Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 00:36:35 (21516): vboxwrapper version 26210
2025-10-13 00:36:35 (21516): BOINC client version: 8.0.2
2025-10-13 00:36:35 (21516): Detected: VirtualBox VboxManage Interface (Version: 6.1.8)
2025-10-13 00:36:36 (21516): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 00:36:36 (21516): Create VM. (boinc_6ae01787961a1b46, slot#6)
2025-10-13 00:36:36 (21516): Setting Memory Size for VM. (4700MB)
2025-10-13 00:36:37 (21516): Setting CPU Count for VM. (7)
2025-10-13 00:36:37 (21516): Setting Chipset Options for VM.
2025-10-13 00:36:37 (21516): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 00:36:37 (21516): Setting Boot Options for VM.
2025-10-13 00:36:38 (21516): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 00:36:38 (21516): Enabling VM Network Access.
2025-10-13 00:36:39 (21516): Disabling USB Support for VM.
2025-10-13 00:36:39 (21516): Disabling COM Port Support for VM.
2025-10-13 00:36:39 (21516): Disabling LPT Port Support for VM.
2025-10-13 00:36:39 (21516): Disabling Audio Support for VM.
2025-10-13 00:36:40 (21516): Disabling Clipboard Support for VM.
2025-10-13 00:36:40 (21516): Disabling Drag and Drop Support for VM.
2025-10-13 00:36:40 (21516): Adding storage controller(s) to VM.
2025-10-13 00:36:40 (21516): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 00:36:41 (21516): Adding VirtualBox Guest Additions to VM.
2025-10-13 00:36:41 (21516): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 00:36:41 (21516): forwarding host port 62836 to guest port 80
2025-10-13 00:36:42 (21516): Enabling remote desktop for VM.
2025-10-13 00:36:42 (21516): Enabling shared directory for VM.
2025-10-13 00:36:43 (21516): Starting VM using VBoxManage interface. (boinc_6ae01787961a1b46, slot#6)
2025-10-13 00:36:49 (21516): Successfully started VM. (PID = '22576')
2025-10-13 00:36:49 (21516): Reporting VM Process ID to BOINC.
2025-10-13 00:36:49 (21516): Guest Log: BIOS: VirtualBox 6.1.8
2025-10-13 00:36:49 (21516): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 00:36:49 (21516): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 00:36:49 (21516): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 00:36:49 (21516): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 00:36:49 (21516): Detected: Web Application Enabled (http://localhost:62836)
2025-10-13 00:36:49 (21516): Detected: Remote Desktop Enabled (localhost:62837)
2025-10-13 00:36:49 (21516): Preference change detected
2025-10-13 00:36:49 (21516): Setting CPU throttle for VM. (80%)
2025-10-13 00:36:49 (21516): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 00:36:51 (21516): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 00:36:51 (21516): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 00:36:54 (21516): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 00:36:54 (21516): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 00:36:54 (21516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 00:37:03 (21516): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 00:37:03 (21516): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-13 00:37:16 (21516): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 00:37:16 (21516): Guest Log: 00:00:00.000261 main     Log opened 2025-10-13T00:37:14.830257000Z
2025-10-13 00:37:16 (21516): Guest Log: 00:00:00.000421 main     OS Product: Linux
2025-10-13 00:37:16 (21516): Guest Log: 00:00:00.000567 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 00:37:16 (21516): Guest Log: 00:00:00.000641 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 00:37:16 (21516): Guest Log: 00:00:00.000703 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 00:37:16 (21516): Guest Log: 00:00:00.000705 main     Process ID: 1354
2025-10-13 00:37:16 (21516): Guest Log: 00:00:00.000706 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 00:37:16 (21516): Guest Log: 00:00:00.003481 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 00:37:16 (21516): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 00:37:16 (21516): Guest Log: [INFO] Mounting shared directory
2025-10-13 00:37:17 (21516): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 00:37:21 (21516): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 00:37:21 (21516): Guest Log: [INFO] Detected branch: prod
2025-10-13 00:37:22 (21516): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 00:37:22 (21516): Guest Log: Copying input files
2025-10-13 00:37:25 (21516): Guest Log: Copied input files into RunAtlas.
2025-10-13 00:37:25 (21516): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 00:37:25 (21516): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 00:37:25 (21516): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 00:37:25 (21516): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 00:37:26 (21516): Guest Log: 00:00:10.017167 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 512 150 000ns (GuestNow=1 760 308 646 324 473 000 ns GuestLast=1 760 315 834 836 623 000 ns fSetTimeLastLoop=true )
2025-10-13 00:38:00 (21516): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 00:38:00 (21516): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 00:38:00 (21516): Guest Log: 2.6.3.0 1629 0 32160 151640 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 00:38:02 (21516): Guest Log: copied the webapp to /var/www
2025-10-13 00:38:02 (21516): Guest Log: ATHENA_PROC_NUMBER=7
2025-10-13 00:38:02 (21516): Guest Log: ATHENA_CORE_NUMBER=7
2025-10-13 00:38:02 (21516): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 00:38:02 (21516): Guest Log:  *** Starting ATLAS job. (PandaID=6837353863 taskID=46676269) ***
2025-10-13 02:16:55 (21516): Status Report: Elapsed Time: '6000.000000'
2025-10-13 02:16:55 (21516): Status Report: CPU Time: '28225.687500'
2025-10-13 03:57:01 (21516): Status Report: Elapsed Time: '12000.000000'
2025-10-13 03:57:01 (21516): Status Report: CPU Time: '61887.156250'
2025-10-13 05:37:07 (21516): Status Report: Elapsed Time: '18000.000000'
2025-10-13 05:37:07 (21516): Status Report: CPU Time: '95723.984375'
2025-10-13 07:17:13 (21516): Status Report: Elapsed Time: '24000.000000'
2025-10-13 07:17:13 (21516): Status Report: CPU Time: '129517.984375'
2025-10-13 07:40:38 (21516): Guest Log:  *** Job finished ***
2025-10-13 07:40:38 (21516): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:31,100 | INFO     | found 0 job(s) in 20 queues
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:31,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:31,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:31,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083168454464)>', '<ExcThread(monitor, started 140081901860608)>']
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:32,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:32,119 | INFO     | [monitor] control thread has ended
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,458 | INFO     | all workflow threads have been joined
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,458 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,459 | INFO     | traces error code: 0
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,641 [wrapper] ==== pilot stdout END ====
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,653 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,665 [wrapper] pilotpid: 6049
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,677 [wrapper] Pilot exit status: 0
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,756 [wrapper] pandaids: 6837353863
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,839 [wrapper] cleanup supervisor_pilot 30729 6050
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,852 [wrapper] Test setup, not cleaning
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,866 [wrapper] apfmon messages muted
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,878 [wrapper] ==== wrapper stdout END ====
2025-10-13 07:40:38 (21516): Guest Log: 2025-10-13 05:40:36,891 [wrapper] ==== wrapper stderr END ====
2025-10-13 07:40:38 (21516): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 07:40:38 (21516): Guest Log:     "exeErrorCode": 0,
2025-10-13 07:40:38 (21516): Guest Log:     "exeErrorDiag": "",
2025-10-13 07:40:38 (21516): Guest Log:     "pilotErrorCode": 0,
2025-10-13 07:40:38 (21516): Guest Log:     "pilotErrorDiag": "",
2025-10-13 07:40:38 (21516): Guest Log:  *** Listing of results directory ***
2025-10-13 07:40:38 (21516): Guest Log: total 196972
2025-10-13 07:40:38 (21516): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 16:54 pilot3.tar.gz
2025-10-13 07:40:38 (21516): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 16:55 runpilot2-wrapper.sh
2025-10-13 07:40:38 (21516): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 16:55 queuedata.json
2025-10-13 07:40:38 (21516): Guest Log: -rwxr-xr-x. 1 atlas atlas     11338 Oct 12 22:37 init_data.xml
2025-10-13 07:40:38 (21516): Guest Log: -rwxr-xr-x. 1 atlas atlas    569672 Oct 12 22:37 input.tar.gz
2025-10-13 07:40:38 (21516): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 22:37 start_atlas.sh
2025-10-13 07:40:38 (21516): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 22:37 EVNT.46676267._000941.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 07:40:38 (21516): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Oct 12 22:38 pandaJob.out
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas    975603 Oct 12 22:39 agis_schedconf.cvmfs.json
2025-10-13 07:40:38 (21516): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 22:39 pilot3
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas 190332711 Oct 13 05:38 HITS.46676269._022905.pool.root.1
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas      1034 Oct 13 05:39 memory_monitor_summary.json
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 05:39 agis_ddmendpoints.agis.ALL.json
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas    572831 Oct 13 05:39 log.46676269._022905.job.log.tgz.1
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas      7834 Oct 13 05:39 heartbeat.json
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 05:40 pilot_heartbeat.json
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 13 05:40 pilotlog.txt
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas   3193647 Oct 13 05:40 log.46676269._022905.job.log.1
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 05:40 output.list
2025-10-13 07:40:38 (21516): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 05:40 runtime_log
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas   3788800 Oct 13 05:40 result.tar.gz
2025-10-13 07:40:38 (21516): Guest Log: -rw-r--r--. 1 atlas atlas      8631 Oct 13 05:40 runtime_log.err
2025-10-13 07:40:38 (21516): Guest Log: -rw-------. 1 atlas atlas       657 Oct 13 05:40 QZNKDm458Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmppaNDmNIxCCo.diag
2025-10-13 07:40:39 (21516): Guest Log: Looking for outputfile HITS.46676269._022905.pool.root.1
2025-10-13 07:40:39 (21516): Guest Log: HITS file was successfully produced
2025-10-13 07:40:39 (21516): Guest Log: -rw-------. 1 atlas atlas 190332711 Oct 13 05:38 /home/atlas/RunAtlas/HITS.46676269._022905.pool.root.1
2025-10-13 07:40:41 (21516): Guest Log: Successfully finished the ATLAS job!
2025-10-13 07:40:41 (21516): Guest Log: Copying the results back to the shared directory!
2025-10-13 07:40:41 (21516): Guest Log:  *** Contents of shared directory: ***
2025-10-13 07:40:41 (21516): Guest Log: total 404060
2025-10-13 07:40:41 (21516): Guest Log: -rwxrwxrwx. 1 root root 219030404 Oct 12 22:36 ATLAS.root_0
2025-10-13 07:40:41 (21516): Guest Log: -rwxrwxrwx. 1 root root 190332711 Oct 13 05:40 HITS.pool.root.1
2025-10-13 07:40:41 (21516): Guest Log: -rwxrwxrwx. 1 root root     11338 Oct 12 22:36 init_data.xml
2025-10-13 07:40:41 (21516): Guest Log: -rwxrwxrwx. 1 root root    569672 Oct  9 22:08 input.tar.gz
2025-10-13 07:40:41 (21516): Guest Log: -rwxrwxrwx. 1 root root   3788800 Oct 13 05:40 result.tar.gz
2025-10-13 07:40:41 (21516): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 22:08 start_atlas.sh
2025-10-13 07:40:41 (21516): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 07:40:41 (21516): VM Completion File Detected.
2025-10-13 07:40:41 (21516): Powering off VM.
2025-10-13 07:40:44 (21516): Successfully stopped VM.
2025-10-13 07:40:44 (21516): Deregistering VM. (boinc_6ae01787961a1b46, slot#6)
2025-10-13 07:40:44 (21516): Removing network bandwidth throttle group from VM.
2025-10-13 07:40:45 (21516): Removing VM from VirtualBox.
2025-10-13 07:40:50 (21516): called boinc_finish(0)

</stderr_txt>
]]>

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