Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:56:00 (1578290): wrapper (7.7.26015): starting
16:56:00 (1578290): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 16:56:00] Arguments: --nthreads 8
[2025-10-09 16:56:00] Threads: 8
[2025-10-09 16:56:00] Checking for CVMFS
[2025-10-09 16:56:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 16:56:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 16:56:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 16:56:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 16:56:02] 2.13.2.0 2956151 125432 404340 151522 0 891 31857653 32935937 37874 16776704 0 817123787 99.727 568975234 33328 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 16:56:02] CVMFS is ok
[2025-10-09 16:56:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 16:56:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 16:56:02] Further information can be found at the LHC@home message board.
[2025-10-09 16:56:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 16:56:02] Checking for apptainer binary...
[2025-10-09 16:56:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 16:56:02] Running /usr/bin/apptainer --version
[2025-10-09 16:56:02] apptainer version 1.4.3-1.el9
[2025-10-09 16:56:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 16:56:03] c7-9-15.aglt2.org
[2025-10-09 16:56:03] apptainer works
[2025-10-09 16:56:03] Set ATHENA_PROC_NUMBER=8
[2025-10-09 16:56:03] Set ATHENA_CORE_NUMBER=8
[2025-10-09 16:56:03] Starting ATLAS job with PandaID=6837344083
[2025-10-09 16:56:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 18:31:40]  *** The last 200 lines of the pilot log: ***
[2025-10-09 18:31:40] 2025-10-09 22:20:44,920 | INFO     | time since job start (4978s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:20:46,880 | INFO     | monitor loop #356: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:20:46,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:20:46,927 | INFO     | time since job start (4980s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:20:48,934 | INFO     | time since job start (4982s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:20:49,385 | INFO     | monitor loop #357: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:20:49,385 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:20:50,941 | INFO     | time since job start (4984s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:20:51,912 | INFO     | monitor loop #358: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:20:51,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:20:52,958 | INFO     | time since job start (4986s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:20:54,417 | INFO     | monitor loop #359: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:20:54,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:20:54,966 | INFO     | time since job start (4988s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:20:56,932 | INFO     | monitor loop #360: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:20:56,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:20:56,974 | INFO     | time since job start (4990s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:20:58,739 | INFO     | PID=1592231 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 18:31:40] 2025-10-09 22:20:58,739 | INFO     | .. there are 41 such processes running
[2025-10-09 18:31:40] 2025-10-09 22:20:59,439 | INFO     | monitor loop #361: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:20:59,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:20:59,740 | INFO     | time since job start (4993s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:21:01,747 | INFO     | time since job start (4995s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:21:01,944 | INFO     | monitor loop #362: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:21:01,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:21:03,756 | INFO     | time since job start (4997s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:21:04,464 | INFO     | monitor loop #363: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:21:04,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:21:05,766 | INFO     | time since job start (4999s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:21:06,971 | INFO     | monitor loop #364: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:21:06,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:21:07,773 | INFO     | time since job start (5001s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:21:09,478 | INFO     | monitor loop #365: job 0:6837344083 is in state 'finished'
[2025-10-09 18:31:40] 2025-10-09 22:21:09,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 18:31:40] 2025-10-09 22:21:09,780 | INFO     | time since job start (5003s) is within the limit (172800.0s)
[2025-10-09 18:31:40] 2025-10-09 22:21:10,999 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 18:31:40] 2025-10-09 22:21:11,020 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.339343749997
[2025-10-09 18:31:40] 2025-10-09 22:21:11,131 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837344083/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 18:31:40] 2025-10-09 22:21:11,132 | INFO     | extracted standard info from prmon json
[2025-10-09 18:31:40] 2025-10-09 22:21:11,132 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 18:31:40] 2025-10-09 22:21:11,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 18:31:40] 2025-10-09 22:21:11,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 18:31:40] 2025-10-09 22:21:11,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 18:31:40] 2025-10-09 22:21:11,140 | INFO     | fitting pss+swap vs Time
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | sum of square deviations: 115719867.9861112
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | sum of deviations: 7943149040.527779
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | mean x: 1760046132.5138888
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | mean y: 2123875.472222222
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | -- intersect: -120809530960.1542
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | intersect: -120809530960.1542
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | chi2: 0.7669069882160574
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | -- intersect: -120809530960.1542
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | current memory leak: 68.64 B/s (using 72 data points, chi2=0.77)
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | could have reported an average CPU frequency of 3798 MHz (6 samples)
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | ..............................
[2025-10-09 18:31:40] 2025-10-09 22:21:11,141 | INFO     | . Timing measurements:
[2025-10-09 18:31:40] 2025-10-09 22:21:11,142 | INFO     | . get job = 0 s
[2025-10-09 18:31:40] 2025-10-09 22:21:11,142 | INFO     | . initial setup = 9 s
[2025-10-09 18:31:40] 2025-10-09 22:21:11,142 | INFO     | . payload setup = 65 s
[2025-10-09 18:31:40] 2025-10-09 22:21:11,142 | INFO     | . stage-in = 0 s
[2025-10-09 18:31:40] 2025-10-09 22:21:11,142 | INFO     | . payload execution = 4797 s
[2025-10-09 18:31:40] 2025-10-09 22:21:11,142 | INFO     | . stage-out = 3 s
[2025-10-09 18:31:40] 2025-10-09 22:21:11,142 | INFO     | . log creation = 0 s
[2025-10-09 18:31:40] 2025-10-09 22:21:11,142 | INFO     | ..............................
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | 
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | job summary report
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | --------------------------------------------------
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | PanDA job id: 6837344083
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | task id: 46676269
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | errors: (none)
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | pilot state: finished 
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | transexitcode: 0
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | exeerrorcode: 0
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | exeerrordiag: 
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | exitcode: 0
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | exitmsg: OK
[2025-10-09 18:31:40] 2025-10-09 22:21:11,478 | INFO     | cpuconsumptiontime: 22248 s
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | nevents: 400
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | neventsw: 0
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | pid: 1615569
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | pgrp: 1615569
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | corecount: 8
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | event service: False
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | sizes: {0: 2348627, 1: 2348711, 2: 2348910, 13: 2348910, 24: 2348966, 35: 2348994, 46: 2349412, 57: 2349440, 4866: 2375742, 4867: 2375741, 4871: 2384795, 4872: 238
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | --------------------------------------------------
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | 
[2025-10-09 18:31:40] 2025-10-09 22:21:11,479 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | job 6837344083 has completed (purged errors)
[2025-10-09 18:31:40] 2025-10-09 22:21:11,702 | INFO     | overall cleanup function is called
[2025-10-09 18:31:40] 2025-10-09 22:21:12,710 | INFO     | --- collectZombieJob: --- 10, [1615569]
[2025-10-09 18:31:40] 2025-10-09 22:21:12,710 | INFO     | zombie collector waiting for pid 1615569
[2025-10-09 18:31:40] 2025-10-09 22:21:12,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 18:31:40] 2025-10-09 22:21:12,710 | INFO     | collected zombie processes
[2025-10-09 18:31:40] 2025-10-09 22:21:12,710 | INFO     | will attempt to kill all subprocesses of pid=1615569
[2025-10-09 18:31:40] 2025-10-09 22:21:13,815 | INFO     | process IDs to be killed: [1615569] (in reverse order)
[2025-10-09 18:31:40] 2025-10-09 22:21:14,618 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 18:31:40] 2025-10-09 22:21:14,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 18:31:40] 2025-10-09 22:21:14,661 | INFO     | did not find any defunct processes belonging to 1615569
[2025-10-09 18:31:40] 2025-10-09 22:21:14,691 | INFO     | did not find any defunct processes belonging to 1615569
[2025-10-09 18:31:40] 2025-10-09 22:21:14,692 | INFO     | ready for new job
[2025-10-09 18:31:40] 2025-10-09 22:21:14,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 18:31:40] 2025-10-09 22:21:14,694 | INFO     | ***************************************
[2025-10-09 18:31:40] 2025-10-09 22:21:14,694 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 18:31:40] 2025-10-09 22:21:14,694 | INFO     | ***************************************
[2025-10-09 18:31:40] 2025-10-09 22:21:14,694 | INFO     | 
[2025-10-09 18:31:40] 2025-10-09 22:21:14,726 | INFO     | architecture information:
[2025-10-09 18:31:40] 2025-10-09 22:21:14,741 | INFO     | executing command: cat /etc/os-release
[2025-10-09 18:31:40] 2025-10-09 22:21:14,796 | INFO     | cat /etc/os-release:
[2025-10-09 18:31:40] NAME="CentOS Linux"
[2025-10-09 18:31:40] VERSION="7 (Core)"
[2025-10-09 18:31:40] ID="centos"
[2025-10-09 18:31:40] ID_LIKE="rhel fedora"
[2025-10-09 18:31:40] VERSION_ID="7"
[2025-10-09 18:31:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 18:31:40] ANSI_COLOR="0;31"
[2025-10-09 18:31:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 18:31:40] HOME_URL="https://www.centos.org/"
[2025-10-09 18:31:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 18:31:40] 
[2025-10-09 18:31:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 18:31:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 18:31:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 18:31:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 18:31:40] 
[2025-10-09 18:31:40] 2025-10-09 22:21:14,796 | INFO     | ***************************************
[2025-10-09 18:31:40] 2025-10-09 22:21:15,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-09 18:31:40] 2025-10-09 22:21:15,404 | INFO     | sufficient remaining disk space (72766980096 B)
[2025-10-09 18:31:40] 2025-10-09 22:21:15,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 18:31:40] 2025-10-09 22:21:15,405 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 18:31:40] 2025-10-09 22:21:15,405 | INFO     | update_server=False
[2025-10-09 18:31:40] 2025-10-09 22:21:15,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 18:31:40] 2025-10-09 22:21:15,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 18:31:40] 2025-10-09 22:21:15,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 18:31:40] 2025-10-09 22:21:15,570 | INFO     | aborting loop
[2025-10-09 18:31:40] 2025-10-09 22:21:15,593 | INFO     | all data control threads have been joined
[2025-10-09 18:31:40] 2025-10-09 22:21:16,411 | INFO     | [job] retrieve thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:16,450 | INFO     | all payload control threads have been joined
[2025-10-09 18:31:40] 2025-10-09 22:21:16,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 18:31:40] 2025-10-09 22:21:16,576 | INFO     | [job] job monitor thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:16,594 | INFO     | all job control threads have been joined
[2025-10-09 18:31:40] 2025-10-09 22:21:16,599 | INFO     | [data] control thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:16,634 | INFO     | [payload] validate_post thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:16,652 | INFO     | [payload] failed_post thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,001 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,117 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,165 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 18:31:40] 2025-10-09 22:21:17,237 | INFO     | [data] copytool_in thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,400 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,414 | INFO     | [data] copytool_out thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,456 | INFO     | [payload] control thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,482 | INFO     | [job] validate thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,513 | INFO     | [job] queue monitor thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:17,612 | INFO     | [job] control thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:21,199 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:26,012 | INFO     | job.realtimelogging is not enabled
[2025-10-09 18:31:40] 2025-10-09 22:21:27,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 18:31:40] 2025-10-09 22:21:44,041 | INFO     | PID=1592231 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 18:31:40] 2025-10-09 22:21:44,041 | INFO     | .. there are 41 such processes running
[2025-10-09 18:31:40] 2025-10-09 22:21:44,041 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 18:31:40] 2025-10-09 22:21:44,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 18:31:40] 2025-10-09 22:21:44,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 18:31:40] 2025-10-09 22:21:54,171 | INFO     | [monitor] cgroup control has ended
[2025-10-09 18:31:40] 2025-10-09 22:21:56,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140613197219648)>', '<ExcThread(monitor, started 140612682618624)>']
[2025-10-09 18:31:40] 2025-10-09 22:21:57,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 18:31:40] 2025-10-09 22:21:57,122 | INFO     | [monitor] control thread has ended
[2025-10-09 18:31:40] 2025-10-09 22:22:01,324 | INFO     | all workflow threads have been joined
[2025-10-09 18:31:40] 2025-10-09 22:22:01,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 18:31:40] 2025-10-09 22:22:01,324 | INFO     | traces error code: 0
[2025-10-09 18:31:40] 2025-10-09 22:22:01,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 18:31:40] 2025-10-09 22:22:01,574 [wrapper] ==== pilot stdout END ====
[2025-10-09 18:31:40] 2025-10-09 22:22:01,587 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 18:31:40] 2025-10-09 22:22:01,614 [wrapper] pilotpid: 1592231
[2025-10-09 18:31:40] 2025-10-09 22:22:01,642 [wrapper] Pilot exit status: 0
[2025-10-09 18:31:40] 2025-10-09 22:22:01,847 [wrapper] pandaids: 6837344083
[2025-10-09 18:31:40] 2025-10-09 22:22:02,356 [wrapper] cleanup supervisor_pilot 2065874 1592233
[2025-10-09 18:31:40] 2025-10-09 22:22:02,387 [wrapper] Test setup, not cleaning
[2025-10-09 18:31:40] 2025-10-09 22:22:02,408 [wrapper] apfmon messages muted
[2025-10-09 18:31:40] 2025-10-09 22:22:02,465 [wrapper] ==== wrapper stdout END ====
[2025-10-09 18:31:40] 2025-10-09 22:22:02,491 [wrapper] ==== wrapper stderr END ====
[2025-10-09 18:31:40]  *** Error codes and diagnostics ***
[2025-10-09 18:31:40]     "exeErrorCode": 0,
[2025-10-09 18:31:40]     "exeErrorDiag": "",
[2025-10-09 18:31:40]     "pilotErrorCode": 0,
[2025-10-09 18:31:40]     "pilotErrorDiag": "",
[2025-10-09 18:31:40]  *** Listing of results directory ***
[2025-10-09 18:31:40] total 413216
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 09:21 pilot3.tar.gz
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 09:33 queuedata.json
[2025-10-09 18:31:40] -rwx------. 1 boincer umatlas     36292 Oct  9 09:34 runpilot2-wrapper.sh
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas       100 Oct  9 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 18:31:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 16:55 run_atlas
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas       105 Oct  9 16:55 job.xml
[2025-10-09 18:31:40] -rw-r--r--. 2 boincer umatlas 222841334 Oct  9 16:56 EVNT.46676267._000781.pool.root.1
[2025-10-09 18:31:40] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 16:56 start_atlas.sh
[2025-10-09 18:31:40] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 16:56 shared
[2025-10-09 18:31:40] -rw-r--r--. 2 boincer umatlas    569680 Oct  9 16:56 input.tar.gz
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas         0 Oct  9 16:56 boinc_lockfile
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas      2548 Oct  9 16:56 pandaJob.out
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas    975454 Oct  9 16:57 agis_schedconf.cvmfs.json
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas   1560401 Oct  9 16:57 agis_ddmendpoints.agis.ALL.json
[2025-10-09 18:31:40] drwx------. 5 boincer umatlas      4096 Oct  9 16:57 pilot3
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas 194351360 Oct  9 18:19 HITS.46676269._018857.pool.root.1
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas       529 Oct  9 18:19 boinc_task_state.xml
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas      1036 Oct  9 18:20 memory_monitor_summary.json
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas    332377 Oct  9 18:20 log.46676269._018857.job.log.tgz.1
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas        95 Oct  9 18:21 pilot_heartbeat.json
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas      7782 Oct  9 18:21 heartbeat.json
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas      4896 Oct  9 18:22 pilotlog.txt
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas    686692 Oct  9 18:22 log.46676269._018857.job.log.1
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas       357 Oct  9 18:22 output.list
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas       620 Oct  9 18:22 runtime_log
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas   1034240 Oct  9 18:22 result.tar.gz
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas      8698 Oct  9 18:22 runtime_log.err
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas       651 Oct  9 18:22 AnBNDmjx5Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmU0NMDmueUHsm.diag
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas      7161 Oct  9 18:31 init_data.xml
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 18:31 boinc_mmap_file
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas        27 Oct  9 18:31 wrapper_checkpoint.txt
[2025-10-09 18:31:40] -rw-r--r--. 1 boincer umatlas     22340 Oct  9 18:31 stderr.txt
[2025-10-09 18:31:40] HITS file was successfully produced:
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas 194351360 Oct  9 18:19 shared/HITS.pool.root.1
[2025-10-09 18:31:40]  *** Contents of shared directory: ***
[2025-10-09 18:31:40] total 409016
[2025-10-09 18:31:40] -rw-r--r--. 2 boincer umatlas 222841334 Oct  9 16:56 ATLAS.root_0
[2025-10-09 18:31:40] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 16:56 start_atlas.sh
[2025-10-09 18:31:40] -rw-r--r--. 2 boincer umatlas    569680 Oct  9 16:56 input.tar.gz
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas 194351360 Oct  9 18:19 HITS.pool.root.1
[2025-10-09 18:31:40] -rw-------. 1 boincer umatlas   1034240 Oct  9 18:22 result.tar.gz
18:31:42 (1578290): run_atlas exited; CPU time 22343.140136
18:31:42 (1578290): called boinc_finish(0)

</stderr_txt>
]]>

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