Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:45:16 (673910): wrapper (7.7.26015): starting
10:45:16 (673910): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 10:45:16] Arguments: --nthreads 12
[2025-10-11 10:45:16] Threads: 12
[2025-10-11 10:45:16] Checking for CVMFS
[2025-10-11 10:45:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:45:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:45:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:45:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:45:17] 2.13.2.0 4645 1234 48624 151577 2 57 3982993 4096001 0 130560 0 1243926 99.993 44087 314 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 10:45:17] CVMFS is ok
[2025-10-11 10:45:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:45:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 10:45:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 10:45:17] Further information can be found at the LHC@home message board.
[2025-10-11 10:45:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:45:17] Checking for apptainer binary...
[2025-10-11 10:45:17] apptainer is not installed, using version from CVMFS
[2025-10-11 10:45:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:45:17] ws24
[2025-10-11 10:45:17] apptainer works
[2025-10-11 10:45:17] Set ATHENA_PROC_NUMBER=12
[2025-10-11 10:45:17] Set ATHENA_CORE_NUMBER=12
[2025-10-11 10:45:17] Starting ATLAS job with PandaID=6837354104
[2025-10-11 10:45:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:46:48]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:46:48]  scope=mc23_13p6TeV
[2025-10-11 11:46:48]  status=None
[2025-10-11 11:46:48]  status_code=0
[2025-10-11 11:46:48]  storage_token=
[2025-10-11 11:46:48]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6837354104/log.46676269._023128.job.log.tgz.1
[2025-10-11 11:46:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/37/log.46676269._023128.job.log.tgz.1
[2025-10-11 11:46:48]  workdir=None
[2025-10-11 11:46:48] ]
[2025-10-11 11:46:48] 2025-10-11 09:46:08,725 | INFO     | transferring file log.46676269._023128.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6837354104/log.46676269._023128.job.log.tgz.1 to /var/lib/boinc
[2025-10-11 11:46:48] 2025-10-11 09:46:08,725 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6837354104/log.46676269._023128.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.466762
[2025-10-11 11:46:48] 2025-10-11 09:46:08,745 | INFO     | adding to output.list: log.46676269._023128.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/37/log.46676269._023128.job.log.tg
[2025-10-11 11:46:48] 2025-10-11 09:46:08,746 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 11:46:48] 2025-10-11 09:46:08,746 | INFO     | summary of transferred files:
[2025-10-11 11:46:48] 2025-10-11 09:46:08,746 | INFO     |  -- lfn=log.46676269._023128.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 11:46:48] 2025-10-11 09:46:08,746 | INFO     | stage-out finished correctly
[2025-10-11 11:46:48] 2025-10-11 09:46:08,807 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 11:46:48] 2025-10-11 09:46:08,879 | INFO     | time since job start (3641s) is within the limit (172800.0s)
[2025-10-11 11:46:48] 2025-10-11 09:46:09,722 | INFO     | monitor loop #274: job 0:6837354104 is in state 'finished'
[2025-10-11 11:46:48] 2025-10-11 09:46:09,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:46:48] 2025-10-11 09:46:10,883 | INFO     | time since job start (3643s) is within the limit (172800.0s)
[2025-10-11 11:46:48] 2025-10-11 09:46:11,766 | INFO     | job 6837354104 has state=finished
[2025-10-11 11:46:48] 2025-10-11 09:46:11,767 | INFO     | preparing for final server update for job 6837354104 in state='finished'
[2025-10-11 11:46:48] 2025-10-11 09:46:11,768 | INFO     | this job has now completed (state=finished)
[2025-10-11 11:46:48] 2025-10-11 09:46:11,768 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 11:46:48] 2025-10-11 09:46:11,768 | INFO     | log transfer has been attempted: DONE
[2025-10-11 11:46:48] 2025-10-11 09:46:11,768 | INFO     | job 6837354104 has finished - writing final server update
[2025-10-11 11:46:48] 2025-10-11 09:46:11,769 | INFO     | total number of processed events: 400 (read)
[2025-10-11 11:46:48] 2025-10-11 09:46:11,770 | INFO     | executing command: lscpu
[2025-10-11 11:46:48] 2025-10-11 09:46:11,794 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 11:46:48] 2025-10-11 09:46:12,225 | INFO     | monitor loop #275: job 0:6837354104 is in state 'finished'
[2025-10-11 11:46:48] 2025-10-11 09:46:12,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:46:48] 2025-10-11 09:46:12,888 | INFO     | time since job start (3645s) is within the limit (172800.0s)
[2025-10-11 11:46:48] 2025-10-11 09:46:14,728 | INFO     | monitor loop #276: job 0:6837354104 is in state 'finished'
[2025-10-11 11:46:48] 2025-10-11 09:46:14,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:46:48] 2025-10-11 09:46:14,894 | INFO     | time since job start (3647s) is within the limit (172800.0s)
[2025-10-11 11:46:48] 2025-10-11 09:46:15,035 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 11:46:48] 2025-10-11 09:46:15,038 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3045.3599375
[2025-10-11 11:46:48] 2025-10-11 09:46:15,040 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6837354104/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 11:46:48] 2025-10-11 09:46:15,041 | INFO     | extracted standard info from prmon json
[2025-10-11 11:46:48] 2025-10-11 09:46:15,041 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 11:46:48] 2025-10-11 09:46:15,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 11:46:48] 2025-10-11 09:46:15,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:46:48] 2025-10-11 09:46:15,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | sum of square deviations: 46147842.0
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | sum of deviations: -8314785193.999999
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | mean x: 1760174242.0
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | mean y: 2902567.169811321
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | -- intersect: 317146025451.26416
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | intersect: 317146025451.26416
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | chi2: 0.07102330734833885
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | -- intersect: 317146025451.26416
[2025-10-11 11:46:48] 2025-10-11 09:46:15,043 | INFO     | current memory leak: -180.18 B/s (using 53 data points, chi2=0.07)
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | could have reported an average CPU frequency of 3061 MHz (6 samples)
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | ..............................
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | . Timing measurements:
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | . get job = 0 s
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | . initial setup = 3 s
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | . payload setup = 4 s
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | . stage-in = 0 s
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | . payload execution = 3617 s
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | . stage-out = 0 s
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | . log creation = 0 s
[2025-10-11 11:46:48] 2025-10-11 09:46:15,044 | INFO     | ..............................
[2025-10-11 11:46:48] 2025-10-11 09:46:15,265 | INFO     | 
[2025-10-11 11:46:48] 2025-10-11 09:46:15,265 | INFO     | job summary report
[2025-10-11 11:46:48] 2025-10-11 09:46:15,265 | INFO     | --------------------------------------------------
[2025-10-11 11:46:48] 2025-10-11 09:46:15,265 | INFO     | PanDA job id: 6837354104
[2025-10-11 11:46:48] 2025-10-11 09:46:15,265 | INFO     | task id: 46676269
[2025-10-11 11:46:48] 2025-10-11 09:46:15,266 | INFO     | errors: (none)
[2025-10-11 11:46:48] 2025-10-11 09:46:15,266 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:46:48] 2025-10-11 09:46:15,266 | INFO     | pilot state: finished 
[2025-10-11 11:46:48] 2025-10-11 09:46:15,266 | INFO     | transexitcode: 0
[2025-10-11 11:46:48] 2025-10-11 09:46:15,266 | INFO     | exeerrorcode: 0
[2025-10-11 11:46:48] 2025-10-11 09:46:15,266 | INFO     | exeerrordiag: 
[2025-10-11 11:46:48] 2025-10-11 09:46:15,266 | INFO     | exitcode: 0
[2025-10-11 11:46:48] 2025-10-11 09:46:15,266 | INFO     | exitmsg: OK
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | cpuconsumptiontime: 39522 s
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | nevents: 400
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | neventsw: 0
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | pid: 684263
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | pgrp: 684263
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | corecount: 12
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | event service: False
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | sizes: {0: 2348862, 4: 2349124, 11: 2349152, 3626: 2374906, 3627: 2383974, 3633: 2384112}
[2025-10-11 11:46:48] 2025-10-11 09:46:15,267 | INFO     | --------------------------------------------------
[2025-10-11 11:46:48] 2025-10-11 09:46:15,268 | INFO     | 
[2025-10-11 11:46:48] 2025-10-11 09:46:15,268 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-11 11:46:48] 2025-10-11 09:46:15,286 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,286 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,286 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,286 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,289 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:46:48] 2025-10-11 09:46:15,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,289 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:46:48] 2025-10-11 09:46:15,289 | INFO     | job 6837354104 has completed (purged errors)
[2025-10-11 11:46:48] 2025-10-11 09:46:15,290 | INFO     | overall cleanup function is called
[2025-10-11 11:46:48] 2025-10-11 09:46:16,301 | INFO     | --- collectZombieJob: --- 10, [684263]
[2025-10-11 11:46:48] 2025-10-11 09:46:16,301 | INFO     | zombie collector waiting for pid 684263
[2025-10-11 11:46:48] 2025-10-11 09:46:16,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:46:48] 2025-10-11 09:46:16,301 | INFO     | collected zombie processes
[2025-10-11 11:46:48] 2025-10-11 09:46:16,302 | INFO     | will attempt to kill all subprocesses of pid=684263
[2025-10-11 11:46:48] 2025-10-11 09:46:16,434 | INFO     | process IDs to be killed: [684263] (in reverse order)
[2025-10-11 11:46:48] 2025-10-11 09:46:16,491 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:46:48] 2025-10-11 09:46:16,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:46:48] 2025-10-11 09:46:16,495 | INFO     | did not find any defunct processes belonging to 684263
[2025-10-11 11:46:48] 2025-10-11 09:46:16,499 | INFO     | did not find any defunct processes belonging to 684263
[2025-10-11 11:46:48] 2025-10-11 09:46:16,499 | INFO     | ready for new job
[2025-10-11 11:46:48] 2025-10-11 09:46:16,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:46:48] 2025-10-11 09:46:16,500 | INFO     | ***************************************
[2025-10-11 11:46:48] 2025-10-11 09:46:16,500 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:46:48] 2025-10-11 09:46:16,500 | INFO     | ***************************************
[2025-10-11 11:46:48] 2025-10-11 09:46:16,500 | INFO     | 
[2025-10-11 11:46:48] 2025-10-11 09:46:16,501 | INFO     | architecture information:
[2025-10-11 11:46:48] 2025-10-11 09:46:16,501 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:46:48] 2025-10-11 09:46:16,515 | INFO     | cat /etc/os-release:
[2025-10-11 11:46:48] NAME="CentOS Linux"
[2025-10-11 11:46:48] VERSION="7 (Core)"
[2025-10-11 11:46:48] ID="centos"
[2025-10-11 11:46:48] ID_LIKE="rhel fedora"
[2025-10-11 11:46:48] VERSION_ID="7"
[2025-10-11 11:46:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:46:48] ANSI_COLOR="0;31"
[2025-10-11 11:46:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:46:48] HOME_URL="https://www.centos.org/"
[2025-10-11 11:46:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:46:48] 
[2025-10-11 11:46:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:46:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:46:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:46:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:46:48] 
[2025-10-11 11:46:48] 2025-10-11 09:46:16,516 | INFO     | ***************************************
[2025-10-11 11:46:48] 2025-10-11 09:46:17,018 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-11 11:46:48] 2025-10-11 09:46:17,043 | INFO     | sufficient remaining disk space (16642998272 B)
[2025-10-11 11:46:48] 2025-10-11 09:46:17,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:46:48] 2025-10-11 09:46:17,043 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:46:48] 2025-10-11 09:46:17,043 | INFO     | update_server=False
[2025-10-11 11:46:48] 2025-10-11 09:46:17,043 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:46:48] 2025-10-11 09:46:17,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:46:48] 2025-10-11 09:46:17,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:46:48] 2025-10-11 09:46:17,114 | INFO     | all data control threads have been joined
[2025-10-11 11:46:48] 2025-10-11 09:46:17,231 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 11:46:48] 2025-10-11 09:46:17,231 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 11:46:48] 2025-10-11 09:46:17,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:46:48] 2025-10-11 09:46:17,232 | INFO     | will abort loop
[2025-10-11 11:46:48] 2025-10-11 09:46:17,243 | INFO     | all job control threads have been joined
[2025-10-11 11:46:48] 2025-10-11 09:46:17,917 | INFO     | all payload control threads have been joined
[2025-10-11 11:46:48] 2025-10-11 09:46:18,049 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,049 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,050 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,120 | INFO     | [data] control thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,225 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,237 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,248 | INFO     | [job] control thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,515 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,614 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:18,922 | INFO     | [payload] control thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:19,049 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:19,328 | INFO     | [job] validate thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:19,330 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:19,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:46:48] 2025-10-11 09:46:19,443 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:23,379 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:46:48] 2025-10-11 09:46:33,087 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:46:48] 2025-10-11 09:46:33,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123398410950464)>', '<ExcThread(monitor, started 123397874894592)>']
[2025-10-11 11:46:48] 2025-10-11 09:46:38,313 | INFO     | all workflow threads have been joined
[2025-10-11 11:46:48] 2025-10-11 09:46:38,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:46:48] 2025-10-11 09:46:38,314 | INFO     | traces error code: 0
[2025-10-11 11:46:48] 2025-10-11 09:46:38,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:46:48] 2025-10-11 09:46:48,111 | INFO     | PID=677698 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 11:46:48] 2025-10-11 09:46:48,112 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:46:48] 2025-10-11 09:46:48,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:46:48] 2025-10-11 09:46:48,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:46:48] 2025-10-11 09:46:48,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:46:48] 2025-10-11 09:46:48,112 | INFO     | [monitor] control thread has ended
[2025-10-11 11:46:48] 2025-10-11 09:46:48,215 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:46:48] 2025-10-11 09:46:48,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:46:48] 2025-10-11 09:46:48,222 [wrapper] pilotpid: 677698
[2025-10-11 11:46:48] 2025-10-11 09:46:48,226 [wrapper] Pilot exit status: 0
[2025-10-11 11:46:48] 2025-10-11 09:46:48,238 [wrapper] pandaids: 6837354104
[2025-10-11 11:46:48] 2025-10-11 09:46:48,279 [wrapper] cleanup supervisor_pilot  702156 677699
[2025-10-11 11:46:48] 2025-10-11 09:46:48,282 [wrapper] Test setup, not cleaning
[2025-10-11 11:46:48] 2025-10-11 09:46:48,286 [wrapper] apfmon messages muted
[2025-10-11 11:46:48] 2025-10-11 09:46:48,290 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:46:48] 2025-10-11 09:46:48,294 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:46:48]  *** Error codes and diagnostics ***
[2025-10-11 11:46:48]     "exeErrorCode": 0,
[2025-10-11 11:46:48]     "exeErrorDiag": "",
[2025-10-11 11:46:48]     "pilotErrorCode": 0,
[2025-10-11 11:46:48]     "pilotErrorDiag": "",
[2025-10-11 11:46:48]  *** Listing of results directory ***
[2025-10-11 11:46:48] total 412152
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc    557409 Oct  9 19:04 pilot3.tar.gz
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc      5112 Oct  9 19:09 queuedata.json
[2025-10-11 11:46:48] -rwx------ 1 boinc boinc     36292 Oct  9 19:10 runpilot2-wrapper.sh
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc       100 Oct 11 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:46:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 10:45 run_atlas
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc       105 Oct 11 10:45 job.xml
[2025-10-11 11:46:48] -rw-r--r-- 2 boinc boinc 221165982 Oct 11 10:45 EVNT.46676267._000949.pool.root.1
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc      9382 Oct 11 10:45 init_data.xml
[2025-10-11 11:46:48] -rw-r--r-- 2 boinc boinc     15120 Oct 11 10:45 start_atlas.sh
[2025-10-11 11:46:48] drwxrwx--x 2 boinc boinc      4096 Oct 11 10:45 shared
[2025-10-11 11:46:48] -rw-r--r-- 2 boinc boinc    569680 Oct 11 10:45 input.tar.gz
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc         0 Oct 11 10:45 boinc_lockfile
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc      2549 Oct 11 10:45 pandaJob.out
[2025-10-11 11:46:48] -rw------- 1 boinc boinc    975509 Oct 11 10:45 agis_schedconf.cvmfs.json
[2025-10-11 11:46:48] -rw------- 1 boinc boinc   1560580 Oct 11 10:45 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:46:48] drwx------ 5 boinc boinc      4096 Oct 11 10:45 pilot3
[2025-10-11 11:46:48] -rw------- 1 boinc boinc 195105573 Oct 11 11:45 HITS.46676269._023128.pool.root.1
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc       530 Oct 11 11:45 boinc_task_state.xml
[2025-10-11 11:46:48] -rw------- 1 boinc boinc      1018 Oct 11 11:46 memory_monitor_summary.json
[2025-10-11 11:46:48] -rw------- 1 boinc boinc    388442 Oct 11 11:46 log.46676269._023128.job.log.tgz.1
[2025-10-11 11:46:48] -rw------- 1 boinc boinc      7738 Oct 11 11:46 heartbeat.json
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc      8192 Oct 11 11:46 boinc_mmap_file
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc        27 Oct 11 11:46 wrapper_checkpoint.txt
[2025-10-11 11:46:48] -rw------- 1 boinc boinc       746 Oct 11 11:46 pilotlog.txt
[2025-10-11 11:46:48] -rw------- 1 boinc boinc        95 Oct 11 11:46 pilot_heartbeat.json
[2025-10-11 11:46:48] -rw------- 1 boinc boinc    543539 Oct 11 11:46 log.46676269._023128.job.log.1
[2025-10-11 11:46:48] -rw------- 1 boinc boinc       357 Oct 11 11:46 output.list
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc       620 Oct 11 11:46 runtime_log
[2025-10-11 11:46:48] -rw------- 1 boinc boinc    952320 Oct 11 11:46 result.tar.gz
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc      8730 Oct 11 11:46 runtime_log.err
[2025-10-11 11:46:48] -rw------- 1 boinc boinc       637 Oct 11 11:46 80WNDm9K9Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbOOMDmhRgZon.diag
[2025-10-11 11:46:48] -rw-r--r-- 1 boinc boinc     22010 Oct 11 11:46 stderr.txt
[2025-10-11 11:46:48] HITS file was successfully produced:
[2025-10-11 11:46:48] -rw------- 1 boinc boinc 195105573 Oct 11 11:45 shared/HITS.pool.root.1
[2025-10-11 11:46:48]  *** Contents of shared directory: ***
[2025-10-11 11:46:48] total 408036
[2025-10-11 11:46:48] -rw-r--r-- 2 boinc boinc 221165982 Oct 11 10:45 ATLAS.root_0
[2025-10-11 11:46:48] -rw-r--r-- 2 boinc boinc     15120 Oct 11 10:45 start_atlas.sh
[2025-10-11 11:46:48] -rw-r--r-- 2 boinc boinc    569680 Oct 11 10:45 input.tar.gz
[2025-10-11 11:46:48] -rw------- 1 boinc boinc 195105573 Oct 11 11:45 HITS.pool.root.1
[2025-10-11 11:46:48] -rw------- 1 boinc boinc    952320 Oct 11 11:46 result.tar.gz
11:46:50 (673910): run_atlas exited; CPU time 39521.291056
11:46:50 (673910): called boinc_finish(0)

</stderr_txt>
]]>

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