Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:39:53 (538659): wrapper (7.7.26015): starting
16:39:53 (538659): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 16:39:53] Arguments: --nthreads 12
[2025-10-09 16:39:53] Threads: 12
[2025-10-09 16:39:53] Checking for CVMFS
[2025-10-09 16:39:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 16:39:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 16:39:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 16:39:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 16:39:55] 2.11.5.0 2672 27846 156292 151527 1 271 28622650 45568000 15489 130560 0 267339422 99.848 126167018 24682 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 16:39:55] CVMFS is ok
[2025-10-09 16:39:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 16:39:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 16:39:55] Further information can be found at the LHC@home message board.
[2025-10-09 16:39:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 16:39:55] Checking for apptainer binary...
[2025-10-09 16:39:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 16:39:55] Running /usr/bin/apptainer --version
[2025-10-09 16:39:55] apptainer version 1.4.1-1.el9
[2025-10-09 16:39:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 16:39:55] wns0046.triumf.lcg
[2025-10-09 16:39:55] apptainer works
[2025-10-09 16:39:55] Set ATHENA_PROC_NUMBER=12
[2025-10-09 16:39:55] Set ATHENA_CORE_NUMBER=12
[2025-10-09 16:39:55] Starting ATLAS job with PandaID=6837362659
[2025-10-09 16:39:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 16:45:33]  *** The last 200 lines of the pilot log: ***
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | wrong length of table data, x=[1760053309.0], y=[919.0] (must be same and length>=4)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | INFO     | could have reported an average CPU frequency of 2657 MHz (4 samples)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | ..............................
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . Timing measurements:
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . get job = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . initial setup = 3 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . payload setup = 21 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . stage-in = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . payload execution = 50 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . stage-out = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . log creation = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | ..............................
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837362659/pilotlog.txt
[2025-10-09 16:45:33] 2025-10-09 23:44:40,266 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 16:45:33] - Log from pilotlog.txt -
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837362659/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | INFO     | extracted standard info from prmon json
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | wrong length of table data, x=[1760053309.0], y=[919.0] (must be same and length>=4)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | INFO     | could have reported an average CPU frequency of 2657 MHz (4 samples)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | ..............................
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . Timing measurements:
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . get job = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . initial setup = 3 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . payload setup = 21 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . stage-in = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . payload execution = 50 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . stage-out = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . log creation = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | ..............................
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837362659/pilotlog.txt
[2025-10-09 16:45:33] 2025-10-09 23:44:40,267 | WARNING  | 
[2025-10-09 16:45:33] [begin log extracts]
[2025-10-09 16:45:33] - Log from pilotlog.txt -
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837362659/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | INFO     | extracted standard info from prmon json
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 16:45:33] 2025-10-09 23:44:40,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | WARNING  | wrong length of table data, x=[1760053309.0], y=[919.0] (must be same and length>=4)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,216 | INFO     | could have reported an average CPU frequency of 2657 MHz (4 samples)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | ..............................
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . Timing measurements:
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . get job = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . initial setup = 3 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . payload setup = 21 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . stage-in = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . payload execution = 50 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . stage-out = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | . log creation = 0 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | ..............................
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 16:45:33] 2025-10-09 23:44:40,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837362659/pilotlog.txt
[2025-10-09 16:45:33] [end log extracts]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,267 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,268 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 16:45:33] 2025-10-09 23:44:40,386 | INFO     | 
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | job summary report
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | --------------------------------------------------
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | PanDA job id: 6837362659
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | task id: 46676269
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 16:42:15,840 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | pilot state: failed 
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | transexitcode: 65
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | exeerrorcode: 65
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | exitcode: 65
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | cpuconsumptiontime: 18 s
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | nevents: 0
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | neventsw: 0
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | pid: 549341
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | pgrp: 549341
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | corecount: 12
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | event service: False
[2025-10-09 16:45:33] 2025-10-09 23:44:40,387 | INFO     | sizes: {0: 2348854, 11: 2348854, 13: 2349144, 22: 2349200, 76: 2372581, 78: 2377057, 212: 2377195}
[2025-10-09 16:45:33] 2025-10-09 23:44:40,388 | INFO     | --------------------------------------------------
[2025-10-09 16:45:33] 2025-10-09 23:44:40,388 | INFO     | 
[2025-10-09 16:45:33] 2025-10-09 23:44:40,390 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 16:45:33] 2025-10-09 23:44:40,428 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | job 6837362659 has completed (purged errors)
[2025-10-09 16:45:33] 2025-10-09 23:44:40,429 | INFO     | overall cleanup function is called
[2025-10-09 16:45:33] 2025-10-09 23:44:41,441 | INFO     | --- collectZombieJob: --- 10, [549341]
[2025-10-09 16:45:33] 2025-10-09 23:44:41,441 | INFO     | zombie collector waiting for pid 549341
[2025-10-09 16:45:33] 2025-10-09 23:44:41,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 16:45:33] 2025-10-09 23:44:41,441 | INFO     | collected zombie processes
[2025-10-09 16:45:33] 2025-10-09 23:44:41,442 | INFO     | will attempt to kill all subprocesses of pid=549341
[2025-10-09 16:45:33] 2025-10-09 23:44:41,781 | INFO     | process IDs to be killed: [549341] (in reverse order)
[2025-10-09 16:45:33] 2025-10-09 23:44:41,857 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 16:45:33] 2025-10-09 23:44:41,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 16:45:33] 2025-10-09 23:44:41,865 | INFO     | did not find any defunct processes belonging to 549341
[2025-10-09 16:45:33] 2025-10-09 23:44:41,874 | INFO     | did not find any defunct processes belonging to 549341
[2025-10-09 16:45:33] 2025-10-09 23:44:41,874 | INFO     | ready for new job
[2025-10-09 16:45:33] 2025-10-09 23:44:41,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 16:45:33] 2025-10-09 23:44:41,875 | INFO     | ***************************************
[2025-10-09 16:45:33] 2025-10-09 23:44:41,875 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 16:45:33] 2025-10-09 23:44:41,875 | INFO     | ***************************************
[2025-10-09 16:45:33] 2025-10-09 23:44:41,875 | INFO     | 
[2025-10-09 16:45:33] 2025-10-09 23:44:41,877 | INFO     | architecture information:
[2025-10-09 16:45:33] 2025-10-09 23:44:41,877 | INFO     | executing command: cat /etc/os-release
[2025-10-09 16:45:33] 2025-10-09 23:44:41,890 | INFO     | cat /etc/os-release:
[2025-10-09 16:45:33] NAME="CentOS Linux"
[2025-10-09 16:45:33] VERSION="7 (Core)"
[2025-10-09 16:45:33] ID="centos"
[2025-10-09 16:45:33] ID_LIKE="rhel fedora"
[2025-10-09 16:45:33] VERSION_ID="7"
[2025-10-09 16:45:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 16:45:33] ANSI_COLOR="0;31"
[2025-10-09 16:45:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 16:45:33] HOME_URL="https://www.centos.org/"
[2025-10-09 16:45:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 16:45:33] 
[2025-10-09 16:45:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 16:45:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 16:45:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 16:45:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 16:45:33] 
[2025-10-09 16:45:33] 2025-10-09 23:44:41,890 | INFO     | ***************************************
[2025-10-09 16:45:33] 2025-10-09 23:44:42,394 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 16:45:33] 2025-10-09 23:44:42,453 | INFO     | sufficient remaining disk space (1832152727552 B)
[2025-10-09 16:45:33] 2025-10-09 23:44:42,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 16:45:33] 2025-10-09 23:44:42,453 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 16:45:33] 2025-10-09 23:44:42,453 | INFO     | update_server=False
[2025-10-09 16:45:33] 2025-10-09 23:44:42,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 16:45:33] 2025-10-09 23:44:42,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 16:45:33] 2025-10-09 23:44:42,455 | INFO     | aborting loop
[2025-10-09 16:45:33] 2025-10-09 23:44:42,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 16:45:33] 2025-10-09 23:44:43,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 16:45:33] 2025-10-09 23:44:43,294 | INFO     | all data control threads have been joined
[2025-10-09 16:45:33] 2025-10-09 23:44:43,460 | INFO     | [job] job monitor thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:43,474 | INFO     | [job] retrieve thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:43,499 | INFO     | all payload control threads have been joined
[2025-10-09 16:45:33] 2025-10-09 23:44:43,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:43,619 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:43,790 | INFO     | [payload] failed_post thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:43,873 | INFO     | all job control threads have been joined
[2025-10-09 16:45:33] 2025-10-09 23:44:44,074 | INFO     | [data] copytool_in thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:44,156 | INFO     | [job] validate thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:44,161 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:44,277 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:44,300 | INFO     | [data] control thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:44,465 | INFO     | [data] copytool_out thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:44,506 | INFO     | [payload] control thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:44,823 | INFO     | [payload] validate_post thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:44,879 | INFO     | [job] control thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:45,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 16:45:33] 2025-10-09 23:44:46,411 | INFO     | [job] queue monitor thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:44:47,089 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 16:45:33] 2025-10-09 23:45:12,480 | INFO     | PID=542541 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 16:45:33] 2025-10-09 23:45:12,480 | INFO     | .. there are 28 such processes running
[2025-10-09 16:45:33] 2025-10-09 23:45:12,481 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 16:45:33] 2025-10-09 23:45:12,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 16:45:33] 2025-10-09 23:45:12,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 16:45:33] 2025-10-09 23:45:26,577 | INFO     | [monitor] cgroup control has ended
[2025-10-09 16:45:33] 2025-10-09 23:45:27,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004679456576)>', '<ExcThread(monitor, started 140004282050304)>']
[2025-10-09 16:45:33] 2025-10-09 23:45:28,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 16:45:33] 2025-10-09 23:45:28,592 | INFO     | [monitor] control thread has ended
[2025-10-09 16:45:33] 2025-10-09 23:45:32,680 | INFO     | all workflow threads have been joined
[2025-10-09 16:45:33] 2025-10-09 23:45:32,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 16:45:33] 2025-10-09 23:45:32,681 | INFO     | traces error code: 0
[2025-10-09 16:45:33] 2025-10-09 23:45:32,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 16:45:33] 2025-10-09 23:45:32,850 [wrapper] ==== pilot stdout END ====
[2025-10-09 16:45:33] 2025-10-09 23:45:32,858 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 16:45:33] 2025-10-09 23:45:32,865 [wrapper] pilotpid: 542541
[2025-10-09 16:45:33] 2025-10-09 23:45:32,878 [wrapper] Pilot exit status: 0
[2025-10-09 16:45:33] 2025-10-09 23:45:32,939 [wrapper] pandaids: 6837362659
[2025-10-09 16:45:33] 2025-10-09 23:45:32,986 [wrapper] cleanup supervisor_pilot  542547 542542
[2025-10-09 16:45:33] 2025-10-09 23:45:32,988 [wrapper] Test setup, not cleaning
[2025-10-09 16:45:33] 2025-10-09 23:45:32,994 [wrapper] apfmon messages muted
[2025-10-09 16:45:33] 2025-10-09 23:45:32,998 [wrapper] ==== wrapper stdout END ====
[2025-10-09 16:45:33] 2025-10-09 23:45:33,001 [wrapper] ==== wrapper stderr END ====
[2025-10-09 16:45:33]  *** Error codes and diagnostics ***
[2025-10-09 16:45:33]     "exeErrorCode": 65,
[2025-10-09 16:45:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 16:45:33]     "pilotErrorCode": 1305,
[2025-10-09 16:45:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 16:45:33]  *** Listing of results directory ***
[2025-10-09 16:45:33] total 218908
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc      5112 Oct  9 13:21 queuedata.json
[2025-10-09 16:45:33] -rwx------. 1 boinc boinc     36292 Oct  9 13:22 runpilot2-wrapper.sh
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc    557409 Oct  9 13:22 pilot3.tar.gz
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc       100 Oct  9 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 16:45:33] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 16:39 run_atlas
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc       105 Oct  9 16:39 job.xml
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc      6594 Oct  9 16:39 init_data.xml
[2025-10-09 16:45:33] -rw-r--r--. 2 boinc boinc 220028640 Oct  9 16:39 EVNT.46676267._001087.pool.root.1
[2025-10-09 16:45:33] -rw-r--r--. 2 boinc boinc     15120 Oct  9 16:39 start_atlas.sh
[2025-10-09 16:45:33] drwxrwx--x. 2 boinc boinc      4096 Oct  9 16:39 shared
[2025-10-09 16:45:33] -rw-r--r--. 2 boinc boinc    569676 Oct  9 16:39 input.tar.gz
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc         0 Oct  9 16:39 boinc_lockfile
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc      2550 Oct  9 16:39 pandaJob.out
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc    975454 Oct  9 16:40 agis_schedconf.cvmfs.json
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc   1560580 Oct  9 16:40 agis_ddmendpoints.agis.ALL.json
[2025-10-09 16:45:33] drwx------. 5 boinc boinc      4096 Oct  9 16:40 pilot3
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc       524 Oct  9 16:42 boinc_task_state.xml
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc       976 Oct  9 16:42 memory_monitor_summary.json
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc     22214 Oct  9 16:42 log.46676269._025787.job.log.tgz.1
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc        95 Oct  9 16:44 pilot_heartbeat.json
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc      8420 Oct  9 16:44 heartbeat.json
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc        22 Oct  9 16:45 wrapper_checkpoint.txt
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc      8192 Oct  9 16:45 boinc_mmap_file
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc      4822 Oct  9 16:45 pilotlog.txt
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc     92815 Oct  9 16:45 log.46676269._025787.job.log.1
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc       188 Oct  9 16:45 output.list
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc       620 Oct  9 16:45 runtime_log
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc    133120 Oct  9 16:45 result.tar.gz
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc      8528 Oct  9 16:45 runtime_log.err
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc       646 Oct  9 16:45 E5ZNDm0KCR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdgOMDmz6PSLn.diag
[2025-10-09 16:45:33] -rw-r--r--. 1 boinc boinc     21763 Oct  9 16:45 stderr.txt
[2025-10-09 16:45:33] No HITS result produced
[2025-10-09 16:45:33]  *** Contents of shared directory: ***
[2025-10-09 16:45:33] total 215584
[2025-10-09 16:45:33] -rw-r--r--. 2 boinc boinc 220028640 Oct  9 16:39 ATLAS.root_0
[2025-10-09 16:45:33] -rw-r--r--. 2 boinc boinc     15120 Oct  9 16:39 start_atlas.sh
[2025-10-09 16:45:33] -rw-r--r--. 2 boinc boinc    569676 Oct  9 16:39 input.tar.gz
[2025-10-09 16:45:33] -rw-------. 1 boinc boinc    133120 Oct  9 16:45 result.tar.gz
16:45:35 (538659): run_atlas exited; CPU time 27.007219
16:45:35 (538659): called boinc_finish(0)

</stderr_txt>
]]>

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