Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 23:44:45 (82820): vboxwrapper version 26210
2025-10-09 23:44:45 (82820): BOINC client version: 8.2.4
2025-10-09 23:44:46 (82820): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-10-09 23:44:46 (82820): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 23:44:46 (82820): Create VM. (boinc_475217d3f200b48d, slot#0)
2025-10-09 23:44:46 (82820): Setting Memory Size for VM. (4300MB)
2025-10-09 23:44:46 (82820): Setting CPU Count for VM. (3)
2025-10-09 23:44:46 (82820): Setting Chipset Options for VM.
2025-10-09 23:44:46 (82820): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 23:44:46 (82820): Setting Boot Options for VM.
2025-10-09 23:44:47 (82820): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 23:44:47 (82820): Enabling VM Network Access.
2025-10-09 23:44:47 (82820): Disabling USB Support for VM.
2025-10-09 23:44:47 (82820): Disabling COM Port Support for VM.
2025-10-09 23:44:47 (82820): Disabling LPT Port Support for VM.
2025-10-09 23:44:47 (82820): Disabling Audio Support for VM.
2025-10-09 23:44:47 (82820): Disabling Clipboard Support for VM.
2025-10-09 23:44:47 (82820): Disabling Drag and Drop Support for VM.
2025-10-09 23:44:47 (82820): Adding storage controller(s) to VM.
2025-10-09 23:44:48 (82820): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 23:44:49 (82820): Adding VirtualBox Guest Additions to VM.
2025-10-09 23:44:49 (82820): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 23:44:49 (82820): forwarding host port 60907 to guest port 80
2025-10-09 23:44:49 (82820): Enabling remote desktop for VM.
2025-10-09 23:44:49 (82820): Required extension pack not installed, remote desktop not enabled.
2025-10-09 23:44:49 (82820): Enabling shared directory for VM.
2025-10-09 23:44:49 (82820): Starting VM using VBoxManage interface. (boinc_475217d3f200b48d, slot#0)
2025-10-09 23:44:51 (82820): Successfully started VM. (PID = '83418')
2025-10-09 23:44:51 (82820): Reporting VM Process ID to BOINC.
2025-10-09 23:44:51 (82820): Guest Log: BIOS: VirtualBox 7.1.12
2025-10-09 23:44:51 (82820): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 23:44:51 (82820): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 23:44:51 (82820): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 23:44:51 (82820): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 23:44:51 (82820): Detected: Web Application Enabled (http://localhost:60907)
2025-10-09 23:44:51 (82820): Preference change detected
2025-10-09 23:44:51 (82820): Setting CPU throttle for VM. (100%)
2025-10-09 23:44:51 (82820): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 23:44:53 (82820): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 23:44:53 (82820): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 23:44:56 (82820): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 23:44:56 (82820): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 23:44:56 (82820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 23:45:02 (82820): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 23:45:02 (82820): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 23:45:14 (82820): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 23:45:14 (82820): Guest Log: 00:00:00.000184 main     Log opened 2025-10-10T06:45:13.314041000Z
2025-10-09 23:45:14 (82820): Guest Log: 00:00:00.000298 main     OS Product: Linux
2025-10-09 23:45:14 (82820): Guest Log: 00:00:00.000329 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 23:45:14 (82820): Guest Log: 00:00:00.000351 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 23:45:14 (82820): Guest Log: 00:00:00.000371 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 23:45:14 (82820): Guest Log: 00:00:00.000372 main     Process ID: 1299
2025-10-09 23:45:14 (82820): Guest Log: 00:00:00.000373 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 23:45:14 (82820): Guest Log: 00:00:00.002127 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 23:45:14 (82820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 23:45:14 (82820): Guest Log: [INFO] Mounting shared directory
2025-10-09 23:45:14 (82820): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 23:45:21 (82820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 23:45:21 (82820): Guest Log: [INFO] Detected branch: prod
2025-10-09 23:45:21 (82820): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 23:45:21 (82820): Guest Log: Copying input files
2025-10-09 23:45:22 (82820): Guest Log: Copied input files into RunAtlas.
2025-10-09 23:45:22 (82820): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 23:45:22 (82820): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 23:45:22 (82820): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 23:45:22 (82820): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 23:45:35 (82820): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 23:45:35 (82820): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 23:45:35 (82820): Guest Log: 2.6.3.0 1574 0 30024 151537 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 23:45:36 (82820): Guest Log: copied the webapp to /var/www
2025-10-09 23:45:36 (82820): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-09 23:45:36 (82820): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-09 23:45:37 (82820): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 23:45:37 (82820): Guest Log:  *** Starting ATLAS job. (PandaID=6837350494 taskID=46676269) ***
2025-10-10 01:23:51 (82820): Status Report: Elapsed Time: '6000.163452'
2025-10-10 01:23:52 (82820): Status Report: CPU Time: '16768.260000'
2025-10-10 03:02:52 (82820): Status Report: Elapsed Time: '12000.441398'
2025-10-10 03:02:52 (82820): Status Report: CPU Time: '34583.110000'
2025-10-10 04:41:53 (82820): Status Report: Elapsed Time: '18000.441398'
2025-10-10 04:41:53 (82820): Status Report: CPU Time: '52381.400000'
2025-10-10 04:51:05 (82820): Guest Log:  *** Job finished ***
2025-10-10 04:51:05 (82820): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:50:30,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:50:30,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:50:54,836 | INFO     | [monitor] cgroup control has ended
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:50:56,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854319638336)>', '<ExcThread(monitor, started 139853664614144)>']
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:50:57,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:50:57,399 | INFO     | [monitor] control thread has ended
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:01,514 | INFO     | all workflow threads have been joined
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:01,514 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:01,515 | INFO     | traces error code: 0
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:01,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,343 [wrapper] ==== pilot stdout END ====
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,356 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,370 [wrapper] pilotpid: 5961
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,383 [wrapper] Pilot exit status: 0
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,490 [wrapper] pandaids: 6837350494
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,541 [wrapper] cleanup supervisor_pilot 20053 5962
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,551 [wrapper] Test setup, not cleaning
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,560 [wrapper] apfmon messages muted
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,570 [wrapper] ==== wrapper stdout END ====
2025-10-10 04:51:05 (82820): Guest Log: 2025-10-10 11:51:02,580 [wrapper] ==== wrapper stderr END ====
2025-10-10 04:51:05 (82820): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 04:51:05 (82820): Guest Log:     "exeErrorCode": 0,
2025-10-10 04:51:05 (82820): Guest Log:     "exeErrorDiag": "",
2025-10-10 04:51:05 (82820): Guest Log:     "pilotErrorCode": 0,
2025-10-10 04:51:05 (82820): Guest Log:     "pilotErrorDiag": "",
2025-10-10 04:51:05 (82820): Guest Log:  *** Listing of results directory ***
2025-10-10 04:51:05 (82820): Guest Log: total 200800
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 15:29 pilot3.tar.gz
2025-10-10 04:51:05 (82820): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 15:49 runpilot2-wrapper.sh
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 15:49 queuedata.json
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 atlas atlas    569678 Oct 10 06:45 input.tar.gz
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 atlas atlas      6168 Oct 10 06:45 init_data.xml
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 10 06:45 start_atlas.sh
2025-10-10 04:51:05 (82820): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 06:45 EVNT.46676267._000695.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 10 06:45 pandaJob.out
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas    975446 Oct 10 06:46 agis_schedconf.cvmfs.json
2025-10-10 04:51:05 (82820): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 06:46 pilot3
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas 196295069 Oct 10 11:49 HITS.46676269._021783.pool.root.1
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas      1034 Oct 10 11:49 memory_monitor_summary.json
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 11:49 agis_ddmendpoints.agis.ALL.json
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas    415980 Oct 10 11:49 log.46676269._021783.job.log.tgz.1
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas      7794 Oct 10 11:49 heartbeat.json
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 11:50 pilot_heartbeat.json
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 10 11:51 pilotlog.txt
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas   2332157 Oct 10 11:51 log.46676269._021783.job.log.1
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 11:51 output.list
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 11:51 runtime_log
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas   2764800 Oct 10 11:51 result.tar.gz
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 atlas atlas      8630 Oct 10 11:51 runtime_log.err
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas       659 Oct 10 11:51 i1FKDm047Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmodaNDmF3wE9m.diag
2025-10-10 04:51:05 (82820): Guest Log: Looking for outputfile HITS.46676269._021783.pool.root.1
2025-10-10 04:51:05 (82820): Guest Log: HITS file was successfully produced
2025-10-10 04:51:05 (82820): Guest Log: -rw-------. 1 atlas atlas 196295069 Oct 10 11:49 /home/atlas/RunAtlas/HITS.46676269._021783.pool.root.1
2025-10-10 04:51:05 (82820): Guest Log: Successfully finished the ATLAS job!
2025-10-10 04:51:05 (82820): Guest Log: Copying the results back to the shared directory!
2025-10-10 04:51:05 (82820): Guest Log:  *** Contents of shared directory: ***
2025-10-10 04:51:05 (82820): Guest Log: total 221856
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 root root 223816936 Oct 10 06:44 ATLAS.root_0
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 root root      6168 Oct 10 06:44 init_data.xml
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 root root    569678 Oct 10 06:44 input.tar.gz
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 root root   2764800 Oct 10 11:51 result.tar.gz
2025-10-10 04:51:05 (82820): Guest Log: -rw-r--r--. 1 root root     15120 Oct 10 06:44 start_atlas.sh
2025-10-10 04:51:05 (82820): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 04:51:05 (82820): VM Completion File Detected.
2025-10-10 04:51:05 (82820): Powering off VM.
2025-10-10 04:51:06 (82820): Successfully stopped VM.
2025-10-10 04:51:06 (82820): Deregistering VM. (boinc_475217d3f200b48d, slot#0)
2025-10-10 04:51:06 (82820): Removing network bandwidth throttle group from VM.
2025-10-10 04:51:07 (82820): Removing VM from VirtualBox.
2025-10-10 04:51:12 (82820): called boinc_finish(0)

</stderr_txt>
]]>

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