Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 09:54:15 (85767): vboxwrapper version 26210
2025-10-10 09:54:15 (85767): BOINC client version: 8.2.4
2025-10-10 09:54:15 (85767): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-10-10 09:54:15 (85767): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 09:54:15 (85767): Create VM. (boinc_ed8cba789474ca91, slot#0)
2025-10-10 09:54:15 (85767): Setting Memory Size for VM. (4300MB)
2025-10-10 09:54:15 (85767): Setting CPU Count for VM. (3)
2025-10-10 09:54:15 (85767): Setting Chipset Options for VM.
2025-10-10 09:54:16 (85767): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 09:54:16 (85767): Setting Boot Options for VM.
2025-10-10 09:54:16 (85767): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 09:54:16 (85767): Enabling VM Network Access.
2025-10-10 09:54:16 (85767): Disabling USB Support for VM.
2025-10-10 09:54:16 (85767): Disabling COM Port Support for VM.
2025-10-10 09:54:16 (85767): Disabling LPT Port Support for VM.
2025-10-10 09:54:16 (85767): Disabling Audio Support for VM.
2025-10-10 09:54:17 (85767): Disabling Clipboard Support for VM.
2025-10-10 09:54:17 (85767): Disabling Drag and Drop Support for VM.
2025-10-10 09:54:17 (85767): Adding storage controller(s) to VM.
2025-10-10 09:54:17 (85767): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 09:54:18 (85767): Adding VirtualBox Guest Additions to VM.
2025-10-10 09:54:18 (85767): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 09:54:18 (85767): forwarding host port 42303 to guest port 80
2025-10-10 09:54:18 (85767): Enabling remote desktop for VM.
2025-10-10 09:54:18 (85767): Required extension pack not installed, remote desktop not enabled.
2025-10-10 09:54:18 (85767): Enabling shared directory for VM.
2025-10-10 09:54:18 (85767): Starting VM using VBoxManage interface. (boinc_ed8cba789474ca91, slot#0)
2025-10-10 09:54:20 (85767): Successfully started VM. (PID = '86366')
2025-10-10 09:54:20 (85767): Reporting VM Process ID to BOINC.
2025-10-10 09:54:20 (85767): Guest Log: BIOS: VirtualBox 7.1.12
2025-10-10 09:54:20 (85767): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 09:54:20 (85767): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 09:54:20 (85767): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 09:54:20 (85767): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 09:54:20 (85767): Detected: Web Application Enabled (http://localhost:42303)
2025-10-10 09:54:20 (85767): Preference change detected
2025-10-10 09:54:20 (85767): Setting CPU throttle for VM. (100%)
2025-10-10 09:54:20 (85767): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 09:54:22 (85767): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 09:54:22 (85767): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 09:54:25 (85767): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 09:54:25 (85767): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 09:54:25 (85767): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 09:54:32 (85767): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 09:54:32 (85767): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 09:54:40 (85767): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 09:54:40 (85767): Guest Log: 00:00:00.000212 main     Log opened 2025-10-10T16:54:37.567525000Z
2025-10-10 09:54:40 (85767): Guest Log: 00:00:00.000342 main     OS Product: Linux
2025-10-10 09:54:40 (85767): Guest Log: 00:00:00.000877 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 09:54:40 (85767): Guest Log: 00:00:00.000943 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 09:54:40 (85767): Guest Log: 00:00:00.000982 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 09:54:40 (85767): Guest Log: 00:00:00.000983 main     Process ID: 1294
2025-10-10 09:54:40 (85767): Guest Log: 00:00:00.000984 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 09:54:40 (85767): Guest Log: 00:00:00.002139 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 09:54:40 (85767): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 09:54:40 (85767): Guest Log: [INFO] Mounting shared directory
2025-10-10 09:54:40 (85767): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 09:54:44 (85767): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 09:54:44 (85767): Guest Log: [INFO] Detected branch: prod
2025-10-10 09:54:44 (85767): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 09:54:44 (85767): Guest Log: Copying input files
2025-10-10 09:54:45 (85767): Guest Log: Copied input files into RunAtlas.
2025-10-10 09:54:45 (85767): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 09:54:45 (85767): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 09:54:45 (85767): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 09:54:45 (85767): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 09:54:53 (85767): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 09:54:53 (85767): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 09:54:53 (85767): Guest Log: 2.6.3.0 1568 0 32164 151555 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 09:54:54 (85767): Guest Log: copied the webapp to /var/www
2025-10-10 09:54:54 (85767): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-10 09:54:54 (85767): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-10 09:54:55 (85767): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 09:54:55 (85767): Guest Log:  *** Starting ATLAS job. (PandaID=6837352412 taskID=46676269) ***
2025-10-10 11:33:20 (85767): Status Report: Elapsed Time: '6000.000000'
2025-10-10 11:33:21 (85767): Status Report: CPU Time: '16760.480000'
2025-10-10 13:12:21 (85767): Status Report: Elapsed Time: '12000.321696'
2025-10-10 13:12:21 (85767): Status Report: CPU Time: '34549.240000'
2025-10-10 14:51:22 (85767): Status Report: Elapsed Time: '18000.342454'
2025-10-10 14:51:22 (85767): Status Report: CPU Time: '52354.220000'
2025-10-10 14:58:15 (85767): Guest Log:  *** Job finished ***
2025-10-10 14:58:15 (85767): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:57:59,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:57:59,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:07,394 | INFO     | [monitor] cgroup control has ended
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:07,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200205182784)>', '<ExcThread(monitor, started 140199426234112)>']
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:08,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:08,322 | INFO     | [monitor] control thread has ended
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,402 | INFO     | all workflow threads have been joined
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,403 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,403 | INFO     | traces error code: 0
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,672 [wrapper] ==== pilot stdout END ====
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,684 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,696 [wrapper] pilotpid: 5952
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,708 [wrapper] Pilot exit status: 0
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,808 [wrapper] pandaids: 6837352412
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,874 [wrapper] cleanup supervisor_pilot 20057 5953
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,883 [wrapper] Test setup, not cleaning
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,892 [wrapper] apfmon messages muted
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,901 [wrapper] ==== wrapper stdout END ====
2025-10-10 14:58:15 (85767): Guest Log: 2025-10-10 21:58:12,911 [wrapper] ==== wrapper stderr END ====
2025-10-10 14:58:15 (85767): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 14:58:15 (85767): Guest Log:     "exeErrorCode": 0,
2025-10-10 14:58:15 (85767): Guest Log:     "exeErrorDiag": "",
2025-10-10 14:58:15 (85767): Guest Log:     "pilotErrorCode": 0,
2025-10-10 14:58:15 (85767): Guest Log:     "pilotErrorDiag": "",
2025-10-10 14:58:15 (85767): Guest Log:  *** Listing of results directory ***
2025-10-10 14:58:15 (85767): Guest Log: total 206020
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 15:29 pilot3.tar.gz
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 16:06 queuedata.json
2025-10-10 14:58:15 (85767): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 16:08 runpilot2-wrapper.sh
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 atlas atlas    569681 Oct 10 16:54 input.tar.gz
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 atlas atlas      6168 Oct 10 16:54 init_data.xml
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 10 16:54 start_atlas.sh
2025-10-10 14:58:15 (85767): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 16:54 EVNT.46676267._000909.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 10 16:54 pandaJob.out
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas    975525 Oct 10 16:55 agis_schedconf.cvmfs.json
2025-10-10 14:58:15 (85767): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 16:55 pilot3
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas 201641404 Oct 10 21:56 HITS.46676269._022123.pool.root.1
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 10 21:57 memory_monitor_summary.json
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 21:57 pilot_heartbeat.json
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 21:57 agis_ddmendpoints.agis.ALL.json
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas    431454 Oct 10 21:57 log.46676269._022123.job.log.tgz.1
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas      7790 Oct 10 21:57 heartbeat.json
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 10 21:58 pilotlog.txt
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas   2315383 Oct 10 21:58 log.46676269._022123.job.log.1
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 21:58 output.list
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 21:58 runtime_log
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas   2764800 Oct 10 21:58 result.tar.gz
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 atlas atlas      8630 Oct 10 21:58 runtime_log.err
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas       659 Oct 10 21:58 gc1NDmlM8Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9haNDmKFUxPn.diag
2025-10-10 14:58:15 (85767): Guest Log: Looking for outputfile HITS.46676269._022123.pool.root.1
2025-10-10 14:58:15 (85767): Guest Log: HITS file was successfully produced
2025-10-10 14:58:15 (85767): Guest Log: -rw-------. 1 atlas atlas 201641404 Oct 10 21:56 /home/atlas/RunAtlas/HITS.46676269._022123.pool.root.1
2025-10-10 14:58:15 (85767): Guest Log: Successfully finished the ATLAS job!
2025-10-10 14:58:15 (85767): Guest Log: Copying the results back to the shared directory!
2025-10-10 14:58:15 (85767): Guest Log:  *** Contents of shared directory: ***
2025-10-10 14:58:15 (85767): Guest Log: total 220212
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 root root 222130406 Oct 10 16:54 ATLAS.root_0
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 root root      6168 Oct 10 16:54 init_data.xml
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 root root    569681 Oct 10 16:54 input.tar.gz
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 root root   2764800 Oct 10 21:58 result.tar.gz
2025-10-10 14:58:15 (85767): Guest Log: -rw-r--r--. 1 root root     15120 Oct 10 16:54 start_atlas.sh
2025-10-10 14:58:15 (85767): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 14:58:15 (85767): VM Completion File Detected.
2025-10-10 14:58:15 (85767): Powering off VM.
2025-10-10 14:58:16 (85767): Successfully stopped VM.
2025-10-10 14:58:16 (85767): Deregistering VM. (boinc_ed8cba789474ca91, slot#0)
2025-10-10 14:58:16 (85767): Removing network bandwidth throttle group from VM.
2025-10-10 14:58:16 (85767): Removing VM from VirtualBox.
2025-10-10 14:58:21 (85767): called boinc_finish(0)

</stderr_txt>
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