Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:31:51 (2774923): wrapper (7.7.26015): starting
13:31:51 (2774923): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 13:31:51] Arguments: --nthreads 12
[2025-10-09 13:31:51] Threads: 12
[2025-10-09 13:31:51] Checking for CVMFS
[2025-10-09 13:31:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 13:31:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 13:31:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 13:31:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 13:31:53] 2.11.5.0 2579 27658 224360 151522 0 231 40159937 45568000 12292 130560 0 267238779 99.862 118990018 27505 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 13:31:53] CVMFS is ok
[2025-10-09 13:31:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 13:31:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 13:31:53] Further information can be found at the LHC@home message board.
[2025-10-09 13:31:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 13:31:53] Checking for apptainer binary...
[2025-10-09 13:31:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 13:31:53] Running /usr/bin/apptainer --version
[2025-10-09 13:31:53] apptainer version 1.4.1-1.el9
[2025-10-09 13:31:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 13:31:54] wns0061.triumf.lcg
[2025-10-09 13:31:54] apptainer works
[2025-10-09 13:31:54] Set ATHENA_PROC_NUMBER=12
[2025-10-09 13:31:54] Set ATHENA_CORE_NUMBER=12
[2025-10-09 13:31:54] Starting ATLAS job with PandaID=6837354763
[2025-10-09 13:31:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 13:38:49]  *** The last 200 lines of the pilot log: ***
[2025-10-09 13:38:49] 2025-10-09 20:38:12,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | WARNING  | wrong length of table data, x=[1760042106.0], y=[2067.0] (must be same and length>=4)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | could have reported an average CPU frequency of 2689 MHz (4 samples)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | ..............................
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . Timing measurements:
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . get job = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . initial setup = 4 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . payload setup = 37 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . stage-in = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . payload execution = 83 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . stage-out = 1 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . log creation = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | ..............................
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 13:38:49] 2025-10-09 20:38:12,509 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837354763/pilotlog.txt
[2025-10-09 13:38:49] 2025-10-09 20:38:12,523 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 13:38:49] - Log from pilotlog.txt -
[2025-10-09 13:38:49] 2025-10-09 20:38:12,506 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837354763/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,506 | INFO     | extracted standard info from prmon json
[2025-10-09 13:38:49] 2025-10-09 20:38:12,506 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 13:38:49] 2025-10-09 20:38:12,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 13:38:49] 2025-10-09 20:38:12,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 13:38:49] 2025-10-09 20:38:12,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | WARNING  | wrong length of table data, x=[1760042106.0], y=[2067.0] (must be same and length>=4)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | could have reported an average CPU frequency of 2689 MHz (4 samples)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | ..............................
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . Timing measurements:
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . get job = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . initial setup = 4 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . payload setup = 37 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . stage-in = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . payload execution = 83 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . stage-out = 1 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . log creation = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | ..............................
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 13:38:49] 2025-10-09 20:38:12,509 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837354763/pilotlog.txt
[2025-10-09 13:38:49] 2025-10-09 20:38:12,523 | WARNING  | 
[2025-10-09 13:38:49] [begin log extracts]
[2025-10-09 13:38:49] - Log from pilotlog.txt -
[2025-10-09 13:38:49] 2025-10-09 20:38:12,506 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837354763/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,506 | INFO     | extracted standard info from prmon json
[2025-10-09 13:38:49] 2025-10-09 20:38:12,506 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 13:38:49] 2025-10-09 20:38:12,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 13:38:49] 2025-10-09 20:38:12,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 13:38:49] 2025-10-09 20:38:12,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | WARNING  | wrong length of table data, x=[1760042106.0], y=[2067.0] (must be same and length>=4)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | could have reported an average CPU frequency of 2689 MHz (4 samples)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | ..............................
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . Timing measurements:
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . get job = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . initial setup = 4 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . payload setup = 37 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . stage-in = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . payload execution = 83 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . stage-out = 1 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | . log creation = 0 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | ..............................
[2025-10-09 13:38:49] 2025-10-09 20:38:12,508 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 13:38:49] 2025-10-09 20:38:12,509 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837354763/pilotlog.txt
[2025-10-09 13:38:49] [end log extracts]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,523 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,524 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 13:38:49] 2025-10-09 20:38:12,594 | INFO     | 
[2025-10-09 13:38:49] 2025-10-09 20:38:12,595 | INFO     | job summary report
[2025-10-09 13:38:49] 2025-10-09 20:38:12,595 | INFO     | --------------------------------------------------
[2025-10-09 13:38:49] 2025-10-09 20:38:12,595 | INFO     | PanDA job id: 6837354763
[2025-10-09 13:38:49] 2025-10-09 20:38:12,595 | INFO     | task id: 46676269
[2025-10-09 13:38:49] 2025-10-09 20:38:12,595 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 13:35:49,502 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 13:38:49] 2025-10-09 20:38:12,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | pilot state: failed 
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | transexitcode: 65
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | exeerrorcode: 65
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | exitcode: 65
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | cpuconsumptiontime: 18 s
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | nevents: 0
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | neventsw: 0
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | pid: 2785332
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | pgrp: 2785332
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | corecount: 12
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | event service: False
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | sizes: {0: 2348027, 1: 2348709, 2: 2348709, 3: 2348936, 14: 2348936, 25: 2348964, 36: 2349120, 37: 2349410, 47: 2349438, 125: 2372671, 128: 2377299, 257: 2377437}
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | --------------------------------------------------
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | 
[2025-10-09 13:38:49] 2025-10-09 20:38:12,596 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 13:38:49] 2025-10-09 20:38:12,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | job 6837354763 has completed (purged errors)
[2025-10-09 13:38:49] 2025-10-09 20:38:12,714 | INFO     | overall cleanup function is called
[2025-10-09 13:38:49] 2025-10-09 20:38:13,721 | INFO     | --- collectZombieJob: --- 10, [2785332]
[2025-10-09 13:38:49] 2025-10-09 20:38:13,722 | INFO     | zombie collector waiting for pid 2785332
[2025-10-09 13:38:49] 2025-10-09 20:38:13,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 13:38:49] 2025-10-09 20:38:13,722 | INFO     | collected zombie processes
[2025-10-09 13:38:49] 2025-10-09 20:38:13,722 | INFO     | will attempt to kill all subprocesses of pid=2785332
[2025-10-09 13:38:49] 2025-10-09 20:38:14,024 | INFO     | process IDs to be killed: [2785332] (in reverse order)
[2025-10-09 13:38:49] 2025-10-09 20:38:14,100 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 13:38:49] 2025-10-09 20:38:14,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 13:38:49] 2025-10-09 20:38:14,107 | INFO     | did not find any defunct processes belonging to 2785332
[2025-10-09 13:38:49] 2025-10-09 20:38:14,113 | INFO     | did not find any defunct processes belonging to 2785332
[2025-10-09 13:38:49] 2025-10-09 20:38:14,113 | INFO     | ready for new job
[2025-10-09 13:38:49] 2025-10-09 20:38:14,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 13:38:49] 2025-10-09 20:38:14,115 | INFO     | ***************************************
[2025-10-09 13:38:49] 2025-10-09 20:38:14,115 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 13:38:49] 2025-10-09 20:38:14,115 | INFO     | ***************************************
[2025-10-09 13:38:49] 2025-10-09 20:38:14,115 | INFO     | 
[2025-10-09 13:38:49] 2025-10-09 20:38:14,117 | INFO     | architecture information:
[2025-10-09 13:38:49] 2025-10-09 20:38:14,117 | INFO     | executing command: cat /etc/os-release
[2025-10-09 13:38:49] 2025-10-09 20:38:14,131 | INFO     | cat /etc/os-release:
[2025-10-09 13:38:49] NAME="CentOS Linux"
[2025-10-09 13:38:49] VERSION="7 (Core)"
[2025-10-09 13:38:49] ID="centos"
[2025-10-09 13:38:49] ID_LIKE="rhel fedora"
[2025-10-09 13:38:49] VERSION_ID="7"
[2025-10-09 13:38:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 13:38:49] ANSI_COLOR="0;31"
[2025-10-09 13:38:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 13:38:49] HOME_URL="https://www.centos.org/"
[2025-10-09 13:38:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 13:38:49] 
[2025-10-09 13:38:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 13:38:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 13:38:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 13:38:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 13:38:49] 
[2025-10-09 13:38:49] 2025-10-09 20:38:14,131 | INFO     | ***************************************
[2025-10-09 13:38:49] 2025-10-09 20:38:14,635 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 13:38:49] 2025-10-09 20:38:14,677 | INFO     | sufficient remaining disk space (1955594240000 B)
[2025-10-09 13:38:49] 2025-10-09 20:38:14,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 13:38:49] 2025-10-09 20:38:14,678 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 13:38:49] 2025-10-09 20:38:14,678 | INFO     | update_server=False
[2025-10-09 13:38:49] 2025-10-09 20:38:14,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 13:38:49] 2025-10-09 20:38:14,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 13:38:49] 2025-10-09 20:38:14,976 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 13:38:49] 2025-10-09 20:38:14,977 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 13:38:49] 2025-10-09 20:38:14,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 13:38:49] 2025-10-09 20:38:14,977 | INFO     | will abort loop
[2025-10-09 13:38:49] 2025-10-09 20:38:15,028 | INFO     | all data control threads have been joined
[2025-10-09 13:38:49] 2025-10-09 20:38:15,652 | INFO     | all job control threads have been joined
[2025-10-09 13:38:49] 2025-10-09 20:38:15,686 | INFO     | [job] retrieve thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:15,789 | INFO     | all payload control threads have been joined
[2025-10-09 13:38:49] 2025-10-09 20:38:15,915 | INFO     | [payload] failed_post thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:15,983 | INFO     | [job] job monitor thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,035 | INFO     | [data] control thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,050 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,107 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,223 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,372 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,435 | INFO     | [data] copytool_in thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,524 | INFO     | [payload] validate_post thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 13:38:49] 2025-10-09 20:38:16,659 | INFO     | [job] control thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,789 | INFO     | [data] copytool_out thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,796 | INFO     | [payload] control thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:16,994 | INFO     | [job] validate thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:17,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 13:38:49] 2025-10-09 20:38:18,616 | INFO     | [job] queue monitor thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:20,563 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 13:38:49] 2025-10-09 20:38:42,385 | INFO     | [monitor] cgroup control has ended
[2025-10-09 13:38:49] 2025-10-09 20:38:42,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197914543936)>', '<ExcThread(monitor, started 140197362644736)>']
[2025-10-09 13:38:49] 2025-10-09 20:38:44,486 | INFO     | PID=2778623 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 13:38:49] 2025-10-09 20:38:44,486 | INFO     | .. there are 14 such processes running
[2025-10-09 13:38:49] 2025-10-09 20:38:44,487 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 13:38:49] 2025-10-09 20:38:44,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 13:38:49] 2025-10-09 20:38:44,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 13:38:49] 2025-10-09 20:38:44,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 13:38:49] 2025-10-09 20:38:44,487 | INFO     | [monitor] control thread has ended
[2025-10-09 13:38:49] 2025-10-09 20:38:47,830 | INFO     | all workflow threads have been joined
[2025-10-09 13:38:49] 2025-10-09 20:38:47,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 13:38:49] 2025-10-09 20:38:47,831 | INFO     | traces error code: 0
[2025-10-09 13:38:49] 2025-10-09 20:38:47,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 13:38:49] 2025-10-09 20:38:48,131 [wrapper] ==== pilot stdout END ====
[2025-10-09 13:38:49] 2025-10-09 20:38:48,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 13:38:49] 2025-10-09 20:38:48,190 [wrapper] pilotpid: 2778623
[2025-10-09 13:38:49] 2025-10-09 20:38:48,222 [wrapper] Pilot exit status: 0
[2025-10-09 13:38:49] 2025-10-09 20:38:48,388 [wrapper] pandaids: 6837354763
[2025-10-09 13:38:49] 2025-10-09 20:38:48,884 [wrapper] cleanup supervisor_pilot 2778629 2778624
[2025-10-09 13:38:49] 2025-10-09 20:38:48,898 [wrapper] Test setup, not cleaning
[2025-10-09 13:38:49] 2025-10-09 20:38:48,920 [wrapper] apfmon messages muted
[2025-10-09 13:38:49] 2025-10-09 20:38:48,933 [wrapper] ==== wrapper stdout END ====
[2025-10-09 13:38:49] 2025-10-09 20:38:48,993 [wrapper] ==== wrapper stderr END ====
[2025-10-09 13:38:49]  *** Error codes and diagnostics ***
[2025-10-09 13:38:49]     "exeErrorCode": 65,
[2025-10-09 13:38:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 13:38:49]     "pilotErrorCode": 1305,
[2025-10-09 13:38:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 13:38:49]  *** Listing of results directory ***
[2025-10-09 13:38:49] total 220728
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc      5112 Oct  9 10:41 queuedata.json
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc    557409 Oct  9 10:41 pilot3.tar.gz
[2025-10-09 13:38:49] -rwx------. 1 boinc boinc     36292 Oct  9 10:41 runpilot2-wrapper.sh
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc       100 Oct  9 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 13:38:49] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 13:31 run_atlas
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc       105 Oct  9 13:31 job.xml
[2025-10-09 13:38:49] -rw-r--r--. 2 boinc boinc 221885021 Oct  9 13:31 EVNT.46676267._000971.pool.root.1
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc      6594 Oct  9 13:31 init_data.xml
[2025-10-09 13:38:49] -rw-r--r--. 2 boinc boinc     15120 Oct  9 13:31 start_atlas.sh
[2025-10-09 13:38:49] drwxrwx--x. 2 boinc boinc      4096 Oct  9 13:31 shared
[2025-10-09 13:38:49] -rw-r--r--. 2 boinc boinc    569679 Oct  9 13:31 input.tar.gz
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc         0 Oct  9 13:31 boinc_lockfile
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc      2549 Oct  9 13:31 pandaJob.out
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc    975454 Oct  9 13:32 agis_schedconf.cvmfs.json
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc   1560401 Oct  9 13:32 agis_ddmendpoints.agis.ALL.json
[2025-10-09 13:38:49] drwx------. 5 boinc boinc      4096 Oct  9 13:32 pilot3
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc       523 Oct  9 13:35 boinc_task_state.xml
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc       950 Oct  9 13:35 memory_monitor_summary.json
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc     22516 Oct  9 13:36 log.46676269._023657.job.log.tgz.1
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc      8390 Oct  9 13:38 heartbeat.json
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc        95 Oct  9 13:38 pilot_heartbeat.json
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc        22 Oct  9 13:38 wrapper_checkpoint.txt
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc      8192 Oct  9 13:38 boinc_mmap_file
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc      5009 Oct  9 13:38 pilotlog.txt
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc     98202 Oct  9 13:38 log.46676269._023657.job.log.1
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc       188 Oct  9 13:38 output.list
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc       620 Oct  9 13:38 runtime_log
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc    143360 Oct  9 13:38 result.tar.gz
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc      8528 Oct  9 13:38 runtime_log.err
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc       644 Oct  9 13:38 LYLODmoo9Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOwaNDmBKj3Nm.diag
[2025-10-09 13:38:49] -rw-r--r--. 1 boinc boinc     21872 Oct  9 13:38 stderr.txt
[2025-10-09 13:38:49] No HITS result produced
[2025-10-09 13:38:49]  *** Contents of shared directory: ***
[2025-10-09 13:38:49] total 217404
[2025-10-09 13:38:49] -rw-r--r--. 2 boinc boinc 221885021 Oct  9 13:31 ATLAS.root_0
[2025-10-09 13:38:49] -rw-r--r--. 2 boinc boinc     15120 Oct  9 13:31 start_atlas.sh
[2025-10-09 13:38:49] -rw-r--r--. 2 boinc boinc    569679 Oct  9 13:31 input.tar.gz
[2025-10-09 13:38:49] -rw-------. 1 boinc boinc    143360 Oct  9 13:38 result.tar.gz
13:38:50 (2774923): run_atlas exited; CPU time 31.451467
13:38:50 (2774923): called boinc_finish(0)

</stderr_txt>
]]>

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