Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 14:34:38 (11684): vboxwrapper version 26210
2025-10-09 14:34:38 (11684): BOINC client version: 8.2.4
2025-10-09 14:34:39 (11684): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-09 14:34:39 (11684): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 14:34:40 (11684): Create VM. (boinc_d566e694407e8e43, slot#1)
2025-10-09 14:34:40 (11684): Setting Memory Size for VM. (4800MB)
2025-10-09 14:34:40 (11684): Setting CPU Count for VM. (8)
2025-10-09 14:34:41 (11684): Setting Chipset Options for VM.
2025-10-09 14:34:41 (11684): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 14:34:41 (11684): Setting Boot Options for VM.
2025-10-09 14:34:42 (11684): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 14:34:42 (11684): Enabling VM Network Access.
2025-10-09 14:34:42 (11684): Disabling USB Support for VM.
2025-10-09 14:34:43 (11684): Disabling COM Port Support for VM.
2025-10-09 14:34:43 (11684): Disabling LPT Port Support for VM.
2025-10-09 14:34:43 (11684): Disabling Audio Support for VM.
2025-10-09 14:34:43 (11684): Disabling Clipboard Support for VM.
2025-10-09 14:34:44 (11684): Disabling Drag and Drop Support for VM.
2025-10-09 14:34:44 (11684): Adding storage controller(s) to VM.
2025-10-09 14:34:44 (11684): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 14:34:46 (11684): Adding VirtualBox Guest Additions to VM.
2025-10-09 14:34:47 (11684): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 14:34:47 (11684): forwarding host port 57871 to guest port 80
2025-10-09 14:34:47 (11684): Enabling remote desktop for VM.
2025-10-09 14:34:48 (11684): Enabling shared directory for VM.
2025-10-09 14:34:49 (11684): Starting VM using VBoxManage interface. (boinc_d566e694407e8e43, slot#1)
2025-10-09 14:34:53 (11684): Successfully started VM. (PID = '21860')
2025-10-09 14:34:53 (11684): Reporting VM Process ID to BOINC.
2025-10-09 14:34:53 (11684): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-09 14:34:53 (11684): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 14:34:53 (11684): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 14:34:53 (11684): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 14:34:53 (11684): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 14:34:53 (11684): Detected: Web Application Enabled (http://localhost:57871)
2025-10-09 14:34:53 (11684): Detected: Remote Desktop Enabled (localhost:57872)
2025-10-09 14:34:53 (11684): Preference change detected
2025-10-09 14:34:53 (11684): Setting CPU throttle for VM. (100%)
2025-10-09 14:34:53 (11684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 14:34:55 (11684): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 14:34:55 (11684): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 14:34:58 (11684): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 14:34:58 (11684): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 14:34:58 (11684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 14:35:15 (11684): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 14:35:15 (11684): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 14:36:02 (11684): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 14:36:02 (11684): Guest Log: 00:00:00.000058 main     Log opened 2025-10-09T14:36:06.107978000Z
2025-10-09 14:36:02 (11684): Guest Log: 00:00:00.000141 main     OS Product: Linux
2025-10-09 14:36:02 (11684): Guest Log: 00:00:00.000159 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 14:36:02 (11684): Guest Log: 00:00:00.000175 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 14:36:02 (11684): Guest Log: 00:00:00.000190 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 14:36:02 (11684): Guest Log: 00:00:00.000190 main     Process ID: 1393
2025-10-09 14:36:02 (11684): Guest Log: 00:00:00.000191 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 14:36:02 (11684): Guest Log: 00:00:00.000572 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 14:36:02 (11684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 14:36:02 (11684): Guest Log: [INFO] Mounting shared directory
2025-10-09 14:36:02 (11684): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 14:36:06 (11684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 14:36:06 (11684): Guest Log: [INFO] Detected branch: prod
2025-10-09 14:36:07 (11684): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 14:36:07 (11684): Guest Log: Copying input files
2025-10-09 14:36:07 (11684): Guest Log: Copied input files into RunAtlas.
2025-10-09 14:36:08 (11684): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 14:36:08 (11684): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 14:36:08 (11684): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 14:36:08 (11684): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 14:36:11 (11684): Guest Log: 00:00:10.005641 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 152 292 281 000ns (GuestNow=1 760 045 718 401 397 000 ns GuestLast=1 760 020 566 109 116 000 ns fSetTimeLastLoop=true )
2025-10-09 14:36:15 (11684): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 14:36:15 (11684): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 14:36:15 (11684): Guest Log: 2.6.3.0 1674 0 30148 151524 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 14:36:18 (11684): Guest Log: copied the webapp to /var/www
2025-10-09 14:36:18 (11684): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-09 14:36:18 (11684): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-09 14:36:18 (11684): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 14:36:18 (11684): Guest Log:  *** Starting ATLAS job. (PandaID=6837350349 taskID=46676269) ***
2025-10-09 15:28:01 (11684): Guest Log:  *** Job finished ***
2025-10-09 15:28:01 (11684): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:40,837 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:40,837 | INFO     | traces error code: 0
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:40,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,540 | INFO     | PID=6084 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,541 | INFO     | found 0 job(s) in 20 queues
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,541 | CRITICAL | thread 'MainThread' is not alive
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,541 | INFO     | [monitor] control thread has ended
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,620 [wrapper] ==== pilot stdout END ====
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,622 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,624 [wrapper] pilotpid: 6084
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,627 [wrapper] Pilot exit status: 0
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,679 [wrapper] pandaids: 6837350349
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,694 [wrapper] cleanup supervisor_pilot 22140 6085
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,697 [wrapper] Test setup, not cleaning
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,699 [wrapper] apfmon messages muted
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,701 [wrapper] ==== wrapper stdout END ====
2025-10-09 15:28:01 (11684): Guest Log: 2025-10-09 22:31:53,703 [wrapper] ==== wrapper stderr END ====
2025-10-09 15:28:01 (11684): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 15:28:01 (11684): Guest Log:     "exeErrorCode": 0,
2025-10-09 15:28:01 (11684): Guest Log:     "exeErrorDiag": "",
2025-10-09 15:28:01 (11684): Guest Log:     "pilotErrorCode": 0,
2025-10-09 15:28:01 (11684): Guest Log:     "pilotErrorDiag": "",
2025-10-09 15:28:01 (11684): Guest Log:  *** Listing of results directory ***
2025-10-09 15:28:01 (11684): Guest Log: total 193892
2025-10-09 15:28:01 (11684): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 15:29 pilot3.tar.gz
2025-10-09 15:28:01 (11684): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 15:45 runpilot2-wrapper.sh
2025-10-09 15:28:01 (11684): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 15:45 queuedata.json
2025-10-09 15:28:01 (11684): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 21:35 start_atlas.sh
2025-10-09 15:28:01 (11684): Guest Log: -rwxr-xr-x. 1 atlas atlas    569673 Oct  9 21:35 input.tar.gz
2025-10-09 15:28:01 (11684): Guest Log: -rwxr-xr-x. 1 atlas atlas      8956 Oct  9 21:35 init_data.xml
2025-10-09 15:28:01 (11684): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 21:35 EVNT.46676267._000504.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 15:28:01 (11684): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct  9 21:35 pandaJob.out
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas    975454 Oct  9 21:36 agis_schedconf.cvmfs.json
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 21:36 agis_ddmendpoints.agis.ALL.json
2025-10-09 15:28:01 (11684): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 21:36 pilot3
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas 193157022 Oct  9 22:30 HITS.46676269._021716.pool.root.1
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas      1027 Oct  9 22:31 memory_monitor_summary.json
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas    305196 Oct  9 22:31 log.46676269._021716.job.log.tgz.1
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas      7790 Oct  9 22:31 heartbeat.json
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas       814 Oct  9 22:31 pilotlog.txt
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 22:31 pilot_heartbeat.json
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas    478770 Oct  9 22:31 log.46676269._021716.job.log.1
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 22:31 output.list
2025-10-09 15:28:01 (11684): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 22:31 runtime_log
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas    798720 Oct  9 22:31 result.tar.gz
2025-10-09 15:28:01 (11684): Guest Log: -rw-r--r--. 1 atlas atlas      8633 Oct  9 22:31 runtime_log.err
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas       650 Oct  9 22:31 fuIMDmv07Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3FOMDm1maJIo.diag
2025-10-09 15:28:01 (11684): Guest Log: Looking for outputfile HITS.46676269._021716.pool.root.1
2025-10-09 15:28:01 (11684): Guest Log: HITS file was successfully produced
2025-10-09 15:28:01 (11684): Guest Log: -rw-------. 1 atlas atlas 193157022 Oct  9 22:30 /home/atlas/RunAtlas/HITS.46676269._021716.pool.root.1
2025-10-09 15:28:02 (11684): Guest Log: Successfully finished the ATLAS job!
2025-10-09 15:28:02 (11684): Guest Log: Copying the results back to the shared directory!
2025-10-09 15:28:02 (11684): Guest Log:  *** Contents of shared directory: ***
2025-10-09 15:28:02 (11684): Guest Log: total 406580
2025-10-09 15:28:02 (11684): Guest Log: -rwxrwxrwx. 1 root root 221774130 Oct  9 21:34 ATLAS.root_0
2025-10-09 15:28:02 (11684): Guest Log: -rwxrwxrwx. 1 root root 193157022 Oct  9 22:28 HITS.pool.root.1
2025-10-09 15:28:02 (11684): Guest Log: -rwxrwxrwx. 1 root root      8956 Oct  9 21:34 init_data.xml
2025-10-09 15:28:02 (11684): Guest Log: -rwxrwxrwx. 1 root root    569673 Oct  9 20:34 input.tar.gz
2025-10-09 15:28:02 (11684): Guest Log: -rwxrwxrwx. 1 root root    798720 Oct  9 22:28 result.tar.gz
2025-10-09 15:28:02 (11684): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 20:34 start_atlas.sh
2025-10-09 15:28:02 (11684): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 15:28:02 (11684): VM Completion File Detected.
2025-10-09 15:28:02 (11684): Powering off VM.
2025-10-09 15:28:03 (11684): Successfully stopped VM.
2025-10-09 15:28:03 (11684): Deregistering VM. (boinc_d566e694407e8e43, slot#1)
2025-10-09 15:28:03 (11684): Removing network bandwidth throttle group from VM.
2025-10-09 15:28:03 (11684): Removing VM from VirtualBox.
2025-10-09 15:28:08 (11684): called boinc_finish(0)

</stderr_txt>
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