Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:03 (13569): wrapper (7.7.26015): starting
18:09:03 (13569): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 18:09:03] Arguments: --nthreads 8
[2025-10-09 18:09:03] Threads: 8
[2025-10-09 18:09:03] Checking for CVMFS
[2025-10-09 18:09:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 18:09:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 18:09:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 18:09:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 18:09:03] 2.11.2.0 3869 34854 125088 151525 2 56 17855281 18432001 1833 130560 0 32041741 99.994 1131594 38141 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 18:09:03] CVMFS is ok
[2025-10-09 18:09:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 18:09:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 18:09:03] Further information can be found at the LHC@home message board.
[2025-10-09 18:09:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 18:09:03] Checking for apptainer binary...
[2025-10-09 18:09:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 18:09:03] Running /usr/bin/apptainer --version
[2025-10-09 18:09:03] apptainer version 1.3.2-1.el7
[2025-10-09 18:09:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 18:09:04] c-206-12.aglt2.org
[2025-10-09 18:09:04] apptainer works
[2025-10-09 18:09:04] Set ATHENA_PROC_NUMBER=8
[2025-10-09 18:09:04] Set ATHENA_CORE_NUMBER=8
[2025-10-09 18:09:04] Starting ATLAS job with PandaID=6837346130
[2025-10-09 18:09:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 20:52:37]  *** The last 200 lines of the pilot log: ***
[2025-10-09 20:52:37] 2025-10-10 00:51:44,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 20:52:37] 2025-10-10 00:51:44,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 20:52:37] 2025-10-10 00:51:44,775 | INFO     | fitting pss+swap vs Time
[2025-10-09 20:52:37] 2025-10-10 00:51:44,776 | INFO     | sum of square deviations: 1270051720.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,776 | INFO     | sum of deviations: 12457595100.499996
[2025-10-09 20:52:37] 2025-10-10 00:51:44,776 | INFO     | mean x: 1760052627.5
[2025-10-09 20:52:37] 2025-10-10 00:51:44,776 | INFO     | mean y: 2460337.55625
[2025-10-09 20:52:37] 2025-10-10 00:51:44,777 | INFO     | -- intersect: -17261421631.72776
[2025-10-09 20:52:37] 2025-10-10 00:51:44,777 | INFO     | intersect: -17261421631.72776
[2025-10-09 20:52:37] 2025-10-10 00:51:44,777 | INFO     | chi2: 1.907885899616469
[2025-10-09 20:52:37] 2025-10-10 00:51:44,777 | INFO     | sum of square deviations: 1154663510.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,778 | INFO     | sum of deviations: 22257841955.000004
[2025-10-09 20:52:37] 2025-10-10 00:51:44,778 | INFO     | mean x: 1760052475.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,778 | INFO     | mean y: 2472934.709677419
[2025-10-09 20:52:37] 2025-10-10 00:51:44,778 | INFO     | -- intersect: -33925134096.93246
[2025-10-09 20:52:37] 2025-10-10 00:51:44,778 | INFO     | intersect: -33925134096.93246
[2025-10-09 20:52:37] 2025-10-10 00:51:44,779 | INFO     | chi2: 1.1281693718046797
[2025-10-09 20:52:37] 2025-10-10 00:51:44,779 | INFO     | current chi2=1.1281693718046797 (change=40.86809006600085 %)
[2025-10-09 20:52:37] 2025-10-10 00:51:44,779 | INFO     | sum of square deviations: 1046484737.5
[2025-10-09 20:52:37] 2025-10-10 00:51:44,780 | INFO     | sum of deviations: 21254564615.500004
[2025-10-09 20:52:37] 2025-10-10 00:51:44,780 | INFO     | mean x: 1760052322.5
[2025-10-09 20:52:37] 2025-10-10 00:51:44,780 | INFO     | mean y: 2471519.8733333335
[2025-10-09 20:52:37] 2025-10-10 00:51:44,780 | INFO     | -- intersect: -35744964132.75327
[2025-10-09 20:52:37] 2025-10-10 00:51:44,780 | INFO     | intersect: -35744964132.75327
[2025-10-09 20:52:37] 2025-10-10 00:51:44,780 | INFO     | chi2: 1.1289561304388434
[2025-10-09 20:52:37] 2025-10-10 00:51:44,780 | INFO     | current chi2=1.1289561304388434 (change=-0.06973763459870601 %)
[2025-10-09 20:52:37] 2025-10-10 00:51:44,781 | INFO     | right removable region: 149
[2025-10-09 20:52:37] 2025-10-10 00:51:44,781 | INFO     | sum of square deviations: 1154663510.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,781 | INFO     | sum of deviations: -4477554146.999999
[2025-10-09 20:52:37] 2025-10-10 00:51:44,782 | INFO     | mean x: 1760052780.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,782 | INFO     | mean y: 2482261.374193548
[2025-10-09 20:52:37] 2025-10-10 00:51:44,782 | INFO     | -- intersect: 6827614913.2477045
[2025-10-09 20:52:37] 2025-10-10 00:51:44,782 | INFO     | intersect: 6827614913.2477045
[2025-10-09 20:52:37] 2025-10-10 00:51:44,782 | INFO     | chi2: 0.8045520238688935
[2025-10-09 20:52:37] 2025-10-10 00:51:44,782 | INFO     | current chi2=0.8045520238688935 (change=57.830181352531206 %)
[2025-10-09 20:52:37] 2025-10-10 00:51:44,783 | INFO     | sum of square deviations: 1046484737.5
[2025-10-09 20:52:37] 2025-10-10 00:51:44,783 | INFO     | sum of deviations: -4668513000.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,783 | INFO     | mean x: 1760052932.5
[2025-10-09 20:52:37] 2025-10-10 00:51:44,783 | INFO     | mean y: 2482554.6666666665
[2025-10-09 20:52:37] 2025-10-10 00:51:44,784 | INFO     | -- intersect: 7854321861.653572
[2025-10-09 20:52:37] 2025-10-10 00:51:44,784 | INFO     | intersect: 7854321861.653572
[2025-10-09 20:52:37] 2025-10-10 00:51:44,784 | INFO     | chi2: 0.8015524025138597
[2025-10-09 20:52:37] 2025-10-10 00:51:44,784 | INFO     | current chi2=0.8015524025138597 (change=0.37283124845168975 %)
[2025-10-09 20:52:37] 2025-10-10 00:51:44,784 | INFO     | left removable region: 20
[2025-10-09 20:52:37] 2025-10-10 00:51:44,784 | INFO     | sum of square deviations: 665612480.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,785 | INFO     | sum of deviations: 3164337180.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,785 | INFO     | mean x: 1760052902.0
[2025-10-09 20:52:37] 2025-10-10 00:51:44,785 | INFO     | mean y: 2498507.96124031
[2025-10-09 20:52:37] 2025-10-10 00:51:44,785 | INFO     | -- intersect: -8364833842.185644
[2025-10-09 20:52:37] 2025-10-10 00:51:44,785 | INFO     | intersect: -8364833842.185644
[2025-10-09 20:52:37] 2025-10-10 00:51:44,786 | INFO     | chi2: 0.00045034817221512556
[2025-10-09 20:52:37] 2025-10-10 00:51:44,786 | INFO     | -- intersect: -8364833842.185644
[2025-10-09 20:52:37] 2025-10-10 00:51:44,786 | INFO     | current memory leak: 4.75 B/s (using 129 data points, chi2=0.00)
[2025-10-09 20:52:37] 2025-10-10 00:51:44,786 | INFO     | could have reported an average CPU frequency of 2490 MHz (9 samples)
[2025-10-09 20:52:37] 2025-10-10 00:51:44,786 | INFO     | ..............................
[2025-10-09 20:52:37] 2025-10-10 00:51:44,786 | INFO     | . Timing measurements:
[2025-10-09 20:52:37] 2025-10-10 00:51:44,787 | INFO     | . get job = 0 s
[2025-10-09 20:52:37] 2025-10-10 00:51:44,787 | INFO     | . initial setup = 2 s
[2025-10-09 20:52:37] 2025-10-10 00:51:44,787 | INFO     | . payload setup = 4 s
[2025-10-09 20:52:37] 2025-10-10 00:51:44,787 | INFO     | . stage-in = 0 s
[2025-10-09 20:52:37] 2025-10-10 00:51:44,787 | INFO     | . payload execution = 9718 s
[2025-10-09 20:52:37] 2025-10-10 00:51:44,787 | INFO     | . stage-out = 1 s
[2025-10-09 20:52:37] 2025-10-10 00:51:44,787 | INFO     | . log creation = 0 s
[2025-10-09 20:52:37] 2025-10-10 00:51:44,787 | INFO     | ..............................
[2025-10-09 20:52:37] 2025-10-10 00:51:45,114 | INFO     | 
[2025-10-09 20:52:37] 2025-10-10 00:51:45,114 | INFO     | job summary report
[2025-10-09 20:52:37] 2025-10-10 00:51:45,115 | INFO     | --------------------------------------------------
[2025-10-09 20:52:37] 2025-10-10 00:51:45,115 | INFO     | PanDA job id: 6837346130
[2025-10-09 20:52:37] 2025-10-10 00:51:45,115 | INFO     | task id: 46676269
[2025-10-09 20:52:37] 2025-10-10 00:51:45,115 | INFO     | errors: (none)
[2025-10-09 20:52:37] 2025-10-10 00:51:45,115 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 20:52:37] 2025-10-10 00:51:45,115 | INFO     | pilot state: finished 
[2025-10-09 20:52:37] 2025-10-10 00:51:45,116 | INFO     | transexitcode: 0
[2025-10-09 20:52:37] 2025-10-10 00:51:45,116 | INFO     | exeerrorcode: 0
[2025-10-09 20:52:37] 2025-10-10 00:51:45,116 | INFO     | exeerrordiag: 
[2025-10-09 20:52:37] 2025-10-10 00:51:45,116 | INFO     | exitcode: 0
[2025-10-09 20:52:37] 2025-10-10 00:51:45,116 | INFO     | exitmsg: OK
[2025-10-09 20:52:37] 2025-10-10 00:51:45,116 | INFO     | cpuconsumptiontime: 73601 s
[2025-10-09 20:52:37] 2025-10-10 00:51:45,117 | INFO     | nevents: 400
[2025-10-09 20:52:37] 2025-10-10 00:51:45,117 | INFO     | neventsw: 0
[2025-10-09 20:52:37] 2025-10-10 00:51:45,117 | INFO     | pid: 23673
[2025-10-09 20:52:37] 2025-10-10 00:51:45,117 | INFO     | pgrp: 23673
[2025-10-09 20:52:37] 2025-10-10 00:51:45,117 | INFO     | corecount: 8
[2025-10-09 20:52:37] 2025-10-10 00:51:45,117 | INFO     | event service: False
[2025-10-09 20:52:37] 2025-10-10 00:51:45,118 | INFO     | sizes: {0: 2348855, 3: 2349117, 11: 2349145, 9726: 2377722, 9728: 2386720, 9731: 2386776, 9735: 2387162}
[2025-10-09 20:52:37] 2025-10-10 00:51:45,118 | INFO     | --------------------------------------------------
[2025-10-09 20:52:37] 2025-10-10 00:51:45,118 | INFO     | 
[2025-10-09 20:52:37] 2025-10-10 00:51:45,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-09 20:52:37] 2025-10-10 00:51:45,157 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,157 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,160 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 20:52:37] 2025-10-10 00:51:45,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,160 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 20:52:37] 2025-10-10 00:51:45,161 | INFO     | job 6837346130 has completed (purged errors)
[2025-10-09 20:52:37] 2025-10-10 00:51:45,161 | INFO     | overall cleanup function is called
[2025-10-09 20:52:37] 2025-10-10 00:51:46,169 | INFO     | --- collectZombieJob: --- 10, [23673]
[2025-10-09 20:52:37] 2025-10-10 00:51:46,170 | INFO     | zombie collector waiting for pid 23673
[2025-10-09 20:52:37] 2025-10-10 00:51:46,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 20:52:37] 2025-10-10 00:51:46,170 | INFO     | collected zombie processes
[2025-10-09 20:52:37] 2025-10-10 00:51:46,170 | INFO     | will attempt to kill all subprocesses of pid=23673
[2025-10-09 20:52:37] 2025-10-10 00:51:46,329 | INFO     | process IDs to be killed: [23673] (in reverse order)
[2025-10-09 20:52:37] 2025-10-10 00:51:46,386 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 20:52:37] 2025-10-10 00:51:46,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 20:52:37] 2025-10-10 00:51:46,392 | INFO     | did not find any defunct processes belonging to 23673
[2025-10-09 20:52:37] 2025-10-10 00:51:46,396 | INFO     | did not find any defunct processes belonging to 23673
[2025-10-09 20:52:37] 2025-10-10 00:51:46,396 | INFO     | ready for new job
[2025-10-09 20:52:37] 2025-10-10 00:51:46,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 20:52:37] 2025-10-10 00:51:46,398 | INFO     | ***************************************
[2025-10-09 20:52:37] 2025-10-10 00:51:46,399 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 20:52:37] 2025-10-10 00:51:46,399 | INFO     | ***************************************
[2025-10-09 20:52:37] 2025-10-10 00:51:46,399 | INFO     | 
[2025-10-09 20:52:37] 2025-10-10 00:51:46,400 | INFO     | architecture information:
[2025-10-09 20:52:37] 2025-10-10 00:51:46,401 | INFO     | executing command: cat /etc/os-release
[2025-10-09 20:52:37] 2025-10-10 00:51:46,427 | INFO     | cat /etc/os-release:
[2025-10-09 20:52:37] NAME="CentOS Linux"
[2025-10-09 20:52:37] VERSION="7 (Core)"
[2025-10-09 20:52:37] ID="centos"
[2025-10-09 20:52:37] ID_LIKE="rhel fedora"
[2025-10-09 20:52:37] VERSION_ID="7"
[2025-10-09 20:52:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 20:52:37] ANSI_COLOR="0;31"
[2025-10-09 20:52:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 20:52:37] HOME_URL="https://www.centos.org/"
[2025-10-09 20:52:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 20:52:37] 
[2025-10-09 20:52:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 20:52:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 20:52:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 20:52:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 20:52:37] 
[2025-10-09 20:52:37] 2025-10-10 00:51:46,428 | INFO     | ***************************************
[2025-10-09 20:52:37] 2025-10-10 00:51:46,931 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-09 20:52:37] 2025-10-10 00:51:46,950 | INFO     | sufficient remaining disk space (28010610688 B)
[2025-10-09 20:52:37] 2025-10-10 00:51:46,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 20:52:37] 2025-10-10 00:51:46,951 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 20:52:37] 2025-10-10 00:51:46,951 | INFO     | update_server=False
[2025-10-09 20:52:37] 2025-10-10 00:51:46,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 20:52:37] 2025-10-10 00:51:46,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 20:52:37] 2025-10-10 00:51:47,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 20:52:37] 2025-10-10 00:51:47,458 | INFO     | all payload control threads have been joined
[2025-10-09 20:52:37] 2025-10-10 00:51:47,591 | INFO     | all data control threads have been joined
[2025-10-09 20:52:37] 2025-10-10 00:51:47,817 | INFO     | all job control threads have been joined
[2025-10-09 20:52:37] 2025-10-10 00:51:47,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 20:52:37] 2025-10-10 00:51:47,892 | INFO     | aborting loop
[2025-10-09 20:52:37] 2025-10-10 00:51:47,957 | INFO     | [job] retrieve thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,049 | INFO     | [data] copytool_in thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,195 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,323 | INFO     | [payload] validate_post thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,464 | INFO     | [payload] control thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,595 | INFO     | [data] control thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,692 | INFO     | [payload] failed_post thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,822 | INFO     | [job] control thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,897 | INFO     | [job] job monitor thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,962 | INFO     | [data] copytool_out thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:48,966 | INFO     | [job] validate thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:49,048 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:49,195 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:49,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 20:52:37] 2025-10-10 00:51:50,912 | INFO     | [job] queue monitor thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:51,103 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:51:57,099 | INFO     | job.realtimelogging is not enabled
[2025-10-09 20:52:37] 2025-10-10 00:51:58,105 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 20:52:37] 2025-10-10 00:52:17,516 | INFO     | PID=17267 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 20:52:37] 2025-10-10 00:52:17,516 | INFO     | .. there are 3 such processes running
[2025-10-09 20:52:37] 2025-10-10 00:52:17,516 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 20:52:37] 2025-10-10 00:52:17,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 20:52:37] 2025-10-10 00:52:17,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 20:52:37] 2025-10-10 00:52:30,072 | INFO     | [monitor] cgroup control has ended
[2025-10-09 20:52:37] 2025-10-10 00:52:31,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923215198016)>', '<ExcThread(monitor, started 139922618955520)>']
[2025-10-09 20:52:37] 2025-10-10 00:52:32,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 20:52:37] 2025-10-10 00:52:32,594 | INFO     | [monitor] control thread has ended
[2025-10-09 20:52:37] 2025-10-10 00:52:36,755 | INFO     | all workflow threads have been joined
[2025-10-09 20:52:37] 2025-10-10 00:52:36,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 20:52:37] 2025-10-10 00:52:36,756 | INFO     | traces error code: 0
[2025-10-09 20:52:37] 2025-10-10 00:52:36,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 20:52:37] 2025-10-10 00:52:36,875 [wrapper] ==== pilot stdout END ====
[2025-10-09 20:52:37] 2025-10-10 00:52:36,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 20:52:37] 2025-10-10 00:52:36,880 [wrapper] pilotpid: 17267
[2025-10-09 20:52:37] 2025-10-10 00:52:36,882 [wrapper] Pilot exit status: 0
[2025-10-09 20:52:37] 2025-10-10 00:52:36,891 [wrapper] pandaids: 6837346130
[2025-10-09 20:52:37] 2025-10-10 00:52:36,929 [wrapper] cleanup supervisor_pilot   727 17268
[2025-10-09 20:52:37] 2025-10-10 00:52:36,932 [wrapper] Test setup, not cleaning
[2025-10-09 20:52:37] 2025-10-10 00:52:36,935 [wrapper] apfmon messages muted
[2025-10-09 20:52:37] 2025-10-10 00:52:36,937 [wrapper] ==== wrapper stdout END ====
[2025-10-09 20:52:37] 2025-10-10 00:52:36,940 [wrapper] ==== wrapper stderr END ====
[2025-10-09 20:52:37]  *** Error codes and diagnostics ***
[2025-10-09 20:52:37]     "exeErrorCode": 0,
[2025-10-09 20:52:37]     "exeErrorDiag": "",
[2025-10-09 20:52:37]     "pilotErrorCode": 0,
[2025-10-09 20:52:37]     "pilotErrorDiag": "",
[2025-10-09 20:52:37]  *** Listing of results directory ***
[2025-10-09 20:52:37] total 408372
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 10:08 pilot3.tar.gz
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 10:29 queuedata.json
[2025-10-09 20:52:37] -rwx------ 1 boincer umatlas     36292 Oct  9 10:32 runpilot2-wrapper.sh
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas       100 Oct  9 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 20:52:37] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 18:09 run_atlas
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas       105 Oct  9 18:09 job.xml
[2025-10-09 20:52:37] -rw-r--r-- 2 boincer umatlas 220544023 Oct  9 18:09 EVNT.46676267._000838.pool.root.1
[2025-10-09 20:52:37] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 18:09 start_atlas.sh
[2025-10-09 20:52:37] drwxrwx--x 2 boincer umatlas      4096 Oct  9 18:09 shared
[2025-10-09 20:52:37] -rw-r--r-- 2 boincer umatlas    569683 Oct  9 18:09 input.tar.gz
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas         0 Oct  9 18:09 boinc_lockfile
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas      2549 Oct  9 18:09 pandaJob.out
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas    975454 Oct  9 18:09 agis_schedconf.cvmfs.json
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas   1560401 Oct  9 18:09 agis_ddmendpoints.agis.ALL.json
[2025-10-09 20:52:37] drwx------ 5 boincer umatlas      4096 Oct  9 18:09 pilot3
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas      5951 Oct  9 20:47 init_data.xml
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas 190184164 Oct  9 20:51 HITS.46676269._020166.pool.root.1
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas       530 Oct  9 20:51 boinc_task_state.xml
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas        95 Oct  9 20:51 pilot_heartbeat.json
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas      1053 Oct  9 20:51 memory_monitor_summary.json
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas    401169 Oct  9 20:51 log.46676269._020166.job.log.tgz.1
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas      7851 Oct  9 20:51 heartbeat.json
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 20:52 boinc_mmap_file
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas        27 Oct  9 20:52 wrapper_checkpoint.txt
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas      4893 Oct  9 20:52 pilotlog.txt
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas   1374536 Oct  9 20:52 log.46676269._020166.job.log.1
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas       357 Oct  9 20:52 output.list
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas       620 Oct  9 20:52 runtime_log
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas   1792000 Oct  9 20:52 result.tar.gz
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas       659 Oct  9 20:52 TfXMDmrr6Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVOaNDmSICIYm.diag
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas      8703 Oct  9 20:52 runtime_log.err
[2025-10-09 20:52:37] -rw-r--r-- 1 boincer umatlas     20850 Oct  9 20:52 stderr.txt
[2025-10-09 20:52:37] HITS file was successfully produced:
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas 190184164 Oct  9 20:51 shared/HITS.pool.root.1
[2025-10-09 20:52:37]  *** Contents of shared directory: ***
[2025-10-09 20:52:37] total 403436
[2025-10-09 20:52:37] -rw-r--r-- 2 boincer umatlas 220544023 Oct  9 18:09 ATLAS.root_0
[2025-10-09 20:52:37] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 18:09 start_atlas.sh
[2025-10-09 20:52:37] -rw-r--r-- 2 boincer umatlas    569683 Oct  9 18:09 input.tar.gz
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas 190184164 Oct  9 20:51 HITS.pool.root.1
[2025-10-09 20:52:37] -rw------- 1 boincer umatlas   1792000 Oct  9 20:52 result.tar.gz
20:52:38 (13569): run_atlas exited; CPU time 73799.719653
20:52:38 (13569): called boinc_finish(0)

</stderr_txt>
]]>

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