Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:50:43 (3248694): wrapper (7.7.26015): starting
15:50:43 (3248694): wrapper: running run_atlas (--nthreads 9)
[2025-10-09 15:50:43] Arguments: --nthreads 9
[2025-10-09 15:50:43] Threads: 9
[2025-10-09 15:50:43] Checking for CVMFS
[2025-10-09 15:50:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 15:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 15:50:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 15:50:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 15:50:44] 2.13.2.0 108345 125367 578604 151521 1 277 32601578 32935936 27204 16776704 0 221885046 99.565 244217426 20714 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 15:50:44] CVMFS is ok
[2025-10-09 15:50:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 15:50:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 15:50:44] Further information can be found at the LHC@home message board.
[2025-10-09 15:50:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 15:50:44] Checking for apptainer binary...
[2025-10-09 15:50:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 15:50:44] Running /usr/bin/apptainer --version
[2025-10-09 15:50:44] apptainer version 1.4.3-1.el9
[2025-10-09 15:50:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 15:50:44] c6-8-25-2.aglt2.org
[2025-10-09 15:50:44] apptainer works
[2025-10-09 15:50:44] Set ATHENA_PROC_NUMBER=9
[2025-10-09 15:50:44] Set ATHENA_CORE_NUMBER=9
[2025-10-09 15:50:44] Starting ATLAS job with PandaID=6837339830
[2025-10-09 15:50:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 18:10:27]  *** The last 200 lines of the pilot log: ***
[2025-10-09 18:10:27] 2025-10-09 22:09:43,605 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 18:10:27] 2025-10-09 22:09:43,608 | INFO     | fitting pss+swap vs Time
[2025-10-09 18:10:27] 2025-10-09 22:09:43,608 | INFO     | sum of square deviations: 779919205.735295
[2025-10-09 18:10:27] 2025-10-09 22:09:43,609 | INFO     | sum of deviations: 10441430533.205894
[2025-10-09 18:10:27] 2025-10-09 22:09:43,609 | INFO     | mean x: 1760043637.9558823
[2025-10-09 18:10:27] 2025-10-09 22:09:43,609 | INFO     | mean y: 2132279.367647059
[2025-10-09 18:10:27] 2025-10-09 22:09:43,609 | INFO     | -- intersect: -23561043554.72589
[2025-10-09 18:10:27] 2025-10-09 22:09:43,609 | INFO     | intersect: -23561043554.72589
[2025-10-09 18:10:27] 2025-10-09 22:09:43,610 | INFO     | chi2: 2.6457286596437286
[2025-10-09 18:10:27] 2025-10-09 22:09:43,610 | INFO     | sum of square deviations: 697026060.5954199
[2025-10-09 18:10:27] 2025-10-09 22:09:43,610 | INFO     | sum of deviations: 18357031280.961834
[2025-10-09 18:10:27] 2025-10-09 22:09:43,611 | INFO     | mean x: 1760043485.465649
[2025-10-09 18:10:27] 2025-10-09 22:09:43,611 | INFO     | mean y: 2146411.2137404582
[2025-10-09 18:10:27] 2025-10-09 22:09:43,611 | INFO     | -- intersect: -46350745030.09992
[2025-10-09 18:10:27] 2025-10-09 22:09:43,611 | INFO     | intersect: -46350745030.09992
[2025-10-09 18:10:27] 2025-10-09 22:09:43,611 | INFO     | chi2: 1.8774109180490566
[2025-10-09 18:10:27] 2025-10-09 22:09:43,611 | INFO     | current chi2=1.8774109180490566 (change=29.03992965394014 %)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,611 | INFO     | sum of square deviations: 620209704.8015863
[2025-10-09 18:10:27] 2025-10-09 22:09:43,612 | INFO     | sum of deviations: 18427388520.380955
[2025-10-09 18:10:27] 2025-10-09 22:09:43,612 | INFO     | mean x: 1760043332.9603174
[2025-10-09 18:10:27] 2025-10-09 22:09:43,612 | INFO     | mean y: 2146549.476190476
[2025-10-09 18:10:27] 2025-10-09 22:09:43,612 | INFO     | -- intersect: -52291460045.315414
[2025-10-09 18:10:27] 2025-10-09 22:09:43,612 | INFO     | intersect: -52291460045.315414
[2025-10-09 18:10:27] 2025-10-09 22:09:43,613 | INFO     | chi2: 1.8746318494543102
[2025-10-09 18:10:27] 2025-10-09 22:09:43,613 | INFO     | current chi2=1.8746318494543102 (change=0.14802665564735987 %)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,613 | INFO     | right removable region: 125
[2025-10-09 18:10:27] 2025-10-09 22:09:43,613 | INFO     | sum of square deviations: 697004710.5954199
[2025-10-09 18:10:27] 2025-10-09 22:09:43,614 | INFO     | sum of deviations: -11232816725.877863
[2025-10-09 18:10:27] 2025-10-09 22:09:43,614 | INFO     | mean x: 1760043790.465649
[2025-10-09 18:10:27] 2025-10-09 22:09:43,614 | INFO     | mean y: 2171727.9160305345
[2025-10-09 18:10:27] 2025-10-09 22:09:43,614 | INFO     | -- intersect: 28366756683.06099
[2025-10-09 18:10:27] 2025-10-09 22:09:43,614 | INFO     | intersect: 28366756683.06099
[2025-10-09 18:10:27] 2025-10-09 22:09:43,614 | INFO     | chi2: 0.9747830571119683
[2025-10-09 18:10:27] 2025-10-09 22:09:43,615 | INFO     | current chi2=0.9747830571119683 (change=63.15634811760206 %)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,615 | INFO     | sum of square deviations: 620175361.9682542
[2025-10-09 18:10:27] 2025-10-09 22:09:43,615 | INFO     | sum of deviations: -14096464261.047623
[2025-10-09 18:10:27] 2025-10-09 22:09:43,616 | INFO     | mean x: 1760043942.984127
[2025-10-09 18:10:27] 2025-10-09 22:09:43,616 | INFO     | mean y: 2177247.976190476
[2025-10-09 18:10:27] 2025-10-09 22:09:43,616 | INFO     | -- intersect: 40007630643.300026
[2025-10-09 18:10:27] 2025-10-09 22:09:43,616 | INFO     | intersect: 40007630643.300026
[2025-10-09 18:10:27] 2025-10-09 22:09:43,616 | INFO     | chi2: 0.890799981383138
[2025-10-09 18:10:27] 2025-10-09 22:09:43,616 | INFO     | current chi2=0.890799981383138 (change=8.615565803703094 %)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,616 | INFO     | left removable region: 20
[2025-10-09 18:10:27] 2025-10-09 22:09:43,616 | INFO     | sum of square deviations: 358869624.2476191
[2025-10-09 18:10:27] 2025-10-09 22:09:43,617 | INFO     | sum of deviations: 44956416.923810035
[2025-10-09 18:10:27] 2025-10-09 22:09:43,617 | INFO     | mean x: 1760043912.495238
[2025-10-09 18:10:27] 2025-10-09 22:09:43,617 | INFO     | mean y: 2182775.8476190474
[2025-10-09 18:10:27] 2025-10-09 22:09:43,617 | INFO     | -- intersect: -218301942.2453046
[2025-10-09 18:10:27] 2025-10-09 22:09:43,617 | INFO     | intersect: -218301942.2453046
[2025-10-09 18:10:27] 2025-10-09 22:09:43,618 | INFO     | chi2: 0.05008457088126289
[2025-10-09 18:10:27] 2025-10-09 22:09:43,618 | INFO     | -- intersect: -218301942.2453046
[2025-10-09 18:10:27] 2025-10-09 22:09:43,618 | INFO     | current memory leak: 0.13 B/s (using 105 data points, chi2=0.05)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,618 | INFO     | could have reported an average CPU frequency of 2626 MHz (8 samples)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,618 | INFO     | ..............................
[2025-10-09 18:10:27] 2025-10-09 22:09:43,618 | INFO     | . Timing measurements:
[2025-10-09 18:10:27] 2025-10-09 22:09:43,619 | INFO     | . get job = 0 s
[2025-10-09 18:10:27] 2025-10-09 22:09:43,619 | INFO     | . initial setup = 3 s
[2025-10-09 18:10:27] 2025-10-09 22:09:43,619 | INFO     | . payload setup = 13 s
[2025-10-09 18:10:27] 2025-10-09 22:09:43,619 | INFO     | . stage-in = 0 s
[2025-10-09 18:10:27] 2025-10-09 22:09:43,619 | INFO     | . payload execution = 8262 s
[2025-10-09 18:10:27] 2025-10-09 22:09:43,619 | INFO     | . stage-out = 1 s
[2025-10-09 18:10:27] 2025-10-09 22:09:43,619 | INFO     | . log creation = 0 s
[2025-10-09 18:10:27] 2025-10-09 22:09:43,619 | INFO     | ..............................
[2025-10-09 18:10:27] 2025-10-09 22:09:43,659 | INFO     | time since job start (8317s) is within the limit (172800.0s)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,724 | INFO     | 
[2025-10-09 18:10:27] 2025-10-09 22:09:43,724 | INFO     | job summary report
[2025-10-09 18:10:27] 2025-10-09 22:09:43,724 | INFO     | --------------------------------------------------
[2025-10-09 18:10:27] 2025-10-09 22:09:43,724 | INFO     | PanDA job id: 6837339830
[2025-10-09 18:10:27] 2025-10-09 22:09:43,724 | INFO     | task id: 46676269
[2025-10-09 18:10:27] 2025-10-09 22:09:43,724 | INFO     | errors: (none)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | pilot state: finished 
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | transexitcode: 0
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | exeerrorcode: 0
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | exeerrordiag: 
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | exitcode: 0
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | exitmsg: OK
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | cpuconsumptiontime: 42196 s
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | nevents: 400
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | neventsw: 0
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | pid: 3259441
[2025-10-09 18:10:27] 2025-10-09 22:09:43,725 | INFO     | pgrp: 3259441
[2025-10-09 18:10:27] 2025-10-09 22:09:43,726 | INFO     | corecount: 9
[2025-10-09 18:10:27] 2025-10-09 22:09:43,726 | INFO     | event service: False
[2025-10-09 18:10:27] 2025-10-09 22:09:43,726 | INFO     | sizes: {0: 2348627, 1: 2348882, 9: 2349144, 12: 2349172, 8280: 2376970, 8283: 2386180, 8293: 2386318}
[2025-10-09 18:10:27] 2025-10-09 22:09:43,726 | INFO     | --------------------------------------------------
[2025-10-09 18:10:27] 2025-10-09 22:09:43,726 | INFO     | 
[2025-10-09 18:10:27] 2025-10-09 22:09:43,726 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-09 18:10:27] 2025-10-09 22:09:43,769 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 18:10:27] 2025-10-09 22:09:43,771 | INFO     | job 6837339830 has completed (purged errors)
[2025-10-09 18:10:27] 2025-10-09 22:09:43,772 | INFO     | overall cleanup function is called
[2025-10-09 18:10:27] 2025-10-09 22:09:44,790 | INFO     | --- collectZombieJob: --- 10, [3259441]
[2025-10-09 18:10:27] 2025-10-09 22:09:44,790 | INFO     | zombie collector waiting for pid 3259441
[2025-10-09 18:10:27] 2025-10-09 22:09:44,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 18:10:27] 2025-10-09 22:09:44,790 | INFO     | collected zombie processes
[2025-10-09 18:10:27] 2025-10-09 22:09:44,790 | INFO     | will attempt to kill all subprocesses of pid=3259441
[2025-10-09 18:10:27] 2025-10-09 22:09:45,745 | INFO     | PID=3252476 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-09 18:10:27] 2025-10-09 22:09:45,746 | INFO     | .. there are 31 such processes running
[2025-10-09 18:10:27] 2025-10-09 22:09:45,753 | INFO     | process IDs to be killed: [3259441] (in reverse order)
[2025-10-09 18:10:27] 2025-10-09 22:09:45,895 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 18:10:27] 2025-10-09 22:09:45,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 18:10:27] 2025-10-09 22:09:45,919 | INFO     | did not find any defunct processes belonging to 3259441
[2025-10-09 18:10:27] 2025-10-09 22:09:45,935 | INFO     | did not find any defunct processes belonging to 3259441
[2025-10-09 18:10:27] 2025-10-09 22:09:45,936 | INFO     | ready for new job
[2025-10-09 18:10:27] 2025-10-09 22:09:45,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 18:10:27] 2025-10-09 22:09:45,937 | INFO     | ***************************************
[2025-10-09 18:10:27] 2025-10-09 22:09:45,938 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 18:10:27] 2025-10-09 22:09:45,938 | INFO     | ***************************************
[2025-10-09 18:10:27] 2025-10-09 22:09:45,938 | INFO     | 
[2025-10-09 18:10:27] 2025-10-09 22:09:45,943 | INFO     | architecture information:
[2025-10-09 18:10:27] 2025-10-09 22:09:45,943 | INFO     | executing command: cat /etc/os-release
[2025-10-09 18:10:27] 2025-10-09 22:09:45,966 | INFO     | cat /etc/os-release:
[2025-10-09 18:10:27] NAME="CentOS Linux"
[2025-10-09 18:10:27] VERSION="7 (Core)"
[2025-10-09 18:10:27] ID="centos"
[2025-10-09 18:10:27] ID_LIKE="rhel fedora"
[2025-10-09 18:10:27] VERSION_ID="7"
[2025-10-09 18:10:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 18:10:27] ANSI_COLOR="0;31"
[2025-10-09 18:10:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 18:10:27] HOME_URL="https://www.centos.org/"
[2025-10-09 18:10:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 18:10:27] 
[2025-10-09 18:10:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 18:10:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 18:10:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 18:10:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 18:10:27] 
[2025-10-09 18:10:27] 2025-10-09 22:09:45,966 | INFO     | ***************************************
[2025-10-09 18:10:27] 2025-10-09 22:09:46,469 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-09 18:10:27] 2025-10-09 22:09:46,486 | INFO     | sufficient remaining disk space (73523003392 B)
[2025-10-09 18:10:27] 2025-10-09 22:09:46,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 18:10:27] 2025-10-09 22:09:46,496 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 18:10:27] 2025-10-09 22:09:46,496 | INFO     | update_server=False
[2025-10-09 18:10:27] 2025-10-09 22:09:46,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 18:10:27] 2025-10-09 22:09:46,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 18:10:27] 2025-10-09 22:09:46,497 | INFO     | aborting loop
[2025-10-09 18:10:27] 2025-10-09 22:09:46,500 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-09 18:10:27] 2025-10-09 22:09:46,501 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 18:10:27] 2025-10-09 22:09:46,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 18:10:27] 2025-10-09 22:09:46,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 18:10:27] 2025-10-09 22:09:46,658 | INFO     | all payload control threads have been joined
[2025-10-09 18:10:27] 2025-10-09 22:09:46,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 18:10:27] 2025-10-09 22:09:47,122 | INFO     | all data control threads have been joined
[2025-10-09 18:10:27] 2025-10-09 22:09:47,215 | INFO     | all job control threads have been joined
[2025-10-09 18:10:27] 2025-10-09 22:09:47,502 | INFO     | [job] retrieve thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:47,503 | INFO     | [job] job monitor thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:47,664 | INFO     | [payload] control thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:47,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,104 | INFO     | [payload] validate_post thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,128 | INFO     | [data] control thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,222 | INFO     | [payload] failed_post thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,223 | INFO     | [job] control thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,268 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,470 | INFO     | [job] validate thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,530 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,561 | INFO     | [data] copytool_in thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,644 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,716 | INFO     | [data] copytool_out thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:48,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 18:10:27] 2025-10-09 22:09:49,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 18:10:27] 2025-10-09 22:09:49,747 | INFO     | [job] queue monitor thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:09:53,076 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 18:10:27] 2025-10-09 22:10:19,935 | INFO     | [monitor] cgroup control has ended
[2025-10-09 18:10:27] 2025-10-09 22:10:22,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649968256832)>', '<ExcThread(monitor, started 139649234228992)>']
[2025-10-09 18:10:27] 2025-10-09 22:10:22,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 18:10:27] 2025-10-09 22:10:22,741 | INFO     | [monitor] control thread has ended
[2025-10-09 18:10:27] 2025-10-09 22:10:27,038 | INFO     | all workflow threads have been joined
[2025-10-09 18:10:27] 2025-10-09 22:10:27,038 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 18:10:27] 2025-10-09 22:10:27,038 | INFO     | traces error code: 0
[2025-10-09 18:10:27] 2025-10-09 22:10:27,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 18:10:27] 2025-10-09 22:10:27,289 [wrapper] ==== pilot stdout END ====
[2025-10-09 18:10:27] 2025-10-09 22:10:27,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 18:10:27] 2025-10-09 22:10:27,307 [wrapper] pilotpid: 3252476
[2025-10-09 18:10:27] 2025-10-09 22:10:27,321 [wrapper] Pilot exit status: 0
[2025-10-09 18:10:27] 2025-10-09 22:10:27,346 [wrapper] pandaids: 6837339830
[2025-10-09 18:10:27] 2025-10-09 22:10:27,439 [wrapper] cleanup supervisor_pilot 3590426 3252477
[2025-10-09 18:10:27] 2025-10-09 22:10:27,443 [wrapper] Test setup, not cleaning
[2025-10-09 18:10:27] 2025-10-09 22:10:27,446 [wrapper] apfmon messages muted
[2025-10-09 18:10:27] 2025-10-09 22:10:27,449 [wrapper] ==== wrapper stdout END ====
[2025-10-09 18:10:27] 2025-10-09 22:10:27,452 [wrapper] ==== wrapper stderr END ====
[2025-10-09 18:10:27]  *** Error codes and diagnostics ***
[2025-10-09 18:10:27]     "exeErrorCode": 0,
[2025-10-09 18:10:27]     "exeErrorDiag": "",
[2025-10-09 18:10:27]     "pilotErrorCode": 0,
[2025-10-09 18:10:27]     "pilotErrorDiag": "",
[2025-10-09 18:10:27]  *** Listing of results directory ***
[2025-10-09 18:10:27] total 415036
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 08:53 pilot3.tar.gz
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 08:56 queuedata.json
[2025-10-09 18:10:27] -rwx------. 1 boincer umatlas     36292 Oct  9 08:57 runpilot2-wrapper.sh
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas       100 Oct  9 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 18:10:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 15:50 run_atlas
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas       105 Oct  9 15:50 job.xml
[2025-10-09 18:10:27] -rw-r--r--. 2 boincer umatlas 222625539 Oct  9 15:50 EVNT.46676267._000743.pool.root.1
[2025-10-09 18:10:27] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 15:50 start_atlas.sh
[2025-10-09 18:10:27] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 15:50 shared
[2025-10-09 18:10:27] -rw-r--r--. 2 boincer umatlas    569680 Oct  9 15:50 input.tar.gz
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas         0 Oct  9 15:50 boinc_lockfile
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas      2548 Oct  9 15:50 pandaJob.out
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas    975454 Oct  9 15:51 agis_schedconf.cvmfs.json
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas   1560401 Oct  9 15:51 agis_ddmendpoints.agis.ALL.json
[2025-10-09 18:10:27] drwx------. 5 boincer umatlas      4096 Oct  9 15:51 pilot3
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas      6856 Oct  9 18:04 init_data.xml
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas 195441715 Oct  9 18:08 HITS.46676269._017948.pool.root.1
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas       529 Oct  9 18:09 boinc_task_state.xml
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas      1041 Oct  9 18:09 memory_monitor_summary.json
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas    405087 Oct  9 18:09 log.46676269._017948.job.log.tgz.1
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas      7824 Oct  9 18:09 heartbeat.json
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas        95 Oct  9 18:09 pilot_heartbeat.json
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 18:10 boinc_mmap_file
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas        27 Oct  9 18:10 wrapper_checkpoint.txt
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas      4552 Oct  9 18:10 pilotlog.txt
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas   1106951 Oct  9 18:10 log.46676269._017948.job.log.1
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas       357 Oct  9 18:10 output.list
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas       620 Oct  9 18:10 runtime_log
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas   1536000 Oct  9 18:10 result.tar.gz
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas      8708 Oct  9 18:10 runtime_log.err
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas       653 Oct  9 18:10 dbTLDmxN5Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMzZNDmiKOhyn.diag
[2025-10-09 18:10:27] -rw-r--r--. 1 boincer umatlas     21031 Oct  9 18:10 stderr.txt
[2025-10-09 18:10:27] HITS file was successfully produced:
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas 195441715 Oct  9 18:08 shared/HITS.pool.root.1
[2025-10-09 18:10:27]  *** Contents of shared directory: ***
[2025-10-09 18:10:27] total 410356
[2025-10-09 18:10:27] -rw-r--r--. 2 boincer umatlas 222625539 Oct  9 15:50 ATLAS.root_0
[2025-10-09 18:10:27] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 15:50 start_atlas.sh
[2025-10-09 18:10:27] -rw-r--r--. 2 boincer umatlas    569680 Oct  9 15:50 input.tar.gz
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas 195441715 Oct  9 18:08 HITS.pool.root.1
[2025-10-09 18:10:27] -rw-------. 1 boincer umatlas   1536000 Oct  9 18:10 result.tar.gz
18:10:28 (3248694): run_atlas exited; CPU time 42522.144595
18:10:28 (3248694): called boinc_finish(0)

</stderr_txt>
]]>

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