Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:27:28 (28594): wrapper (7.7.26015): starting
19:27:28 (28594): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 19:27:28] Arguments: --nthreads 12
[2025-10-09 19:27:28] Threads: 12
[2025-10-09 19:27:28] Checking for CVMFS
[2025-10-09 19:27:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 19:27:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 19:27:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 19:27:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 19:27:29] 2.11.2.0 2925 219221 97796 151527 0 56 17830205 20275200 1 130560 1 104420855 99.984 12769916 12088 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 19:27:29] CVMFS is ok
[2025-10-09 19:27:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 19:27:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 19:27:29] Further information can be found at the LHC@home message board.
[2025-10-09 19:27:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 19:27:29] Checking for apptainer binary...
[2025-10-09 19:27:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 19:27:29] Running /usr/bin/apptainer --version
[2025-10-09 19:27:29] apptainer version 1.3.2-1.el7
[2025-10-09 19:27:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 19:27:30] c-205-10.aglt2.org
[2025-10-09 19:27:30] apptainer works
[2025-10-09 19:27:30] Set ATHENA_PROC_NUMBER=12
[2025-10-09 19:27:30] Set ATHENA_CORE_NUMBER=12
[2025-10-09 19:27:30] Starting ATLAS job with PandaID=6837338852
[2025-10-09 19:27:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 20:39:58]  *** The last 200 lines of the pilot log: ***
[2025-10-09 20:39:58]  storage_token=
[2025-10-09 20:39:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837338852/log.46676269._017757.job.log.tgz.1
[2025-10-09 20:39:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/f4/log.46676269._017757.job.log.tgz.1
[2025-10-09 20:39:58]  workdir=None
[2025-10-09 20:39:58] ]
[2025-10-09 20:39:58] 2025-10-10 00:39:16,903 | INFO     | transferring file log.46676269._017757.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837338852/log.46676269._017757.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 20:39:58] 2025-10-10 00:39:16,903 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837338852/log.46676269._017757.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._017757.job
[2025-10-09 20:39:58] 2025-10-10 00:39:16,923 | INFO     | adding to output.list: log.46676269._017757.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/f4/log.46676269._017757.job.log.tg
[2025-10-09 20:39:58] 2025-10-10 00:39:16,924 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 20:39:58] 2025-10-10 00:39:16,924 | INFO     | summary of transferred files:
[2025-10-09 20:39:58] 2025-10-10 00:39:16,924 | INFO     |  -- lfn=log.46676269._017757.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 20:39:58] 2025-10-10 00:39:16,925 | INFO     | stage-out finished correctly
[2025-10-09 20:39:58] 2025-10-10 00:39:17,160 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 20:39:58] 2025-10-10 00:39:17,331 | WARNING  | process 6461 can no longer be monitored (due to stat problems) - aborting
[2025-10-09 20:39:58] 2025-10-10 00:39:17,331 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837338852/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 20:39:58] 2025-10-10 00:39:17,419 | INFO     | number of running child processes to parent process 6461: 1
[2025-10-09 20:39:58] 2025-10-10 00:39:17,419 | INFO     | maximum number of monitored processes: 6
[2025-10-09 20:39:58] 2025-10-10 00:39:17,477 | INFO     | time since job start (4291s) is within the limit (172800.0s)
[2025-10-09 20:39:58] 2025-10-10 00:39:19,483 | INFO     | time since job start (4293s) is within the limit (172800.0s)
[2025-10-09 20:39:58] 2025-10-10 00:39:19,922 | INFO     | monitor loop #321: job 0:6837338852 is in state 'finished'
[2025-10-09 20:39:58] 2025-10-10 00:39:19,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 20:39:58] 2025-10-10 00:39:20,176 | INFO     | job 6837338852 has state=finished
[2025-10-09 20:39:58] 2025-10-10 00:39:20,176 | INFO     | preparing for final server update for job 6837338852 in state='finished'
[2025-10-09 20:39:58] 2025-10-10 00:39:20,177 | INFO     | this job has now completed (state=finished)
[2025-10-09 20:39:58] 2025-10-10 00:39:20,177 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 20:39:58] 2025-10-10 00:39:20,177 | INFO     | log transfer has been attempted: DONE
[2025-10-09 20:39:58] 2025-10-10 00:39:20,177 | INFO     | job 6837338852 has finished - writing final server update
[2025-10-09 20:39:58] 2025-10-10 00:39:20,178 | INFO     | total number of processed events: 400 (read)
[2025-10-09 20:39:58] 2025-10-10 00:39:20,178 | INFO     | executing command: lscpu
[2025-10-09 20:39:58] 2025-10-10 00:39:20,205 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 20:39:58] 2025-10-10 00:39:21,488 | INFO     | time since job start (4295s) is within the limit (172800.0s)
[2025-10-09 20:39:58] 2025-10-10 00:39:22,425 | INFO     | monitor loop #322: job 0:6837338852 is in state 'finished'
[2025-10-09 20:39:58] 2025-10-10 00:39:22,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 20:39:58] 2025-10-10 00:39:23,493 | INFO     | time since job start (4297s) is within the limit (172800.0s)
[2025-10-09 20:39:58] 2025-10-10 00:39:24,928 | INFO     | monitor loop #323: job 0:6837338852 is in state 'finished'
[2025-10-09 20:39:58] 2025-10-10 00:39:24,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 20:39:58] 2025-10-10 00:39:24,936 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 20:39:58] 2025-10-10 00:39:24,940 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2025-10-09 20:39:58] 2025-10-10 00:39:24,942 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837338852/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 20:39:58] 2025-10-10 00:39:24,943 | INFO     | extracted standard info from prmon json
[2025-10-09 20:39:58] 2025-10-10 00:39:24,943 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 20:39:58] 2025-10-10 00:39:24,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 20:39:58] 2025-10-10 00:39:24,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 20:39:58] 2025-10-10 00:39:24,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 20:39:58] 2025-10-10 00:39:24,946 | INFO     | fitting pss+swap vs Time
[2025-10-09 20:39:58] 2025-10-10 00:39:24,947 | INFO     | sum of square deviations: 77515872.0
[2025-10-09 20:39:58] 2025-10-10 00:39:24,947 | INFO     | sum of deviations: -5918071526.0
[2025-10-09 20:39:58] 2025-10-10 00:39:24,947 | INFO     | mean x: 1760054691.0
[2025-10-09 20:39:58] 2025-10-10 00:39:24,947 | INFO     | mean y: 2880535.603174603
[2025-10-09 20:39:58] 2025-10-10 00:39:24,947 | INFO     | -- intersect: 134377032335.24788
[2025-10-09 20:39:58] 2025-10-10 00:39:24,947 | INFO     | intersect: 134377032335.24788
[2025-10-09 20:39:58] 2025-10-10 00:39:24,948 | INFO     | chi2: 0.06978583677054954
[2025-10-09 20:39:58] 2025-10-10 00:39:24,948 | INFO     | -- intersect: 134377032335.24788
[2025-10-09 20:39:58] 2025-10-10 00:39:24,948 | INFO     | current memory leak: -76.35 B/s (using 63 data points, chi2=0.07)
[2025-10-09 20:39:58] 2025-10-10 00:39:24,948 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2025-10-09 20:39:58] 2025-10-10 00:39:24,948 | INFO     | ..............................
[2025-10-09 20:39:58] 2025-10-10 00:39:24,948 | INFO     | . Timing measurements:
[2025-10-09 20:39:58] 2025-10-10 00:39:24,949 | INFO     | . get job = 0 s
[2025-10-09 20:39:58] 2025-10-10 00:39:24,949 | INFO     | . initial setup = 2 s
[2025-10-09 20:39:58] 2025-10-10 00:39:24,949 | INFO     | . payload setup = 7 s
[2025-10-09 20:39:58] 2025-10-10 00:39:24,949 | INFO     | . stage-in = 0 s
[2025-10-09 20:39:58] 2025-10-10 00:39:24,949 | INFO     | . payload execution = 4262 s
[2025-10-09 20:39:58] 2025-10-10 00:39:24,949 | INFO     | . stage-out = 0 s
[2025-10-09 20:39:58] 2025-10-10 00:39:24,949 | INFO     | . log creation = 0 s
[2025-10-09 20:39:58] 2025-10-10 00:39:24,949 | INFO     | ..............................
[2025-10-09 20:39:58] 2025-10-10 00:39:25,032 | INFO     | 
[2025-10-09 20:39:58] 2025-10-10 00:39:25,032 | INFO     | job summary report
[2025-10-09 20:39:58] 2025-10-10 00:39:25,032 | INFO     | --------------------------------------------------
[2025-10-09 20:39:58] 2025-10-10 00:39:25,032 | INFO     | PanDA job id: 6837338852
[2025-10-09 20:39:58] 2025-10-10 00:39:25,032 | INFO     | task id: 46676269
[2025-10-09 20:39:58] 2025-10-10 00:39:25,033 | INFO     | errors: (none)
[2025-10-09 20:39:58] 2025-10-10 00:39:25,033 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 20:39:58] 2025-10-10 00:39:25,033 | INFO     | pilot state: finished 
[2025-10-09 20:39:58] 2025-10-10 00:39:25,033 | INFO     | transexitcode: 0
[2025-10-09 20:39:58] 2025-10-10 00:39:25,033 | INFO     | exeerrorcode: 0
[2025-10-09 20:39:58] 2025-10-10 00:39:25,033 | INFO     | exeerrordiag: 
[2025-10-09 20:39:58] 2025-10-10 00:39:25,034 | INFO     | exitcode: 0
[2025-10-09 20:39:58] 2025-10-10 00:39:25,034 | INFO     | exitmsg: OK
[2025-10-09 20:39:58] 2025-10-10 00:39:25,034 | INFO     | cpuconsumptiontime: 46353 s
[2025-10-09 20:39:58] 2025-10-10 00:39:25,034 | INFO     | nevents: 400
[2025-10-09 20:39:58] 2025-10-10 00:39:25,034 | INFO     | neventsw: 0
[2025-10-09 20:39:58] 2025-10-10 00:39:25,034 | INFO     | pid: 6461
[2025-10-09 20:39:58] 2025-10-10 00:39:25,034 | INFO     | pgrp: 6461
[2025-10-09 20:39:58] 2025-10-10 00:39:25,035 | INFO     | corecount: 12
[2025-10-09 20:39:58] 2025-10-10 00:39:25,035 | INFO     | event service: False
[2025-10-09 20:39:58] 2025-10-10 00:39:25,035 | INFO     | sizes: {0: 2348683, 1: 2348882, 6: 2349144, 12: 2349172, 4273: 2375191, 4275: 2384373, 4283: 2384511}
[2025-10-09 20:39:58] 2025-10-10 00:39:25,035 | INFO     | --------------------------------------------------
[2025-10-09 20:39:58] 2025-10-10 00:39:25,035 | INFO     | 
[2025-10-09 20:39:58] 2025-10-10 00:39:25,036 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 20:39:58] 2025-10-10 00:39:25,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,061 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 20:39:58] 2025-10-10 00:39:25,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,064 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 20:39:58] 2025-10-10 00:39:25,064 | INFO     | job 6837338852 has completed (purged errors)
[2025-10-09 20:39:58] 2025-10-10 00:39:25,064 | INFO     | overall cleanup function is called
[2025-10-09 20:39:58] 2025-10-10 00:39:26,069 | INFO     | --- collectZombieJob: --- 10, [6461]
[2025-10-09 20:39:58] 2025-10-10 00:39:26,069 | INFO     | zombie collector waiting for pid 6461
[2025-10-09 20:39:58] 2025-10-10 00:39:26,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 20:39:58] 2025-10-10 00:39:26,070 | INFO     | collected zombie processes
[2025-10-09 20:39:58] 2025-10-10 00:39:26,070 | INFO     | will attempt to kill all subprocesses of pid=6461
[2025-10-09 20:39:58] 2025-10-10 00:39:26,167 | INFO     | process IDs to be killed: [6461] (in reverse order)
[2025-10-09 20:39:58] 2025-10-10 00:39:26,220 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 20:39:58] 2025-10-10 00:39:26,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 20:39:58] 2025-10-10 00:39:26,224 | INFO     | did not find any defunct processes belonging to 6461
[2025-10-09 20:39:58] 2025-10-10 00:39:26,227 | INFO     | did not find any defunct processes belonging to 6461
[2025-10-09 20:39:58] 2025-10-10 00:39:26,227 | INFO     | ready for new job
[2025-10-09 20:39:58] 2025-10-10 00:39:26,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 20:39:58] 2025-10-10 00:39:26,228 | INFO     | ***************************************
[2025-10-09 20:39:58] 2025-10-10 00:39:26,229 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 20:39:58] 2025-10-10 00:39:26,229 | INFO     | ***************************************
[2025-10-09 20:39:58] 2025-10-10 00:39:26,229 | INFO     | 
[2025-10-09 20:39:58] 2025-10-10 00:39:26,229 | INFO     | architecture information:
[2025-10-09 20:39:58] 2025-10-10 00:39:26,230 | INFO     | executing command: cat /etc/os-release
[2025-10-09 20:39:58] 2025-10-10 00:39:26,245 | INFO     | cat /etc/os-release:
[2025-10-09 20:39:58] NAME="CentOS Linux"
[2025-10-09 20:39:58] VERSION="7 (Core)"
[2025-10-09 20:39:58] ID="centos"
[2025-10-09 20:39:58] ID_LIKE="rhel fedora"
[2025-10-09 20:39:58] VERSION_ID="7"
[2025-10-09 20:39:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 20:39:58] ANSI_COLOR="0;31"
[2025-10-09 20:39:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 20:39:58] HOME_URL="https://www.centos.org/"
[2025-10-09 20:39:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 20:39:58] 
[2025-10-09 20:39:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 20:39:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 20:39:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 20:39:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 20:39:58] 
[2025-10-09 20:39:58] 2025-10-10 00:39:26,245 | INFO     | ***************************************
[2025-10-09 20:39:58] 2025-10-10 00:39:26,748 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 20:39:58] 2025-10-10 00:39:26,764 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-10-09 20:39:58] 2025-10-10 00:39:26,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 20:39:58] 2025-10-10 00:39:26,764 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 20:39:58] 2025-10-10 00:39:26,764 | INFO     | update_server=False
[2025-10-09 20:39:58] 2025-10-10 00:39:26,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 20:39:58] 2025-10-10 00:39:26,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 20:39:58] 2025-10-10 00:39:26,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 20:39:58] 2025-10-10 00:39:26,765 | INFO     | aborting loop
[2025-10-09 20:39:58] 2025-10-10 00:39:26,795 | INFO     | all data control threads have been joined
[2025-10-09 20:39:58] 2025-10-10 00:39:26,887 | INFO     | all job control threads have been joined
[2025-10-09 20:39:58] 2025-10-10 00:39:27,435 | INFO     | all payload control threads have been joined
[2025-10-09 20:39:58] 2025-10-10 00:39:27,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 20:39:58] 2025-10-10 00:39:27,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 20:39:58] 2025-10-10 00:39:27,770 | INFO     | [job] retrieve thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:27,771 | INFO     | [job] queue monitor thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:27,771 | INFO     | [job] job monitor thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:27,801 | INFO     | [data] control thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:27,892 | INFO     | [job] control thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:28,083 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:28,427 | INFO     | [data] copytool_in thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:28,441 | INFO     | [payload] control thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:28,795 | INFO     | [job] validate thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:28,967 | INFO     | [payload] validate_post thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:29,158 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:29,161 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:29,338 | INFO     | [payload] failed_post thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:29,534 | INFO     | [data] copytool_out thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:31,754 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:37,041 | INFO     | job.realtimelogging is not enabled
[2025-10-09 20:39:58] 2025-10-10 00:39:38,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 20:39:58] 2025-10-10 00:39:52,553 | INFO     | [monitor] cgroup control has ended
[2025-10-09 20:39:58] 2025-10-10 00:39:53,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569489147712)>', '<ExcThread(monitor, started 140568751490816)>']
[2025-10-09 20:39:58] 2025-10-10 00:39:56,707 | INFO     | PID=32310 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 20:39:58] 2025-10-10 00:39:56,708 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 20:39:58] 2025-10-10 00:39:56,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 20:39:58] 2025-10-10 00:39:56,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 20:39:58] 2025-10-10 00:39:56,708 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 20:39:58] 2025-10-10 00:39:56,708 | INFO     | [monitor] control thread has ended
[2025-10-09 20:39:58] 2025-10-10 00:39:58,247 | INFO     | all workflow threads have been joined
[2025-10-09 20:39:58] 2025-10-10 00:39:58,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 20:39:58] 2025-10-10 00:39:58,251 | INFO     | traces error code: 0
[2025-10-09 20:39:58] 2025-10-10 00:39:58,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 20:39:58] 2025-10-10 00:39:58,346 [wrapper] ==== pilot stdout END ====
[2025-10-09 20:39:58] 2025-10-10 00:39:58,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 20:39:58] 2025-10-10 00:39:58,354 [wrapper] pilotpid: 32310
[2025-10-09 20:39:58] 2025-10-10 00:39:58,357 [wrapper] Pilot exit status: 0
[2025-10-09 20:39:58] 2025-10-10 00:39:58,374 [wrapper] pandaids: 6837338852
[2025-10-09 20:39:58] 2025-10-10 00:39:58,413 [wrapper] cleanup supervisor_pilot 19651 32311
[2025-10-09 20:39:58] 2025-10-10 00:39:58,418 [wrapper] Test setup, not cleaning
[2025-10-09 20:39:58] 2025-10-10 00:39:58,422 [wrapper] apfmon messages muted
[2025-10-09 20:39:58] 2025-10-10 00:39:58,426 [wrapper] ==== wrapper stdout END ====
[2025-10-09 20:39:58] 2025-10-10 00:39:58,430 [wrapper] ==== wrapper stderr END ====
[2025-10-09 20:39:58]  *** Error codes and diagnostics ***
[2025-10-09 20:39:58]     "exeErrorCode": 0,
[2025-10-09 20:39:58]     "exeErrorDiag": "",
[2025-10-09 20:39:58]     "pilotErrorCode": 0,
[2025-10-09 20:39:58]     "pilotErrorDiag": "",
[2025-10-09 20:39:58]  *** Listing of results directory ***
[2025-10-09 20:39:58] total 414040
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 08:43 pilot3.tar.gz
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 08:48 queuedata.json
[2025-10-09 20:39:58] -rwx------ 1 boincer umatlas     36292 Oct  9 08:48 runpilot2-wrapper.sh
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas       100 Oct  9 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 20:39:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 19:27 run_atlas
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas       105 Oct  9 19:27 job.xml
[2025-10-09 20:39:58] -rw-r--r-- 2 boincer umatlas 224735257 Oct  9 19:27 EVNT.46676267._000736.pool.root.1
[2025-10-09 20:39:58] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 19:27 start_atlas.sh
[2025-10-09 20:39:58] drwxrwx--x 2 boincer umatlas      4096 Oct  9 19:27 shared
[2025-10-09 20:39:58] -rw-r--r-- 2 boincer umatlas    569683 Oct  9 19:27 input.tar.gz
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas         0 Oct  9 19:27 boinc_lockfile
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas      2548 Oct  9 19:27 pandaJob.out
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas    975454 Oct  9 19:27 agis_schedconf.cvmfs.json
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas   1560457 Oct  9 19:27 agis_ddmendpoints.agis.ALL.json
[2025-10-09 20:39:58] drwx------ 5 boincer umatlas      4096 Oct  9 19:27 pilot3
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas      5953 Oct  9 20:37 init_data.xml
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas 193352573 Oct  9 20:38 HITS.46676269._017757.pool.root.1
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas       529 Oct  9 20:39 boinc_task_state.xml
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas      1050 Oct  9 20:39 memory_monitor_summary.json
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas    372277 Oct  9 20:39 log.46676269._017757.job.log.tgz.1
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas      7857 Oct  9 20:39 heartbeat.json
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 20:39 boinc_mmap_file
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas        27 Oct  9 20:39 wrapper_checkpoint.txt
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas        95 Oct  9 20:39 pilot_heartbeat.json
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas      4818 Oct  9 20:39 pilotlog.txt
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas    626589 Oct  9 20:39 log.46676269._017757.job.log.1
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas       357 Oct  9 20:39 output.list
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas       620 Oct  9 20:39 runtime_log
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas   1013760 Oct  9 20:39 result.tar.gz
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas      8705 Oct  9 20:39 runtime_log.err
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas       659 Oct  9 20:39 jb8KDmwF5Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmttNMDmPs6YJn.diag
[2025-10-09 20:39:58] -rw-r--r-- 1 boincer umatlas     22168 Oct  9 20:39 stderr.txt
[2025-10-09 20:39:58] HITS file was successfully produced:
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas 193352573 Oct  9 20:38 shared/HITS.pool.root.1
[2025-10-09 20:39:58]  *** Contents of shared directory: ***
[2025-10-09 20:39:58] total 409864
[2025-10-09 20:39:58] -rw-r--r-- 2 boincer umatlas 224735257 Oct  9 19:27 ATLAS.root_0
[2025-10-09 20:39:58] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 19:27 start_atlas.sh
[2025-10-09 20:39:58] -rw-r--r-- 2 boincer umatlas    569683 Oct  9 19:27 input.tar.gz
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas 193352573 Oct  9 20:38 HITS.pool.root.1
[2025-10-09 20:39:58] -rw------- 1 boincer umatlas   1013760 Oct  9 20:39 result.tar.gz
20:40:00 (28594): run_atlas exited; CPU time 46285.204557
20:40:00 (28594): called boinc_finish(0)

</stderr_txt>
]]>

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