Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:12:05 (3922750): wrapper (7.7.26015): starting
18:12:05 (3922750): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 18:12:05] Arguments: --nthreads 8
[2025-10-09 18:12:05] Threads: 8
[2025-10-09 18:12:05] Checking for CVMFS
[2025-10-09 18:12:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 18:12:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 18:12:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 18:12:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 18:12:08] 2.13.2.0 1270615 125524 622548 151525 2 417 16361505 21042176 27722 16776704 0 77616163 99.353 122946639 29357 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 18:12:08] CVMFS is ok
[2025-10-09 18:12:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 18:12:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 18:12:08] Further information can be found at the LHC@home message board.
[2025-10-09 18:12:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 18:12:08] Checking for apptainer binary...
[2025-10-09 18:12:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 18:12:08] Running /usr/bin/apptainer --version
[2025-10-09 18:12:08] apptainer version 1.4.3-1.el9
[2025-10-09 18:12:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 18:12:10] c-16-12.aglt2.org
[2025-10-09 18:12:10] apptainer works
[2025-10-09 18:12:10] Set ATHENA_PROC_NUMBER=8
[2025-10-09 18:12:10] Set ATHENA_CORE_NUMBER=8
[2025-10-09 18:12:11] Starting ATLAS job with PandaID=6837353975
[2025-10-09 18:12:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 23:40:17]  *** The last 200 lines of the pilot log: ***
[2025-10-10 23:40:17] 2025-10-11 03:39:23,491 | INFO     | monitor loop #3711: job 0:6837353975 is in state 'finished'
[2025-10-10 23:40:17] 2025-10-11 03:39:23,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 23:40:17] 2025-10-11 03:39:23,528 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 23:40:17] 2025-10-11 03:39:23,555 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.10855
[2025-10-10 23:40:17] 2025-10-11 03:39:23,565 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837353975/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 23:40:17] 2025-10-11 03:39:23,566 | INFO     | extracted standard info from prmon json
[2025-10-10 23:40:17] 2025-10-11 03:39:23,566 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 23:40:17] 2025-10-11 03:39:23,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 23:40:17] 2025-10-11 03:39:23,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 23:40:17] 2025-10-11 03:39:23,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 23:40:17] 2025-10-11 03:39:23,616 | INFO     | fitting pss+swap vs Time
[2025-10-10 23:40:17] 2025-10-11 03:39:23,619 | INFO     | sum of square deviations: 1613865752614.6667
[2025-10-10 23:40:17] 2025-10-11 03:39:24,203 | INFO     | sum of deviations: -412480923827.50037
[2025-10-10 23:40:17] 2025-10-11 03:39:24,203 | INFO     | mean x: 1760101039.0438545
[2025-10-10 23:40:17] 2025-10-11 03:39:24,203 | INFO     | mean y: 2049031.9671090594
[2025-10-10 23:40:17] 2025-10-11 03:39:24,204 | INFO     | -- intersect: 451905596.20631385
[2025-10-10 23:40:17] 2025-10-11 03:39:24,204 | INFO     | intersect: 451905596.20631385
[2025-10-10 23:40:17] 2025-10-11 03:39:24,206 | INFO     | chi2: 6.811599842966338
[2025-10-10 23:40:17] 2025-10-11 03:39:24,213 | INFO     | sum of square deviations: 1599937522264.2031
[2025-10-10 23:40:17] 2025-10-11 03:39:24,696 | INFO     | sum of deviations: -196516612100.48386
[2025-10-10 23:40:17] 2025-10-11 03:39:24,697 | INFO     | mean x: 1760100886.546875
[2025-10-10 23:40:17] 2025-10-11 03:39:24,697 | INFO     | mean y: 2051393.7899305555
[2025-10-10 23:40:17] 2025-10-11 03:39:24,697 | INFO     | -- intersect: 218240500.15563035
[2025-10-10 23:40:17] 2025-10-11 03:39:24,697 | INFO     | intersect: 218240500.15563035
[2025-10-10 23:40:17] 2025-10-11 03:39:24,704 | INFO     | chi2: 5.456808293865319
[2025-10-10 23:40:17] 2025-10-11 03:39:24,704 | INFO     | current chi2=5.456808293865319 (change=19.889476486202827 %)
[2025-10-10 23:40:17] 2025-10-11 03:39:24,704 | INFO     | right removable region: 1727
[2025-10-10 23:40:17] 2025-10-11 03:39:24,711 | INFO     | sum of square deviations: 1599936630202.3894
[2025-10-10 23:40:17] 2025-10-11 03:39:24,870 | INFO     | sum of deviations: -751283495950.1504
[2025-10-10 23:40:17] 2025-10-11 03:39:24,870 | INFO     | mean x: 1760101191.5457175
[2025-10-10 23:40:17] 2025-10-11 03:39:24,871 | INFO     | mean y: 2052739.3310185184
[2025-10-10 23:40:17] 2025-10-11 03:39:24,871 | INFO     | -- intersect: 828544833.7355443
[2025-10-10 23:40:17] 2025-10-11 03:39:24,871 | INFO     | intersect: 828544833.7355443
[2025-10-10 23:40:17] 2025-10-11 03:39:24,913 | INFO     | chi2: 4.57992587681201
[2025-10-10 23:40:17] 2025-10-11 03:39:24,914 | INFO     | current chi2=4.57992587681201 (change=32.76284599217548 %)
[2025-10-10 23:40:17] 2025-10-11 03:39:24,945 | INFO     | sum of square deviations: 1586088092086.2876
[2025-10-10 23:40:17] 2025-10-11 03:39:25,205 | INFO     | sum of deviations: -869919786638.0715
[2025-10-10 23:40:17] 2025-10-11 03:39:25,205 | INFO     | mean x: 1760101344.0464306
[2025-10-10 23:40:17] 2025-10-11 03:39:25,206 | INFO     | mean y: 2054045.6633778294
[2025-10-10 23:40:17] 2025-10-11 03:39:25,206 | INFO     | -- intersect: 967414666.749836
[2025-10-10 23:40:17] 2025-10-11 03:39:25,206 | INFO     | intersect: 967414666.749836
[2025-10-10 23:40:17] 2025-10-11 03:39:25,213 | INFO     | chi2: 4.312894480961372
[2025-10-10 23:40:17] 2025-10-11 03:39:25,213 | INFO     | current chi2=4.312894480961372 (change=5.830474183056272 %)
[2025-10-10 23:40:17] 2025-10-11 03:39:25,213 | INFO     | left removable region: 20
[2025-10-10 23:40:17] 2025-10-11 03:39:25,220 | INFO     | sum of square deviations: 1542310566115.2551
[2025-10-10 23:40:17] 2025-10-11 03:39:25,342 | INFO     | time since job start (105929s) is within the limit (172800.0s)
[2025-10-10 23:40:17] 2025-10-11 03:39:25,469 | INFO     | sum of deviations: -707787468477.0128
[2025-10-10 23:40:17] 2025-10-11 03:39:25,469 | INFO     | mean x: 1760101466.0527241
[2025-10-10 23:40:17] 2025-10-11 03:39:25,470 | INFO     | mean y: 2057209.0890451083
[2025-10-10 23:40:17] 2025-10-11 03:39:25,470 | INFO     | -- intersect: 809791908.1114215
[2025-10-10 23:40:17] 2025-10-11 03:39:25,470 | INFO     | intersect: 809791908.1114215
[2025-10-10 23:40:17] 2025-10-11 03:39:25,472 | INFO     | chi2: 2.848322249111967
[2025-10-10 23:40:17] 2025-10-11 03:39:25,477 | INFO     | -- intersect: 809791908.1114215
[2025-10-10 23:40:17] 2025-10-11 03:39:25,477 | INFO     | current memory leak: -0.46 B/s (using 1707 data points, chi2=2.85)
[2025-10-10 23:40:17] 2025-10-11 03:39:25,479 | INFO     | could have reported an average CPU frequency of 2900 MHz (60 samples)
[2025-10-10 23:40:17] 2025-10-11 03:39:25,479 | INFO     | ..............................
[2025-10-10 23:40:17] 2025-10-11 03:39:25,479 | INFO     | . Timing measurements:
[2025-10-10 23:40:17] 2025-10-11 03:39:25,479 | INFO     | . get job = 0 s
[2025-10-10 23:40:17] 2025-10-11 03:39:25,480 | INFO     | . initial setup = 8 s
[2025-10-10 23:40:17] 2025-10-11 03:39:25,480 | INFO     | . payload setup = 49 s
[2025-10-10 23:40:17] 2025-10-11 03:39:25,480 | INFO     | . stage-in = 0 s
[2025-10-10 23:40:17] 2025-10-11 03:39:25,480 | INFO     | . payload execution = 105699 s
[2025-10-10 23:40:17] 2025-10-11 03:39:25,480 | INFO     | . stage-out = 13 s
[2025-10-10 23:40:17] 2025-10-11 03:39:25,480 | INFO     | . log creation = 1 s
[2025-10-10 23:40:17] 2025-10-11 03:39:25,480 | INFO     | ..............................
[2025-10-10 23:40:17] 2025-10-11 03:39:25,887 | INFO     | 
[2025-10-10 23:40:17] 2025-10-11 03:39:25,887 | INFO     | job summary report
[2025-10-10 23:40:17] 2025-10-11 03:39:25,887 | INFO     | --------------------------------------------------
[2025-10-10 23:40:17] 2025-10-11 03:39:25,887 | INFO     | PanDA job id: 6837353975
[2025-10-10 23:40:17] 2025-10-11 03:39:25,888 | INFO     | task id: 46676269
[2025-10-10 23:40:17] 2025-10-11 03:39:25,888 | INFO     | errors: (none)
[2025-10-10 23:40:17] 2025-10-11 03:39:25,888 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 23:40:17] 2025-10-11 03:39:25,888 | INFO     | pilot state: finished 
[2025-10-10 23:40:17] 2025-10-11 03:39:25,888 | INFO     | transexitcode: 0
[2025-10-10 23:40:17] 2025-10-11 03:39:25,888 | INFO     | exeerrorcode: 0
[2025-10-10 23:40:17] 2025-10-11 03:39:25,888 | INFO     | exeerrordiag: 
[2025-10-10 23:40:17] 2025-10-11 03:39:25,889 | INFO     | exitcode: 0
[2025-10-10 23:40:17] 2025-10-11 03:39:25,889 | INFO     | exitmsg: OK
[2025-10-10 23:40:17] 2025-10-11 03:39:25,889 | INFO     | cpuconsumptiontime: 79830 s
[2025-10-10 23:40:17] 2025-10-11 03:39:25,889 | INFO     | nevents: 400
[2025-10-10 23:40:17] 2025-10-11 03:39:25,889 | INFO     | neventsw: 0
[2025-10-10 23:40:17] 2025-10-11 03:39:25,889 | INFO     | pid: 3938171
[2025-10-10 23:40:17] 2025-10-11 03:39:25,889 | INFO     | pgrp: 3938171
[2025-10-10 23:40:17] 2025-10-11 03:39:25,894 | INFO     | corecount: 8
[2025-10-10 23:40:17] 2025-10-11 03:39:25,894 | INFO     | event service: False
[2025-10-10 23:40:17] 2025-10-11 03:39:25,894 | INFO     | sizes: {0: 2348026, 2: 2348711, 3: 2348711, 4: 2348938, 6: 2348938, 17: 2348966, 28: 2349122, 40: 2349150, 50: 2349440, 52: 2349468, 105758: 2349468, 105761: 24152
[2025-10-10 23:40:17] 2025-10-11 03:39:25,894 | INFO     | --------------------------------------------------
[2025-10-10 23:40:17] 2025-10-11 03:39:25,894 | INFO     | 
[2025-10-10 23:40:17] 2025-10-11 03:39:25,895 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 23:40:17] 2025-10-11 03:39:26,030 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 23:40:17] 2025-10-11 03:39:26,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,096 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 23:40:17] 2025-10-11 03:39:26,097 | INFO     | job 6837353975 has completed (purged errors)
[2025-10-10 23:40:17] 2025-10-11 03:39:26,097 | INFO     | overall cleanup function is called
[2025-10-10 23:40:17] 2025-10-11 03:39:27,182 | INFO     | --- collectZombieJob: --- 10, [3938171]
[2025-10-10 23:40:17] 2025-10-11 03:39:27,182 | INFO     | zombie collector waiting for pid 3938171
[2025-10-10 23:40:17] 2025-10-11 03:39:27,182 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 23:40:17] 2025-10-11 03:39:27,182 | INFO     | collected zombie processes
[2025-10-10 23:40:17] 2025-10-11 03:39:27,182 | INFO     | will attempt to kill all subprocesses of pid=3938171
[2025-10-10 23:40:17] 2025-10-11 03:39:30,791 | INFO     | process IDs to be killed: [3938171] (in reverse order)
[2025-10-10 23:40:17] 2025-10-11 03:39:31,211 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 23:40:17] 2025-10-11 03:39:31,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 23:40:17] 2025-10-11 03:39:31,261 | INFO     | did not find any defunct processes belonging to 3938171
[2025-10-10 23:40:17] 2025-10-11 03:39:31,297 | INFO     | did not find any defunct processes belonging to 3938171
[2025-10-10 23:40:17] 2025-10-11 03:39:31,298 | INFO     | ready for new job
[2025-10-10 23:40:17] 2025-10-11 03:39:31,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 23:40:17] 2025-10-11 03:39:31,305 | INFO     | ***************************************
[2025-10-10 23:40:17] 2025-10-11 03:39:31,305 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 23:40:17] 2025-10-11 03:39:31,305 | INFO     | ***************************************
[2025-10-10 23:40:17] 2025-10-11 03:39:31,306 | INFO     | 
[2025-10-10 23:40:17] 2025-10-11 03:39:31,323 | INFO     | architecture information:
[2025-10-10 23:40:17] 2025-10-11 03:39:31,327 | INFO     | executing command: cat /etc/os-release
[2025-10-10 23:40:17] 2025-10-11 03:39:31,415 | INFO     | cat /etc/os-release:
[2025-10-10 23:40:17] NAME="CentOS Linux"
[2025-10-10 23:40:17] VERSION="7 (Core)"
[2025-10-10 23:40:17] ID="centos"
[2025-10-10 23:40:17] ID_LIKE="rhel fedora"
[2025-10-10 23:40:17] VERSION_ID="7"
[2025-10-10 23:40:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 23:40:17] ANSI_COLOR="0;31"
[2025-10-10 23:40:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 23:40:17] HOME_URL="https://www.centos.org/"
[2025-10-10 23:40:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 23:40:17] 
[2025-10-10 23:40:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 23:40:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 23:40:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 23:40:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 23:40:17] 
[2025-10-10 23:40:17] 2025-10-11 03:39:31,415 | INFO     | ***************************************
[2025-10-10 23:40:17] 2025-10-11 03:39:31,919 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 23:40:17] 2025-10-11 03:39:31,996 | INFO     | sufficient remaining disk space (52987691008 B)
[2025-10-10 23:40:17] 2025-10-11 03:39:31,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 23:40:17] 2025-10-11 03:39:31,997 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 23:40:17] 2025-10-11 03:39:31,997 | INFO     | update_server=False
[2025-10-10 23:40:17] 2025-10-11 03:39:31,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 23:40:17] 2025-10-11 03:39:32,254 | INFO     | all job control threads have been joined
[2025-10-10 23:40:17] 2025-10-11 03:39:32,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:40:17] 2025-10-11 03:39:32,382 | INFO     | aborting loop
[2025-10-10 23:40:17] 2025-10-11 03:39:32,396 | INFO     | all data control threads have been joined
[2025-10-10 23:40:17] 2025-10-11 03:39:32,667 | INFO     | all payload control threads have been joined
[2025-10-10 23:40:17] 2025-10-11 03:39:32,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 23:40:17] 2025-10-11 03:39:33,002 | INFO     | [job] retrieve thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,263 | INFO     | [job] control thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,291 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,388 | INFO     | [job] job monitor thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,405 | INFO     | [data] control thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,449 | INFO     | [job] validate thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,450 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,559 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,673 | INFO     | [payload] control thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:33,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 23:40:17] 2025-10-11 03:39:34,342 | INFO     | [payload] failed_post thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:34,357 | INFO     | [payload] validate_post thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:34,381 | INFO     | [data] copytool_in thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:34,947 | INFO     | [data] copytool_out thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:34,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:40:17] 2025-10-11 03:39:35,976 | INFO     | [job] queue monitor thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:39:37,859 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 23:40:17] 2025-10-11 03:40:06,048 | INFO     | PID=3927989 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 23:40:17] 2025-10-11 03:40:06,060 | INFO     | .. there are 39 such processes running
[2025-10-10 23:40:17] 2025-10-11 03:40:06,061 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 23:40:17] 2025-10-11 03:40:06,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 23:40:17] 2025-10-11 03:40:06,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 23:40:17] 2025-10-11 03:40:06,527 | INFO     | [monitor] cgroup control has ended
[2025-10-10 23:40:17] 2025-10-11 03:40:08,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029455861568)>', '<ExcThread(monitor, started 140028734854912)>']
[2025-10-10 23:40:17] 2025-10-11 03:40:09,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 23:40:17] 2025-10-11 03:40:09,116 | INFO     | [monitor] control thread has ended
[2025-10-10 23:40:17] 2025-10-11 03:40:13,509 | INFO     | all workflow threads have been joined
[2025-10-10 23:40:17] 2025-10-11 03:40:13,513 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 23:40:17] 2025-10-11 03:40:13,514 | INFO     | traces error code: 0
[2025-10-10 23:40:17] 2025-10-11 03:40:13,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 23:40:17] 2025-10-11 03:40:15,146 [wrapper] ==== pilot stdout END ====
[2025-10-10 23:40:17] 2025-10-11 03:40:15,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 23:40:17] 2025-10-11 03:40:15,226 [wrapper] pilotpid: 3927989
[2025-10-10 23:40:17] 2025-10-11 03:40:15,295 [wrapper] Pilot exit status: 0
[2025-10-10 23:40:17] 2025-10-11 03:40:15,492 [wrapper] pandaids: 6837353975
[2025-10-10 23:40:17] 2025-10-11 03:40:16,804 [wrapper] cleanup supervisor_pilot  788131 3927990
[2025-10-10 23:40:17] 2025-10-11 03:40:16,855 [wrapper] Test setup, not cleaning
[2025-10-10 23:40:17] 2025-10-11 03:40:16,881 [wrapper] apfmon messages muted
[2025-10-10 23:40:17] 2025-10-11 03:40:16,892 [wrapper] ==== wrapper stdout END ====
[2025-10-10 23:40:17] 2025-10-11 03:40:16,946 [wrapper] ==== wrapper stderr END ====
[2025-10-10 23:40:17]  *** Error codes and diagnostics ***
[2025-10-10 23:40:17]     "exeErrorCode": 0,
[2025-10-10 23:40:17]     "exeErrorDiag": "",
[2025-10-10 23:40:17]     "pilotErrorCode": 0,
[2025-10-10 23:40:17]     "pilotErrorDiag": "",
[2025-10-10 23:40:17]  *** Listing of results directory ***
[2025-10-10 23:40:17] total 422448
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 12:54 pilot3.tar.gz
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 13:02 queuedata.json
[2025-10-10 23:40:17] -rwx------. 1 boincer umatlas     36292 Oct  9 13:02 runpilot2-wrapper.sh
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas       100 Oct  9 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 23:40:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 18:12 run_atlas
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas       105 Oct  9 18:12 job.xml
[2025-10-10 23:40:17] -rw-r--r--. 2 boincer umatlas 218091889 Oct  9 18:12 EVNT.46676267._000945.pool.root.1
[2025-10-10 23:40:17] -rw-r--r--. 2 boincer umatlas    569683 Oct  9 18:12 input.tar.gz
[2025-10-10 23:40:17] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 18:12 start_atlas.sh
[2025-10-10 23:40:17] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 18:12 shared
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas         0 Oct  9 18:12 boinc_lockfile
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas      2548 Oct  9 18:12 pandaJob.out
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas    975454 Oct  9 18:13 agis_schedconf.cvmfs.json
[2025-10-10 23:40:17] drwx------. 5 boincer umatlas      4096 Oct  9 18:13 pilot3
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas      6524 Oct 10 23:31 init_data.xml
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas 189287057 Oct 10 23:35 HITS.46676269._023017.pool.root.1
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas       532 Oct 10 23:35 boinc_task_state.xml
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas      1040 Oct 10 23:38 memory_monitor_summary.json
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas   1560580 Oct 10 23:38 agis_ddmendpoints.agis.ALL.json
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas   1333442 Oct 10 23:38 log.46676269._023017.job.log.tgz.1
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas      7826 Oct 10 23:39 heartbeat.json
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 23:39 boinc_mmap_file
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas        28 Oct 10 23:39 wrapper_checkpoint.txt
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas        95 Oct 10 23:40 pilot_heartbeat.json
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas      4824 Oct 10 23:40 pilotlog.txt
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas   9319725 Oct 10 23:40 log.46676269._023017.job.log.1
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas       357 Oct 10 23:40 output.list
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas       620 Oct 10 23:40 runtime_log
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas  10670080 Oct 10 23:40 result.tar.gz
[2025-10-10 23:40:17] -rw-------. 1 boincer umatlas       659 Oct 10 23:40 UX6MDmAD9Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyMOMDm6AsZgn.diag
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas      8700 Oct 10 23:40 runtime_log.err
[2025-10-10 23:40:17] -rw-r--r--. 1 boincer umatlas     21244 Oct 10 23:40 stderr.txt
[2025-10-10 23:40:18] HITS file was successfully produced:
[2025-10-10 23:40:18] -rw-------. 1 boincer umatlas 189287057 Oct 10 23:35 shared/HITS.pool.root.1
[2025-10-10 23:40:18]  *** Contents of shared directory: ***
[2025-10-10 23:40:18] total 408836
[2025-10-10 23:40:18] -rw-r--r--. 2 boincer umatlas 218091889 Oct  9 18:12 ATLAS.root_0
[2025-10-10 23:40:18] -rw-r--r--. 2 boincer umatlas    569683 Oct  9 18:12 input.tar.gz
[2025-10-10 23:40:18] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 18:12 start_atlas.sh
[2025-10-10 23:40:18] -rw-------. 1 boincer umatlas 189287057 Oct 10 23:35 HITS.pool.root.1
[2025-10-10 23:40:18] -rw-------. 1 boincer umatlas  10670080 Oct 10 23:40 result.tar.gz
23:40:19 (3922750): run_atlas exited; CPU time 84571.757611
23:40:19 (3922750): called boinc_finish(0)

</stderr_txt>
]]>

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