s) to VM.
2025-10-10 03:23:11 (15804): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 03:23:14 (15804): Adding VirtualBox Guest Additions to VM.
2025-10-10 03:23:15 (15804): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 03:23:15 (15804): forwarding host port 49154 to guest port 80
2025-10-10 03:23:15 (15804): Enabling remote desktop for VM.
2025-10-10 03:23:16 (15804): Required extension pack not installed, remote desktop not enabled.
2025-10-10 03:23:16 (15804): Enabling shared directory for VM.
2025-10-10 03:23:16 (15804): Starting VM using VBoxManage interface. (boinc_3adaf649c8169c06, slot#0)
2025-10-10 03:23:28 (15804): Successfully started VM. (PID = '18636')
2025-10-10 03:23:28 (15804): Reporting VM Process ID to BOINC.
2025-10-10 03:23:28 (15804): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-10 03:23:28 (15804): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 03:23:28 (15804): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 03:23:28 (15804): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 03:23:28 (15804): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 03:23:28 (15804): Detected: Web Application Enabled (http://localhost:49154)
2025-10-10 03:23:28 (15804): Preference change detected
2025-10-10 03:23:28 (15804): Setting CPU throttle for VM. (75%)
2025-10-10 03:23:28 (15804): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 03:23:30 (15804): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 03:23:30 (15804): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 03:23:36 (15804): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 03:23:36 (15804): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 03:23:36 (15804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 03:23:51 (15804): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 03:23:51 (15804): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 03:24:24 (15804): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 03:24:24 (15804): Guest Log: 00:00:00.000402 main     Log opened 2025-10-10T03:24:22.513697000Z
2025-10-10 03:24:24 (15804): Guest Log: 00:00:00.000606 main     OS Product: Linux
2025-10-10 03:24:24 (15804): Guest Log: 00:00:00.000724 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 03:24:24 (15804): Guest Log: 00:00:00.000792 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 03:24:24 (15804): Guest Log: 00:00:00.000858 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 03:24:24 (15804): Guest Log: 00:00:00.000860 main     Process ID: 1337
2025-10-10 03:24:24 (15804): Guest Log: 00:00:00.000861 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 03:24:24 (15804): Guest Log: 00:00:00.002566 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 03:24:24 (15804): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 03:24:24 (15804): Guest Log: [INFO] Mounting shared directory
2025-10-10 03:24:24 (15804): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 03:24:31 (15804): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 03:24:31 (15804): Guest Log: [INFO] Detected branch: prod
2025-10-10 03:24:32 (15804): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 03:24:32 (15804): Guest Log: Copying input files
2025-10-10 03:24:34 (15804): Guest Log: 00:00:10.014406 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 173 859 000ns (GuestNow=1 760 081 073 699 131 000 ns GuestLast=1 760 066 662 525 272 000 ns fSetTimeLastLoop=true )
2025-10-10 03:24:37 (15804): Guest Log: Copied input files into RunAtlas.
2025-10-10 03:24:37 (15804): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 03:24:37 (15804): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 03:24:37 (15804): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 03:24:38 (15804): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 03:25:34 (15804): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 03:25:35 (15804): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 03:25:35 (15804): Guest Log: 2.6.3.0 1621 1 30080 151538 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 03:25:41 (15804): Guest Log: copied the webapp to /var/www
2025-10-10 03:25:41 (15804): Guest Log: ATHENA_PROC_NUMBER=7
2025-10-10 03:25:41 (15804): Guest Log: ATHENA_CORE_NUMBER=7
2025-10-10 03:25:41 (15804): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 03:25:41 (15804): Guest Log:  *** Starting ATLAS job. (PandaID=6837358158 taskID=46676269) ***
2025-10-10 03:38:02 (15804): Guest Log:  *** Job finished ***
2025-10-10 03:38:02 (15804): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:37:25,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:37:25,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:37:54,313 | INFO     | [monitor] cgroup control has ended
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:37:55,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643556837184)>', '<ExcThread(monitor, started 139643110536960)>']
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:37:55,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:37:55,580 | INFO     | [monitor] control thread has ended
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,011 | INFO     | all workflow threads have been joined
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,012 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,013 | INFO     | traces error code: 0
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,461 [wrapper] ==== pilot stdout END ====
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,489 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,514 [wrapper] pilotpid: 6063
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,538 [wrapper] Pilot exit status: 0
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,653 [wrapper] pandaids: 6837358158
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,772 [wrapper] cleanup supervisor_pilot  6069 6064
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,795 [wrapper] Test setup, not cleaning
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,814 [wrapper] apfmon messages muted
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,834 [wrapper] ==== wrapper stdout END ====
2025-10-10 03:38:02 (15804): Guest Log: 2025-10-10 07:38:00,856 [wrapper] ==== wrapper stderr END ====
2025-10-10 03:38:02 (15804): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 03:38:02 (15804): Guest Log:     "exeErrorCode": 65,
2025-10-10 03:38:02 (15804): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-10 03:38:02 (15804): Guest Log:     "pilotErrorCode": 1305,
2025-10-10 03:38:02 (15804): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-10 03:38:02 (15804): Guest Log:  *** Listing of results directory ***
2025-10-10 03:38:02 (15804): Guest Log: total 4256
2025-10-10 03:38:02 (15804): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct  9 18:06 pilot3.tar.gz
2025-10-10 03:38:02 (15804): Guest Log: -rwx------. 1 atlas atlas   36292 Oct  9 18:19 runpilot2-wrapper.sh
2025-10-10 03:38:02 (15804): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct  9 18:19 queuedata.json
2025-10-10 03:38:02 (15804): Guest Log: -rwxr-xr-x. 1 atlas atlas    6103 Oct 10 07:24 init_data.xml
2025-10-10 03:38:02 (15804): Guest Log: -rwxr-xr-x. 1 atlas atlas  569677 Oct 10 07:24 input.tar.gz
2025-10-10 03:38:02 (15804): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 10 07:24 start_atlas.sh
2025-10-10 03:38:02 (15804): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 10 07:24 EVNT.46676267._000989.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 03:38:02 (15804): Guest Log: -rw-r--r--. 1 atlas atlas    2548 Oct 10 07:25 pandaJob.out
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas  975454 Oct 10 07:26 agis_schedconf.cvmfs.json
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas 1560580 Oct 10 07:26 agis_ddmendpoints.agis.ALL.json
2025-10-10 03:38:02 (15804): Guest Log: drwx------. 5 atlas atlas    4096 Oct 10 07:26 pilot3
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas   53543 Oct 10 07:34 log.46676269._024120.job.log.tgz.1
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas    8183 Oct 10 07:36 heartbeat.json
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas      95 Oct 10 07:37 pilot_heartbeat.json
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas    4805 Oct 10 07:38 pilotlog.txt
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas  211792 Oct 10 07:38 log.46676269._024120.job.log.1
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas     188 Oct 10 07:38 output.list
2025-10-10 03:38:02 (15804): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 10 07:38 runtime_log
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas  286720 Oct 10 07:38 result.tar.gz
2025-10-10 03:38:02 (15804): Guest Log: -rw-------. 1 atlas atlas     647 Oct 10 07:38 wJmKDmkPAR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPVOMDmCHn3An.diag
2025-10-10 03:38:02 (15804): Guest Log: -rw-r--r--. 1 atlas atlas    8492 Oct 10 07:38 runtime_log.err
2025-10-10 03:38:02 (15804): Guest Log: Looking for outputfile HITS.46676269._024120.pool.root.1
2025-10-10 03:38:02 (15804): Guest Log: No HITS file was produced
2025-10-10 03:38:02 (15804): Guest Log: Successfully finished the ATLAS job!
2025-10-10 03:38:02 (15804): Guest Log: Copying the results back to the shared directory!
2025-10-10 03:38:02 (15804): Guest Log:  *** Contents of shared directory: ***
2025-10-10 03:38:02 (15804): Guest Log: total 217072
2025-10-10 03:38:02 (15804): Guest Log: -rwxrwxrwx. 1 root root 221395189 Oct 10 07:23 ATLAS.root_0
2025-10-10 03:38:02 (15804): Guest Log: -rwxrwxrwx. 1 root root      6103 Oct 10 07:23 init_data.xml
2025-10-10 03:38:02 (15804): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct  9 23:36 input.tar.gz
2025-10-10 03:38:02 (15804): Guest Log: -rwxrwxrwx. 1 root root    286720 Oct 10 07:38 result.tar.gz
2025-10-10 03:38:02 (15804): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 23:36 start_atlas.sh
2025-10-10 03:38:02 (15804): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 03:38:02 (15804): VM Completion File Detected.
2025-10-10 03:38:02 (15804): Powering off VM.
2025-10-10 03:38:04 (15804): Successfully stopped VM.
2025-10-10 03:38:04 (15804): Deregistering VM. (boinc_3adaf649c8169c06, slot#0)
2025-10-10 03:38:04 (15804): Removing network bandwidth throttle group from VM.
2025-10-10 03:38:04 (15804): Removing VM from VirtualBox.
2025-10-10 03:38:10 (15804): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN