Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:12:59 (76661): wrapper (7.7.26015): starting
15:12:59 (76661): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 15:12:59] Arguments: --nthreads 12
[2025-10-09 15:12:59] Threads: 12
[2025-10-09 15:12:59] Checking for CVMFS
[2025-10-09 15:13:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 15:13:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 15:13:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 15:13:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 15:13:00] 2.11.5.0 2126 26184 217044 151524 1 302 43680911 45568000 16310 130560 0 244670018 99.833 130100444 28893 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 15:13:00] CVMFS is ok
[2025-10-09 15:13:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 15:13:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 15:13:00] Further information can be found at the LHC@home message board.
[2025-10-09 15:13:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 15:13:00] Checking for apptainer binary...
[2025-10-09 15:13:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 15:13:00] Running /usr/bin/apptainer --version
[2025-10-09 15:13:00] apptainer version 1.4.1-1.el9
[2025-10-09 15:13:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 15:13:01] wns0034.triumf.lcg
[2025-10-09 15:13:01] apptainer works
[2025-10-09 15:13:01] Set ATHENA_PROC_NUMBER=12
[2025-10-09 15:13:01] Set ATHENA_CORE_NUMBER=12
[2025-10-09 15:13:01] Starting ATLAS job with PandaID=6837359257
[2025-10-09 15:13:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 15:18:35]  *** The last 200 lines of the pilot log: ***
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | WARNING  | wrong length of table data, x=[1760048098.0], y=[1156.0] (must be same and length>=4)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | ..............................
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | . Timing measurements:
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | . get job = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . initial setup = 3 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . payload setup = 22 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . stage-in = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . payload execution = 46 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . stage-out = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . log creation = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | ..............................
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837359257/pilotlog.txt
[2025-10-09 15:18:35] 2025-10-09 22:17:43,287 | INFO     | time since job start (255s) is within the limit (172800.0s)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,304 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 15:18:35] - Log from pilotlog.txt -
[2025-10-09 15:18:35] 2025-10-09 22:17:43,211 | INFO     | extracted standard info from prmon json
[2025-10-09 15:18:35] 2025-10-09 22:17:43,211 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 15:18:35] 2025-10-09 22:17:43,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 15:18:35] 2025-10-09 22:17:43,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 15:18:35] 2025-10-09 22:17:43,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | WARNING  | wrong length of table data, x=[1760048098.0], y=[1156.0] (must be same and length>=4)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | ..............................
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | . Timing measurements:
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | . get job = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . initial setup = 3 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . payload setup = 22 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . stage-in = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . payload execution = 46 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . stage-out = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . log creation = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | ..............................
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837359257/pilotlog.txt
[2025-10-09 15:18:35] 2025-10-09 22:17:43,287 | INFO     | time since job start (255s) is within the limit (172800.0s)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,304 | WARNING  | 
[2025-10-09 15:18:35] [begin log extracts]
[2025-10-09 15:18:35] - Log from pilotlog.txt -
[2025-10-09 15:18:35] 2025-10-09 22:17:43,211 | INFO     | extracted standard info from prmon json
[2025-10-09 15:18:35] 2025-10-09 22:17:43,211 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 15:18:35] 2025-10-09 22:17:43,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 15:18:35] 2025-10-09 22:17:43,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 15:18:35] 2025-10-09 22:17:43,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | WARNING  | wrong length of table data, x=[1760048098.0], y=[1156.0] (must be same and length>=4)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | ..............................
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | . Timing measurements:
[2025-10-09 15:18:35] 2025-10-09 22:17:43,230 | INFO     | . get job = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . initial setup = 3 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . payload setup = 22 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . stage-in = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . payload execution = 46 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . stage-out = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | . log creation = 0 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | ..............................
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 15:18:35] 2025-10-09 22:17:43,231 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837359257/pilotlog.txt
[2025-10-09 15:18:35] 2025-10-09 22:17:43,287 | INFO     | time since job start (255s) is within the limit (172800.0s)
[2025-10-09 15:18:35] [end log extracts]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,304 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,305 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 15:18:35] 2025-10-09 22:17:43,784 | INFO     | 
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | job summary report
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | --------------------------------------------------
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | PanDA job id: 6837359257
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | task id: 46676269
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 15:15:17,275 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | pilot state: failed 
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | transexitcode: 65
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | exeerrorcode: 65
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | exitcode: 65
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | cpuconsumptiontime: 17 s
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | nevents: 0
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | neventsw: 0
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | pid: 87142
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | pgrp: 87142
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | corecount: 12
[2025-10-09 15:18:35] 2025-10-09 22:17:43,785 | INFO     | event service: False
[2025-10-09 15:18:35] 2025-10-09 22:17:43,786 | INFO     | sizes: {0: 2348852, 11: 2348852, 18: 2349142, 22: 2349170, 73: 2372509, 74: 2376801, 76: 2376957, 210: 2377151}
[2025-10-09 15:18:35] 2025-10-09 22:17:43,786 | INFO     | --------------------------------------------------
[2025-10-09 15:18:35] 2025-10-09 22:17:43,786 | INFO     | 
[2025-10-09 15:18:35] 2025-10-09 22:17:43,786 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 15:18:35] 2025-10-09 22:17:43,826 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,828 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 15:18:35] 2025-10-09 22:17:43,828 | INFO     | job 6837359257 has completed (purged errors)
[2025-10-09 15:18:35] 2025-10-09 22:17:43,828 | INFO     | overall cleanup function is called
[2025-10-09 15:18:35] 2025-10-09 22:17:44,834 | INFO     | --- collectZombieJob: --- 10, [87142]
[2025-10-09 15:18:35] 2025-10-09 22:17:44,835 | INFO     | zombie collector waiting for pid 87142
[2025-10-09 15:18:35] 2025-10-09 22:17:44,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 15:18:35] 2025-10-09 22:17:44,835 | INFO     | collected zombie processes
[2025-10-09 15:18:35] 2025-10-09 22:17:44,835 | INFO     | will attempt to kill all subprocesses of pid=87142
[2025-10-09 15:18:35] 2025-10-09 22:17:45,241 | INFO     | process IDs to be killed: [87142] (in reverse order)
[2025-10-09 15:18:35] 2025-10-09 22:17:45,319 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 15:18:35] 2025-10-09 22:17:45,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 15:18:35] 2025-10-09 22:17:45,329 | INFO     | did not find any defunct processes belonging to 87142
[2025-10-09 15:18:35] 2025-10-09 22:17:45,337 | INFO     | did not find any defunct processes belonging to 87142
[2025-10-09 15:18:35] 2025-10-09 22:17:45,338 | INFO     | ready for new job
[2025-10-09 15:18:35] 2025-10-09 22:17:45,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 15:18:35] 2025-10-09 22:17:45,339 | INFO     | ***************************************
[2025-10-09 15:18:35] 2025-10-09 22:17:45,339 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 15:18:35] 2025-10-09 22:17:45,339 | INFO     | ***************************************
[2025-10-09 15:18:35] 2025-10-09 22:17:45,339 | INFO     | 
[2025-10-09 15:18:35] 2025-10-09 22:17:45,341 | INFO     | architecture information:
[2025-10-09 15:18:35] 2025-10-09 22:17:45,341 | INFO     | executing command: cat /etc/os-release
[2025-10-09 15:18:35] 2025-10-09 22:17:45,353 | INFO     | cat /etc/os-release:
[2025-10-09 15:18:35] NAME="CentOS Linux"
[2025-10-09 15:18:35] VERSION="7 (Core)"
[2025-10-09 15:18:35] ID="centos"
[2025-10-09 15:18:35] ID_LIKE="rhel fedora"
[2025-10-09 15:18:35] VERSION_ID="7"
[2025-10-09 15:18:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 15:18:35] ANSI_COLOR="0;31"
[2025-10-09 15:18:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 15:18:35] HOME_URL="https://www.centos.org/"
[2025-10-09 15:18:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 15:18:35] 
[2025-10-09 15:18:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 15:18:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 15:18:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 15:18:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 15:18:35] 
[2025-10-09 15:18:35] 2025-10-09 22:17:45,354 | INFO     | ***************************************
[2025-10-09 15:18:35] 2025-10-09 22:17:45,857 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 15:18:35] 2025-10-09 22:17:45,901 | INFO     | sufficient remaining disk space (1618021974016 B)
[2025-10-09 15:18:35] 2025-10-09 22:17:45,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 15:18:35] 2025-10-09 22:17:45,902 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 15:18:35] 2025-10-09 22:17:45,902 | INFO     | update_server=False
[2025-10-09 15:18:35] 2025-10-09 22:17:45,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 15:18:35] 2025-10-09 22:17:45,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 15:18:35] 2025-10-09 22:17:45,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 15:18:35] 2025-10-09 22:17:46,313 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 15:18:35] 2025-10-09 22:17:46,313 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 15:18:35] 2025-10-09 22:17:46,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 15:18:35] 2025-10-09 22:17:46,313 | INFO     | will abort loop
[2025-10-09 15:18:35] 2025-10-09 22:17:46,469 | INFO     | all job control threads have been joined
[2025-10-09 15:18:35] 2025-10-09 22:17:46,529 | INFO     | all data control threads have been joined
[2025-10-09 15:18:35] 2025-10-09 22:17:46,908 | INFO     | [job] retrieve thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:46,995 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:47,074 | INFO     | [payload] failed_post thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:47,169 | INFO     | [payload] validate_post thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:47,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:47,282 | INFO     | all payload control threads have been joined
[2025-10-09 15:18:35] 2025-10-09 22:17:47,319 | INFO     | [job] job monitor thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:47,474 | INFO     | [job] control thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:47,535 | INFO     | [data] control thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:47,899 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:47,908 | INFO     | [data] copytool_out thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:48,096 | INFO     | [data] copytool_in thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:48,234 | INFO     | [job] validate thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:48,248 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:48,288 | INFO     | [payload] control thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:48,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 15:18:35] 2025-10-09 22:17:49,468 | INFO     | [job] queue monitor thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:17:49,933 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 15:18:35] 2025-10-09 22:18:16,700 | INFO     | PID=80368 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 15:18:35] 2025-10-09 22:18:16,701 | INFO     | .. there are 35 such processes running
[2025-10-09 15:18:35] 2025-10-09 22:18:16,701 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 15:18:35] 2025-10-09 22:18:16,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 15:18:35] 2025-10-09 22:18:16,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 15:18:35] 2025-10-09 22:18:28,776 | INFO     | [monitor] cgroup control has ended
[2025-10-09 15:18:35] 2025-10-09 22:18:29,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256288831296)>', '<ExcThread(monitor, started 140255755749120)>']
[2025-10-09 15:18:35] 2025-10-09 22:18:29,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 15:18:35] 2025-10-09 22:18:29,802 | INFO     | [monitor] control thread has ended
[2025-10-09 15:18:35] 2025-10-09 22:18:34,816 | INFO     | all workflow threads have been joined
[2025-10-09 15:18:35] 2025-10-09 22:18:34,817 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 15:18:35] 2025-10-09 22:18:34,817 | INFO     | traces error code: 0
[2025-10-09 15:18:35] 2025-10-09 22:18:34,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 15:18:35] 2025-10-09 22:18:35,002 [wrapper] ==== pilot stdout END ====
[2025-10-09 15:18:35] 2025-10-09 22:18:35,015 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 15:18:35] 2025-10-09 22:18:35,027 [wrapper] pilotpid: 80368
[2025-10-09 15:18:35] 2025-10-09 22:18:35,036 [wrapper] Pilot exit status: 0
[2025-10-09 15:18:35] 2025-10-09 22:18:35,100 [wrapper] pandaids: 6837359257
[2025-10-09 15:18:35] 2025-10-09 22:18:35,307 [wrapper] cleanup supervisor_pilot   80374 80369
[2025-10-09 15:18:35] 2025-10-09 22:18:35,332 [wrapper] Test setup, not cleaning
[2025-10-09 15:18:35] 2025-10-09 22:18:35,354 [wrapper] apfmon messages muted
[2025-10-09 15:18:35] 2025-10-09 22:18:35,364 [wrapper] ==== wrapper stdout END ====
[2025-10-09 15:18:35] 2025-10-09 22:18:35,367 [wrapper] ==== wrapper stderr END ====
[2025-10-09 15:18:35]  *** Error codes and diagnostics ***
[2025-10-09 15:18:35]     "exeErrorCode": 65,
[2025-10-09 15:18:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 15:18:35]     "pilotErrorCode": 1305,
[2025-10-09 15:18:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 15:18:35]  *** Listing of results directory ***
[2025-10-09 15:18:35] total 223004
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc    557409 Oct  9 12:01 pilot3.tar.gz
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc      5112 Oct  9 12:18 queuedata.json
[2025-10-09 15:18:35] -rwx------. 1 boinc boinc     36292 Oct  9 12:18 runpilot2-wrapper.sh
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc       100 Oct  9 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 15:18:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 15:12 run_atlas
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc       105 Oct  9 15:12 job.xml
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc      6594 Oct  9 15:12 init_data.xml
[2025-10-09 15:18:35] -rw-r--r--. 2 boinc boinc 224225076 Oct  9 15:12 EVNT.46676267._001030.pool.root.1
[2025-10-09 15:18:35] -rw-r--r--. 2 boinc boinc     15120 Oct  9 15:12 start_atlas.sh
[2025-10-09 15:18:35] drwxrwx--x. 2 boinc boinc      4096 Oct  9 15:12 shared
[2025-10-09 15:18:35] -rw-r--r--. 2 boinc boinc    569678 Oct  9 15:12 input.tar.gz
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc         0 Oct  9 15:12 boinc_lockfile
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc      2549 Oct  9 15:13 pandaJob.out
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc    975454 Oct  9 15:13 agis_schedconf.cvmfs.json
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc   1560401 Oct  9 15:13 agis_ddmendpoints.agis.ALL.json
[2025-10-09 15:18:35] drwx------. 5 boinc boinc      4096 Oct  9 15:13 pilot3
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc       953 Oct  9 15:15 memory_monitor_summary.json
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc     22170 Oct  9 15:15 log.46676269._024916.job.log.tgz.1
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc        95 Oct  9 15:17 pilot_heartbeat.json
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc      8393 Oct  9 15:17 heartbeat.json
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc       523 Oct  9 15:18 boinc_task_state.xml
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc        22 Oct  9 15:18 wrapper_checkpoint.txt
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc      8192 Oct  9 15:18 boinc_mmap_file
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc      5007 Oct  9 15:18 pilotlog.txt
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc     93487 Oct  9 15:18 log.46676269._024916.job.log.1
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc       188 Oct  9 15:18 output.list
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc       620 Oct  9 15:18 runtime_log
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc    133120 Oct  9 15:18 result.tar.gz
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc      8528 Oct  9 15:18 runtime_log.err
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc       645 Oct  9 15:18 gTbLDmzKBR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZ9aNDmiZIetm.diag
[2025-10-09 15:18:35] -rw-r--r--. 1 boinc boinc     21735 Oct  9 15:18 stderr.txt
[2025-10-09 15:18:35] No HITS result produced
[2025-10-09 15:18:35]  *** Contents of shared directory: ***
[2025-10-09 15:18:35] total 219684
[2025-10-09 15:18:35] -rw-r--r--. 2 boinc boinc 224225076 Oct  9 15:12 ATLAS.root_0
[2025-10-09 15:18:35] -rw-r--r--. 2 boinc boinc     15120 Oct  9 15:12 start_atlas.sh
[2025-10-09 15:18:35] -rw-r--r--. 2 boinc boinc    569678 Oct  9 15:12 input.tar.gz
[2025-10-09 15:18:35] -rw-------. 1 boinc boinc    133120 Oct  9 15:18 result.tar.gz
15:18:37 (76661): run_atlas exited; CPU time 27.868221
15:18:37 (76661): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN