Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:51:03 (12669): wrapper (7.7.26015): starting
17:51:03 (12669): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 17:51:03] Arguments: --nthreads 8
[2025-10-09 17:51:03] Threads: 8
[2025-10-09 17:51:03] Checking for CVMFS
[2025-10-09 17:51:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 17:51:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 17:51:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 17:51:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 17:51:04] 2.11.2.0 27562 265510 270376 151524 2 57 15037790 18432000 2231 130560 7 619518824 99.255 1123099235 26116 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-09 17:51:04] CVMFS is ok
[2025-10-09 17:51:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 17:51:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 17:51:04] Further information can be found at the LHC@home message board.
[2025-10-09 17:51:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 17:51:04] Checking for apptainer binary...
[2025-10-09 17:51:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 17:51:04] Running /usr/bin/apptainer --version
[2025-10-09 17:51:04] apptainer version 1.3.2-1.el7
[2025-10-09 17:51:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 17:51:04] c-9-30.aglt2.org
[2025-10-09 17:51:04] apptainer works
[2025-10-09 17:51:04] Set ATHENA_PROC_NUMBER=8
[2025-10-09 17:51:04] Set ATHENA_CORE_NUMBER=8
[2025-10-09 17:51:04] Starting ATLAS job with PandaID=6837345687
[2025-10-09 17:51:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 20:36:37]  *** The last 200 lines of the pilot log: ***
[2025-10-09 20:36:37] 2025-10-10 00:35:41,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 20:36:37] 2025-10-10 00:35:41,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 20:36:37] 2025-10-10 00:35:41,229 | INFO     | fitting pss+swap vs Time
[2025-10-09 20:36:37] 2025-10-10 00:35:41,230 | INFO     | sum of square deviations: 1318277740.5
[2025-10-09 20:36:37] 2025-10-10 00:35:41,231 | INFO     | sum of deviations: 8712677915.500008
[2025-10-09 20:36:37] 2025-10-10 00:35:41,231 | INFO     | mean x: 1760051609.5
[2025-10-09 20:36:37] 2025-10-10 00:35:41,231 | INFO     | mean y: 2446741.783950617
[2025-10-09 20:36:37] 2025-10-10 00:35:41,231 | INFO     | -- intersect: -11629975104.628084
[2025-10-09 20:36:37] 2025-10-10 00:35:41,232 | INFO     | intersect: -11629975104.628084
[2025-10-09 20:36:37] 2025-10-10 00:35:41,232 | INFO     | chi2: 1.9950637823605741
[2025-10-09 20:36:37] 2025-10-10 00:35:41,232 | INFO     | sum of square deviations: 1199940638.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,233 | INFO     | sum of deviations: 18840971851.000004
[2025-10-09 20:36:37] 2025-10-10 00:35:41,234 | INFO     | mean x: 1760051457.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,234 | INFO     | mean y: 2459451.8089171974
[2025-10-09 20:36:37] 2025-10-10 00:35:41,234 | INFO     | -- intersect: -27633140933.323254
[2025-10-09 20:36:37] 2025-10-10 00:35:41,234 | INFO     | intersect: -27633140933.323254
[2025-10-09 20:36:37] 2025-10-10 00:35:41,234 | INFO     | chi2: 1.2189039657487277
[2025-10-09 20:36:37] 2025-10-10 00:35:41,235 | INFO     | current chi2=1.2189039657487277 (change=38.90401016119336 %)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,235 | INFO     | sum of square deviations: 1088905998.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,236 | INFO     | sum of deviations: 18154162115.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,236 | INFO     | mean x: 1760051304.5
[2025-10-09 20:36:37] 2025-10-10 00:35:41,236 | INFO     | mean y: 2458508.197368421
[2025-10-09 20:36:37] 2025-10-10 00:35:41,237 | INFO     | -- intersect: -29340989660.236935
[2025-10-09 20:36:37] 2025-10-10 00:35:41,237 | INFO     | intersect: -29340989660.236935
[2025-10-09 20:36:37] 2025-10-10 00:35:41,237 | INFO     | chi2: 1.2199387286330254
[2025-10-09 20:36:37] 2025-10-10 00:35:41,237 | INFO     | current chi2=1.2199387286330254 (change=-0.08489289668215136 %)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,237 | INFO     | right removable region: 151
[2025-10-09 20:36:37] 2025-10-10 00:35:41,238 | INFO     | sum of square deviations: 1199940638.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,239 | INFO     | sum of deviations: -10873001424.999998
[2025-10-09 20:36:37] 2025-10-10 00:35:41,239 | INFO     | mean x: 1760051762.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,239 | INFO     | mean y: 2471537.178343949
[2025-10-09 20:36:37] 2025-10-10 00:35:41,240 | INFO     | -- intersect: 15950798237.902817
[2025-10-09 20:36:37] 2025-10-10 00:35:41,240 | INFO     | intersect: 15950798237.902817
[2025-10-09 20:36:37] 2025-10-10 00:35:41,240 | INFO     | chi2: 0.8074174700660582
[2025-10-09 20:36:37] 2025-10-10 00:35:41,240 | INFO     | current chi2=0.8074174700660582 (change=59.52924025763649 %)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,241 | INFO     | sum of square deviations: 1088905998.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,242 | INFO     | sum of deviations: -8682144884.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,242 | INFO     | mean x: 1760051914.5
[2025-10-09 20:36:37] 2025-10-10 00:35:41,242 | INFO     | mean y: 2468528.447368421
[2025-10-09 20:36:37] 2025-10-10 00:35:41,242 | INFO     | -- intersect: 14035843083.383543
[2025-10-09 20:36:37] 2025-10-10 00:35:41,242 | INFO     | intersect: 14035843083.383543
[2025-10-09 20:36:37] 2025-10-10 00:35:41,243 | INFO     | chi2: 0.8029513207549358
[2025-10-09 20:36:37] 2025-10-10 00:35:41,243 | INFO     | current chi2=0.8029513207549358 (change=0.5531400392856302 %)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,243 | INFO     | left removable region: 20
[2025-10-09 20:36:37] 2025-10-10 00:35:41,243 | INFO     | sum of square deviations: 697054930.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,244 | INFO     | sum of deviations: 1854675903.0000002
[2025-10-09 20:36:37] 2025-10-10 00:35:41,244 | INFO     | mean x: 1760051884.0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,245 | INFO     | mean y: 2481573.4045801526
[2025-10-09 20:36:37] 2025-10-10 00:35:41,245 | INFO     | -- intersect: -4680543647.125101
[2025-10-09 20:36:37] 2025-10-10 00:35:41,245 | INFO     | intersect: -4680543647.125101
[2025-10-09 20:36:37] 2025-10-10 00:35:41,245 | INFO     | chi2: 7.963258752323383e-05
[2025-10-09 20:36:37] 2025-10-10 00:35:41,246 | INFO     | -- intersect: -4680543647.125101
[2025-10-09 20:36:37] 2025-10-10 00:35:41,246 | INFO     | current memory leak: 2.66 B/s (using 131 data points, chi2=0.00)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,246 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,246 | INFO     | ..............................
[2025-10-09 20:36:37] 2025-10-10 00:35:41,247 | INFO     | . Timing measurements:
[2025-10-09 20:36:37] 2025-10-10 00:35:41,247 | INFO     | . get job = 0 s
[2025-10-09 20:36:37] 2025-10-10 00:35:41,247 | INFO     | . initial setup = 2 s
[2025-10-09 20:36:37] 2025-10-10 00:35:41,247 | INFO     | . payload setup = 4 s
[2025-10-09 20:36:37] 2025-10-10 00:35:41,247 | INFO     | . stage-in = 0 s
[2025-10-09 20:36:37] 2025-10-10 00:35:41,247 | INFO     | . payload execution = 9836 s
[2025-10-09 20:36:37] 2025-10-10 00:35:41,248 | INFO     | . stage-out = 0 s
[2025-10-09 20:36:37] 2025-10-10 00:35:41,248 | INFO     | . log creation = 0 s
[2025-10-09 20:36:37] 2025-10-10 00:35:41,248 | INFO     | ..............................
[2025-10-09 20:36:37] 2025-10-10 00:35:41,354 | INFO     | 
[2025-10-09 20:36:37] 2025-10-10 00:35:41,355 | INFO     | job summary report
[2025-10-09 20:36:37] 2025-10-10 00:35:41,355 | INFO     | --------------------------------------------------
[2025-10-09 20:36:37] 2025-10-10 00:35:41,355 | INFO     | PanDA job id: 6837345687
[2025-10-09 20:36:37] 2025-10-10 00:35:41,355 | INFO     | task id: 46676269
[2025-10-09 20:36:37] 2025-10-10 00:35:41,355 | INFO     | errors: (none)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,355 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 20:36:37] 2025-10-10 00:35:41,356 | INFO     | pilot state: finished 
[2025-10-09 20:36:37] 2025-10-10 00:35:41,356 | INFO     | transexitcode: 0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,356 | INFO     | exeerrorcode: 0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,356 | INFO     | exeerrordiag: 
[2025-10-09 20:36:37] 2025-10-10 00:35:41,356 | INFO     | exitcode: 0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,356 | INFO     | exitmsg: OK
[2025-10-09 20:36:37] 2025-10-10 00:35:41,356 | INFO     | cpuconsumptiontime: 75072 s
[2025-10-09 20:36:37] 2025-10-10 00:35:41,357 | INFO     | nevents: 400
[2025-10-09 20:36:37] 2025-10-10 00:35:41,357 | INFO     | neventsw: 0
[2025-10-09 20:36:37] 2025-10-10 00:35:41,357 | INFO     | pid: 25644
[2025-10-09 20:36:37] 2025-10-10 00:35:41,357 | INFO     | pgrp: 25644
[2025-10-09 20:36:37] 2025-10-10 00:35:41,357 | INFO     | corecount: 8
[2025-10-09 20:36:37] 2025-10-10 00:35:41,357 | INFO     | event service: False
[2025-10-09 20:36:37] 2025-10-10 00:35:41,358 | INFO     | sizes: {0: 2348633, 1: 2348832, 4: 2349094, 11: 2349122, 9844: 2377768, 9845: 2386766, 9847: 2386950, 9851: 2387208}
[2025-10-09 20:36:37] 2025-10-10 00:35:41,358 | INFO     | --------------------------------------------------
[2025-10-09 20:36:37] 2025-10-10 00:35:41,358 | INFO     | 
[2025-10-09 20:36:37] 2025-10-10 00:35:41,358 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-09 20:36:37] 2025-10-10 00:35:41,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,376 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,376 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,376 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 20:36:37] 2025-10-10 00:35:41,379 | INFO     | job 6837345687 has completed (purged errors)
[2025-10-09 20:36:37] 2025-10-10 00:35:41,380 | INFO     | overall cleanup function is called
[2025-10-09 20:36:37] 2025-10-10 00:35:42,388 | INFO     | --- collectZombieJob: --- 10, [25644]
[2025-10-09 20:36:37] 2025-10-10 00:35:42,388 | INFO     | zombie collector waiting for pid 25644
[2025-10-09 20:36:37] 2025-10-10 00:35:42,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 20:36:37] 2025-10-10 00:35:42,388 | INFO     | collected zombie processes
[2025-10-09 20:36:37] 2025-10-10 00:35:42,389 | INFO     | will attempt to kill all subprocesses of pid=25644
[2025-10-09 20:36:37] 2025-10-10 00:35:42,676 | INFO     | process IDs to be killed: [25644] (in reverse order)
[2025-10-09 20:36:37] 2025-10-10 00:35:42,745 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 20:36:37] 2025-10-10 00:35:42,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 20:36:37] 2025-10-10 00:35:42,756 | INFO     | did not find any defunct processes belonging to 25644
[2025-10-09 20:36:37] 2025-10-10 00:35:42,771 | INFO     | did not find any defunct processes belonging to 25644
[2025-10-09 20:36:37] 2025-10-10 00:35:42,771 | INFO     | ready for new job
[2025-10-09 20:36:37] 2025-10-10 00:35:42,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 20:36:37] 2025-10-10 00:35:42,777 | INFO     | ***************************************
[2025-10-09 20:36:37] 2025-10-10 00:35:42,778 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 20:36:37] 2025-10-10 00:35:42,778 | INFO     | ***************************************
[2025-10-09 20:36:37] 2025-10-10 00:35:42,778 | INFO     | 
[2025-10-09 20:36:37] 2025-10-10 00:35:42,780 | INFO     | architecture information:
[2025-10-09 20:36:37] 2025-10-10 00:35:42,780 | INFO     | executing command: cat /etc/os-release
[2025-10-09 20:36:37] 2025-10-10 00:35:42,796 | INFO     | cat /etc/os-release:
[2025-10-09 20:36:37] NAME="CentOS Linux"
[2025-10-09 20:36:37] VERSION="7 (Core)"
[2025-10-09 20:36:37] ID="centos"
[2025-10-09 20:36:37] ID_LIKE="rhel fedora"
[2025-10-09 20:36:37] VERSION_ID="7"
[2025-10-09 20:36:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 20:36:37] ANSI_COLOR="0;31"
[2025-10-09 20:36:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 20:36:37] HOME_URL="https://www.centos.org/"
[2025-10-09 20:36:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 20:36:37] 
[2025-10-09 20:36:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 20:36:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 20:36:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 20:36:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 20:36:37] 
[2025-10-09 20:36:37] 2025-10-10 00:35:42,796 | INFO     | ***************************************
[2025-10-09 20:36:37] 2025-10-10 00:35:43,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-09 20:36:37] 2025-10-10 00:35:43,316 | INFO     | sufficient remaining disk space (104672002048 B)
[2025-10-09 20:36:37] 2025-10-10 00:35:43,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 20:36:37] 2025-10-10 00:35:43,317 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 20:36:37] 2025-10-10 00:35:43,317 | INFO     | update_server=False
[2025-10-09 20:36:37] 2025-10-10 00:35:43,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 20:36:37] 2025-10-10 00:35:43,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 20:36:37] 2025-10-10 00:35:43,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 20:36:37] 2025-10-10 00:35:43,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 20:36:37] 2025-10-10 00:35:43,351 | INFO     | aborting loop
[2025-10-09 20:36:37] 2025-10-10 00:35:43,421 | INFO     | all data control threads have been joined
[2025-10-09 20:36:37] 2025-10-10 00:35:43,522 | INFO     | all payload control threads have been joined
[2025-10-09 20:36:37] 2025-10-10 00:35:43,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 20:36:37] 2025-10-10 00:35:43,924 | INFO     | all job control threads have been joined
[2025-10-09 20:36:37] 2025-10-10 00:35:44,322 | INFO     | [job] retrieve thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:44,327 | INFO     | [job] queue monitor thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:44,338 | INFO     | [data] copytool_in thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:44,356 | INFO     | [job] job monitor thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:44,364 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:44,428 | INFO     | [data] control thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:44,528 | INFO     | [payload] control thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:44,530 | INFO     | [payload] failed_post thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:44,930 | INFO     | [job] control thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:45,121 | INFO     | [payload] validate_post thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:45,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:45,547 | INFO     | [job] validate thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:45,564 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:45,642 | INFO     | [data] copytool_out thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:45,777 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:35:47,319 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 20:36:37] 2025-10-10 00:36:13,028 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-09 20:36:37] 2025-10-10 00:36:13,649 | INFO     | PID=16592 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 20:36:37] 2025-10-10 00:36:13,649 | INFO     | .. there are 4 such processes running
[2025-10-09 20:36:37] 2025-10-10 00:36:13,650 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 20:36:37] 2025-10-10 00:36:13,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 20:36:37] 2025-10-10 00:36:13,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 20:36:37] 2025-10-10 00:36:31,289 | INFO     | [monitor] cgroup control has ended
[2025-10-09 20:36:37] 2025-10-10 00:36:31,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140409988253504)>', '<ExcThread(monitor, started 140409175004928)>']
[2025-10-09 20:36:37] 2025-10-10 00:36:32,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 20:36:37] 2025-10-10 00:36:32,751 | INFO     | [monitor] control thread has ended
[2025-10-09 20:36:37] 2025-10-10 00:36:36,940 | INFO     | all workflow threads have been joined
[2025-10-09 20:36:37] 2025-10-10 00:36:36,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 20:36:37] 2025-10-10 00:36:36,941 | INFO     | traces error code: 0
[2025-10-09 20:36:37] 2025-10-10 00:36:36,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 20:36:37] 2025-10-10 00:36:37,052 [wrapper] ==== pilot stdout END ====
[2025-10-09 20:36:37] 2025-10-10 00:36:37,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 20:36:37] 2025-10-10 00:36:37,056 [wrapper] pilotpid: 16592
[2025-10-09 20:36:37] 2025-10-10 00:36:37,058 [wrapper] Pilot exit status: 0
[2025-10-09 20:36:37] 2025-10-10 00:36:37,071 [wrapper] pandaids: 6837345687
[2025-10-09 20:36:37] 2025-10-10 00:36:37,117 [wrapper] cleanup supervisor_pilot 22934 16593
[2025-10-09 20:36:37] 2025-10-10 00:36:37,120 [wrapper] Test setup, not cleaning
[2025-10-09 20:36:37] 2025-10-10 00:36:37,123 [wrapper] apfmon messages muted
[2025-10-09 20:36:37] 2025-10-10 00:36:37,126 [wrapper] ==== wrapper stdout END ====
[2025-10-09 20:36:37] 2025-10-10 00:36:37,130 [wrapper] ==== wrapper stderr END ====
[2025-10-09 20:36:37]  *** Error codes and diagnostics ***
[2025-10-09 20:36:37]     "exeErrorCode": 0,
[2025-10-09 20:36:37]     "exeErrorDiag": "",
[2025-10-09 20:36:37]     "pilotErrorCode": 0,
[2025-10-09 20:36:37]     "pilotErrorDiag": "",
[2025-10-09 20:36:37]  *** Listing of results directory ***
[2025-10-09 20:36:37] total 414184
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 10:08 pilot3.tar.gz
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 10:11 queuedata.json
[2025-10-09 20:36:37] -rwx------ 1 boincer umatlas     36292 Oct  9 10:12 runpilot2-wrapper.sh
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas       100 Oct  9 17:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 20:36:37] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 17:51 run_atlas
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas       105 Oct  9 17:51 job.xml
[2025-10-09 20:36:37] -rw-r--r-- 2 boincer umatlas 222543672 Oct  9 17:51 EVNT.46676267._000822.pool.root.1
[2025-10-09 20:36:37] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 17:51 start_atlas.sh
[2025-10-09 20:36:37] drwxrwx--x 2 boincer umatlas      4096 Oct  9 17:51 shared
[2025-10-09 20:36:37] -rw-r--r-- 2 boincer umatlas    569677 Oct  9 17:51 input.tar.gz
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas         0 Oct  9 17:51 boinc_lockfile
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas      2548 Oct  9 17:51 pandaJob.out
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas    975454 Oct  9 17:51 agis_schedconf.cvmfs.json
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas   1560401 Oct  9 17:51 agis_ddmendpoints.agis.ALL.json
[2025-10-09 20:36:37] drwx------ 5 boincer umatlas      4096 Oct  9 17:51 pilot3
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas      6034 Oct  9 20:31 init_data.xml
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas       530 Oct  9 20:34 boinc_task_state.xml
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas 194158342 Oct  9 20:35 HITS.46676269._019761.pool.root.1
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas      1062 Oct  9 20:35 memory_monitor_summary.json
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas    396584 Oct  9 20:35 log.46676269._019761.job.log.tgz.1
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas      7829 Oct  9 20:35 heartbeat.json
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas        95 Oct  9 20:36 pilot_heartbeat.json
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 20:36 boinc_mmap_file
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas        27 Oct  9 20:36 wrapper_checkpoint.txt
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas      4822 Oct  9 20:36 pilotlog.txt
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas   1370453 Oct  9 20:36 log.46676269._019761.job.log.1
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas       357 Oct  9 20:36 output.list
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas       620 Oct  9 20:36 runtime_log
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas   1781760 Oct  9 20:36 result.tar.gz
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas       657 Oct  9 20:36 smTNDmgY6Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbJaNDmo7aMxm.diag
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas      8693 Oct  9 20:36 runtime_log.err
[2025-10-09 20:36:37] -rw-r--r-- 1 boincer umatlas     20886 Oct  9 20:36 stderr.txt
[2025-10-09 20:36:37] HITS file was successfully produced:
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas 194158342 Oct  9 20:35 shared/HITS.pool.root.1
[2025-10-09 20:36:37]  *** Contents of shared directory: ***
[2025-10-09 20:36:37] total 409256
[2025-10-09 20:36:37] -rw-r--r-- 2 boincer umatlas 222543672 Oct  9 17:51 ATLAS.root_0
[2025-10-09 20:36:37] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 17:51 start_atlas.sh
[2025-10-09 20:36:37] -rw-r--r-- 2 boincer umatlas    569677 Oct  9 17:51 input.tar.gz
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas 194158342 Oct  9 20:35 HITS.pool.root.1
[2025-10-09 20:36:37] -rw------- 1 boincer umatlas   1781760 Oct  9 20:36 result.tar.gz
20:36:38 (12669): run_atlas exited; CPU time 75368.649659
20:36:38 (12669): called boinc_finish(0)

</stderr_txt>
]]>

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