Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:35:40 (17984): wrapper (7.7.26015): starting
15:35:40 (17984): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 15:35:40] Arguments: --nthreads 8
[2025-10-09 15:35:40] Threads: 8
[2025-10-09 15:35:40] Checking for CVMFS
[2025-10-09 15:35:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 15:35:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 15:35:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 15:35:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 15:35:41] 2.11.2.0 14729 48975 124964 151521 3 57 13888646 18432001 1833 130560 0 42529979 99.973 2134436 37926 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 15:35:41] CVMFS is ok
[2025-10-09 15:35:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 15:35:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 15:35:41] Further information can be found at the LHC@home message board.
[2025-10-09 15:35:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 15:35:41] Checking for apptainer binary...
[2025-10-09 15:35:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 15:35:41] Running /usr/bin/apptainer --version
[2025-10-09 15:35:41] apptainer version 1.3.2-1.el7
[2025-10-09 15:35:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 15:35:41] c-206-30.aglt2.org
[2025-10-09 15:35:41] apptainer works
[2025-10-09 15:35:41] Set ATHENA_PROC_NUMBER=8
[2025-10-09 15:35:41] Set ATHENA_CORE_NUMBER=8
[2025-10-09 15:35:41] Starting ATLAS job with PandaID=6837593922
[2025-10-09 15:35:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 18:19:16]  *** The last 200 lines of the pilot log: ***
[2025-10-09 18:19:16] 2025-10-09 22:18:43,681 | INFO     | chi2: 1.3838961494261772
[2025-10-09 18:19:16] 2025-10-09 22:18:43,681 | INFO     | sum of square deviations: 1154663510.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,682 | INFO     | sum of deviations: 9204717976.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,682 | INFO     | mean x: 1760043275.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,682 | INFO     | mean y: 2477128.4
[2025-10-09 18:19:16] 2025-10-09 22:18:43,683 | INFO     | -- intersect: -14028192267.163052
[2025-10-09 18:19:16] 2025-10-09 22:18:43,683 | INFO     | intersect: -14028192267.163052
[2025-10-09 18:19:16] 2025-10-09 22:18:43,683 | INFO     | chi2: 1.385172049994835
[2025-10-09 18:19:16] 2025-10-09 22:18:43,683 | INFO     | current chi2=1.385172049994835 (change=-0.09219626553530243 %)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,683 | INFO     | right removable region: 154
[2025-10-09 18:19:16] 2025-10-09 22:18:43,683 | INFO     | sum of square deviations: 1154663510.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,684 | INFO     | sum of deviations: -12743476816.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,684 | INFO     | mean x: 1760043580.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,684 | INFO     | mean y: 2506140.2838709676
[2025-10-09 18:19:16] 2025-10-09 22:18:43,684 | INFO     | -- intersect: 19427277394.101048
[2025-10-09 18:19:16] 2025-10-09 22:18:43,684 | INFO     | intersect: 19427277394.101048
[2025-10-09 18:19:16] 2025-10-09 22:18:43,685 | INFO     | chi2: 0.04549147578754852
[2025-10-09 18:19:16] 2025-10-09 22:18:43,685 | INFO     | current chi2=0.04549147578754852 (change=96.71279699662354 %)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,685 | INFO     | sum of square deviations: 1046484737.5
[2025-10-09 18:19:16] 2025-10-09 22:18:43,686 | INFO     | sum of deviations: -10916678248.5
[2025-10-09 18:19:16] 2025-10-09 22:18:43,686 | INFO     | mean x: 1760043732.5
[2025-10-09 18:19:16] 2025-10-09 22:18:43,686 | INFO     | mean y: 2503486.2466666666
[2025-10-09 18:19:16] 2025-10-09 22:18:43,686 | INFO     | -- intersect: 18362858341.38998
[2025-10-09 18:19:16] 2025-10-09 22:18:43,686 | INFO     | intersect: 18362858341.38998
[2025-10-09 18:19:16] 2025-10-09 22:18:43,686 | INFO     | chi2: 0.029189784849437447
[2025-10-09 18:19:16] 2025-10-09 22:18:43,686 | INFO     | current chi2=0.029189784849437447 (change=35.83460561763752 %)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,687 | INFO     | sum of square deviations: 945282840.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,687 | INFO     | sum of deviations: -8075819463.000001
[2025-10-09 18:19:16] 2025-10-09 22:18:43,687 | INFO     | mean x: 1760043885.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,688 | INFO     | mean y: 2499226.496551724
[2025-10-09 18:19:16] 2025-10-09 22:18:43,688 | INFO     | -- intersect: 15039053430.96845
[2025-10-09 18:19:16] 2025-10-09 22:18:43,688 | INFO     | intersect: 15039053430.96845
[2025-10-09 18:19:16] 2025-10-09 22:18:43,688 | INFO     | chi2: 0.021657104067713442
[2025-10-09 18:19:16] 2025-10-09 22:18:43,688 | INFO     | current chi2=0.021657104067713442 (change=25.80587976436961 %)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,688 | INFO     | sum of square deviations: 850825255.0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,689 | INFO     | sum of deviations: -5735267946.000003
[2025-10-09 18:19:16] 2025-10-09 22:18:43,689 | INFO     | mean x: 1760044037.5
[2025-10-09 18:19:16] 2025-10-09 22:18:43,689 | INFO     | mean y: 2495446.3285714285
[2025-10-09 18:19:16] 2025-10-09 22:18:43,689 | INFO     | -- intersect: 11866652148.896336
[2025-10-09 18:19:16] 2025-10-09 22:18:43,689 | INFO     | intersect: 11866652148.896336
[2025-10-09 18:19:16] 2025-10-09 22:18:43,690 | INFO     | chi2: 0.01739248526492597
[2025-10-09 18:19:16] 2025-10-09 22:18:43,690 | INFO     | current chi2=0.01739248526492597 (change=19.691546891281718 %)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,690 | INFO     | left removable region: 40
[2025-10-09 18:19:16] 2025-10-09 22:18:43,690 | INFO     | sum of square deviations: 459366752.5
[2025-10-09 18:19:16] 2025-10-09 22:18:43,690 | INFO     | sum of deviations: 722831913.5000004
[2025-10-09 18:19:16] 2025-10-09 22:18:43,691 | INFO     | mean x: 1760044464.5
[2025-10-09 18:19:16] 2025-10-09 22:18:43,691 | INFO     | mean y: 2483017.0789473685
[2025-10-09 18:19:16] 2025-10-09 22:18:43,691 | INFO     | -- intersect: -2767017172.466482
[2025-10-09 18:19:16] 2025-10-09 22:18:43,691 | INFO     | intersect: -2767017172.466482
[2025-10-09 18:19:16] 2025-10-09 22:18:43,691 | INFO     | chi2: 0.00014733462781265575
[2025-10-09 18:19:16] 2025-10-09 22:18:43,691 | INFO     | -- intersect: -2767017172.466482
[2025-10-09 18:19:16] 2025-10-09 22:18:43,691 | INFO     | current memory leak: 1.57 B/s (using 114 data points, chi2=0.00)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,692 | INFO     | could have reported an average CPU frequency of 2545 MHz (9 samples)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,692 | INFO     | ..............................
[2025-10-09 18:19:16] 2025-10-09 22:18:43,692 | INFO     | . Timing measurements:
[2025-10-09 18:19:16] 2025-10-09 22:18:43,692 | INFO     | . get job = 0 s
[2025-10-09 18:19:16] 2025-10-09 22:18:43,692 | INFO     | . initial setup = 2 s
[2025-10-09 18:19:16] 2025-10-09 22:18:43,692 | INFO     | . payload setup = 5 s
[2025-10-09 18:19:16] 2025-10-09 22:18:43,692 | INFO     | . stage-in = 0 s
[2025-10-09 18:19:16] 2025-10-09 22:18:43,692 | INFO     | . payload execution = 9738 s
[2025-10-09 18:19:16] 2025-10-09 22:18:43,693 | INFO     | . stage-out = 0 s
[2025-10-09 18:19:16] 2025-10-09 22:18:43,693 | INFO     | . log creation = 0 s
[2025-10-09 18:19:16] 2025-10-09 22:18:43,693 | INFO     | ..............................
[2025-10-09 18:19:16] 2025-10-09 22:18:43,784 | INFO     | 
[2025-10-09 18:19:16] 2025-10-09 22:18:43,784 | INFO     | job summary report
[2025-10-09 18:19:16] 2025-10-09 22:18:43,784 | INFO     | --------------------------------------------------
[2025-10-09 18:19:16] 2025-10-09 22:18:43,784 | INFO     | PanDA job id: 6837593922
[2025-10-09 18:19:16] 2025-10-09 22:18:43,784 | INFO     | task id: 46376905
[2025-10-09 18:19:16] 2025-10-09 22:18:43,785 | INFO     | errors: (none)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 18:19:16] 2025-10-09 22:18:43,785 | INFO     | pilot state: finished 
[2025-10-09 18:19:16] 2025-10-09 22:18:43,785 | INFO     | transexitcode: 0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,785 | INFO     | exeerrorcode: 0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,785 | INFO     | exeerrordiag: 
[2025-10-09 18:19:16] 2025-10-09 22:18:43,785 | INFO     | exitcode: 0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,785 | INFO     | exitmsg: OK
[2025-10-09 18:19:16] 2025-10-09 22:18:43,786 | INFO     | cpuconsumptiontime: 73256 s
[2025-10-09 18:19:16] 2025-10-09 22:18:43,786 | INFO     | nevents: 400
[2025-10-09 18:19:16] 2025-10-09 22:18:43,786 | INFO     | neventsw: 0
[2025-10-09 18:19:16] 2025-10-09 22:18:43,786 | INFO     | pid: 28325
[2025-10-09 18:19:16] 2025-10-09 22:18:43,786 | INFO     | pgrp: 28325
[2025-10-09 18:19:16] 2025-10-09 22:18:43,786 | INFO     | corecount: 8
[2025-10-09 18:19:16] 2025-10-09 22:18:43,786 | INFO     | event service: False
[2025-10-09 18:19:16] 2025-10-09 22:18:43,786 | INFO     | sizes: {0: 2348598, 1: 2348797, 5: 2349059, 12: 2349115, 9747: 2377519, 9748: 2377518, 9749: 2386756, 9756: 2386958}
[2025-10-09 18:19:16] 2025-10-09 22:18:43,787 | INFO     | --------------------------------------------------
[2025-10-09 18:19:16] 2025-10-09 22:18:43,787 | INFO     | 
[2025-10-09 18:19:16] 2025-10-09 22:18:43,787 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-09 18:19:16] 2025-10-09 22:18:43,804 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,804 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,804 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,805 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,805 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,805 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,805 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,807 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,807 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 18:19:16] 2025-10-09 22:18:43,808 | INFO     | job 6837593922 has completed (purged errors)
[2025-10-09 18:19:16] 2025-10-09 22:18:43,808 | INFO     | overall cleanup function is called
[2025-10-09 18:19:16] 2025-10-09 22:18:44,091 | INFO     | PID=21728 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 18:19:16] 2025-10-09 22:18:44,092 | INFO     | .. there are 3 such processes running
[2025-10-09 18:19:16] 2025-10-09 22:18:44,814 | INFO     | --- collectZombieJob: --- 10, [28325]
[2025-10-09 18:19:16] 2025-10-09 22:18:44,815 | INFO     | zombie collector waiting for pid 28325
[2025-10-09 18:19:16] 2025-10-09 22:18:44,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 18:19:16] 2025-10-09 22:18:44,815 | INFO     | collected zombie processes
[2025-10-09 18:19:16] 2025-10-09 22:18:44,815 | INFO     | will attempt to kill all subprocesses of pid=28325
[2025-10-09 18:19:16] 2025-10-09 22:18:44,977 | INFO     | process IDs to be killed: [28325] (in reverse order)
[2025-10-09 18:19:16] 2025-10-09 22:18:45,032 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 18:19:16] 2025-10-09 22:18:45,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 18:19:16] 2025-10-09 22:18:45,037 | INFO     | did not find any defunct processes belonging to 28325
[2025-10-09 18:19:16] 2025-10-09 22:18:45,041 | INFO     | did not find any defunct processes belonging to 28325
[2025-10-09 18:19:16] 2025-10-09 22:18:45,042 | INFO     | ready for new job
[2025-10-09 18:19:16] 2025-10-09 22:18:45,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 18:19:16] 2025-10-09 22:18:45,044 | INFO     | ***************************************
[2025-10-09 18:19:16] 2025-10-09 22:18:45,044 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 18:19:16] 2025-10-09 22:18:45,044 | INFO     | ***************************************
[2025-10-09 18:19:16] 2025-10-09 22:18:45,044 | INFO     | 
[2025-10-09 18:19:16] 2025-10-09 22:18:45,046 | INFO     | architecture information:
[2025-10-09 18:19:16] 2025-10-09 22:18:45,046 | INFO     | executing command: cat /etc/os-release
[2025-10-09 18:19:16] 2025-10-09 22:18:45,058 | INFO     | cat /etc/os-release:
[2025-10-09 18:19:16] NAME="CentOS Linux"
[2025-10-09 18:19:16] VERSION="7 (Core)"
[2025-10-09 18:19:16] ID="centos"
[2025-10-09 18:19:16] ID_LIKE="rhel fedora"
[2025-10-09 18:19:16] VERSION_ID="7"
[2025-10-09 18:19:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 18:19:16] ANSI_COLOR="0;31"
[2025-10-09 18:19:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 18:19:16] HOME_URL="https://www.centos.org/"
[2025-10-09 18:19:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 18:19:16] 
[2025-10-09 18:19:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 18:19:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 18:19:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 18:19:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 18:19:16] 
[2025-10-09 18:19:16] 2025-10-09 22:18:45,059 | INFO     | ***************************************
[2025-10-09 18:19:16] 2025-10-09 22:18:45,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-09 18:19:16] 2025-10-09 22:18:45,581 | INFO     | sufficient remaining disk space (27993833472 B)
[2025-10-09 18:19:16] 2025-10-09 22:18:45,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 18:19:16] 2025-10-09 22:18:45,582 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 18:19:16] 2025-10-09 22:18:45,582 | INFO     | update_server=False
[2025-10-09 18:19:16] 2025-10-09 22:18:45,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 18:19:16] 2025-10-09 22:18:45,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 18:19:16] 2025-10-09 22:18:45,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 18:19:16] 2025-10-09 22:18:45,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 18:19:16] 2025-10-09 22:18:45,583 | INFO     | aborting loop
[2025-10-09 18:19:16] 2025-10-09 22:18:45,640 | INFO     | all payload control threads have been joined
[2025-10-09 18:19:16] 2025-10-09 22:18:45,965 | INFO     | all data control threads have been joined
[2025-10-09 18:19:16] 2025-10-09 22:18:46,590 | INFO     | [job] retrieve thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:46,590 | INFO     | [job] queue monitor thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:46,591 | INFO     | [job] job monitor thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:46,615 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:46,624 | INFO     | all job control threads have been joined
[2025-10-09 18:19:16] 2025-10-09 22:18:46,647 | INFO     | [payload] control thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:46,915 | INFO     | [data] copytool_in thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:46,946 | INFO     | [job] validate thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:46,970 | INFO     | [data] control thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:47,255 | INFO     | [payload] failed_post thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:47,271 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:47,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:47,591 | INFO     | [data] copytool_out thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:47,612 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:47,630 | INFO     | [job] control thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:47,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 18:19:16] 2025-10-09 22:18:47,895 | INFO     | [payload] validate_post thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:18:51,851 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 18:19:16] 2025-10-09 22:19:07,761 | INFO     | [monitor] cgroup control has ended
[2025-10-09 18:19:16] 2025-10-09 22:19:09,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918614591296)>', '<ExcThread(monitor, started 139918307202816)>']
[2025-10-09 18:19:16] 2025-10-09 22:19:14,596 | INFO     | all workflow threads have been joined
[2025-10-09 18:19:16] 2025-10-09 22:19:14,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 18:19:16] 2025-10-09 22:19:14,597 | INFO     | traces error code: 0
[2025-10-09 18:19:16] 2025-10-09 22:19:14,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 18:19:16] 2025-10-09 22:19:16,356 | INFO     | PID=21728 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 18:19:16] 2025-10-09 22:19:16,356 | INFO     | .. there are 3 such processes running
[2025-10-09 18:19:16] 2025-10-09 22:19:16,357 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 18:19:16] 2025-10-09 22:19:16,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 18:19:16] 2025-10-09 22:19:16,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 18:19:16] 2025-10-09 22:19:16,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 18:19:16] 2025-10-09 22:19:16,358 | INFO     | [monitor] control thread has ended
[2025-10-09 18:19:16] 2025-10-09 22:19:16,487 [wrapper] ==== pilot stdout END ====
[2025-10-09 18:19:16] 2025-10-09 22:19:16,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 18:19:16] 2025-10-09 22:19:16,493 [wrapper] pilotpid: 21728
[2025-10-09 18:19:16] 2025-10-09 22:19:16,495 [wrapper] Pilot exit status: 0
[2025-10-09 18:19:16] 2025-10-09 22:19:16,504 [wrapper] pandaids: 6837593922
[2025-10-09 18:19:16] 2025-10-09 22:19:16,532 [wrapper] cleanup supervisor_pilot 12178 21729
[2025-10-09 18:19:16] 2025-10-09 22:19:16,534 [wrapper] Test setup, not cleaning
[2025-10-09 18:19:16] 2025-10-09 22:19:16,536 [wrapper] apfmon messages muted
[2025-10-09 18:19:16] 2025-10-09 22:19:16,540 [wrapper] ==== wrapper stdout END ====
[2025-10-09 18:19:16] 2025-10-09 22:19:16,574 [wrapper] ==== wrapper stderr END ====
[2025-10-09 18:19:16]  *** Error codes and diagnostics ***
[2025-10-09 18:19:16]     "exeErrorCode": 0,
[2025-10-09 18:19:16]     "exeErrorDiag": "",
[2025-10-09 18:19:16]     "pilotErrorCode": 0,
[2025-10-09 18:19:16]     "pilotErrorDiag": "",
[2025-10-09 18:19:16]  *** Listing of results directory ***
[2025-10-09 18:19:16] total 395320
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 09:21 pilot3.tar.gz
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 09:33 queuedata.json
[2025-10-09 18:19:16] -rwx------ 1 boincer umatlas     36292 Oct  9 09:33 runpilot2-wrapper.sh
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas       100 Oct  9 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 18:19:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 15:35 run_atlas
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas       105 Oct  9 15:35 job.xml
[2025-10-09 18:19:16] -rw-r--r-- 2 boincer umatlas 215790843 Oct  9 15:35 EVNT.46376901._004067.pool.root.1
[2025-10-09 18:19:16] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 15:35 start_atlas.sh
[2025-10-09 18:19:16] drwxrwx--x 2 boincer umatlas      4096 Oct  9 15:35 shared
[2025-10-09 18:19:16] -rw-r--r-- 2 boincer umatlas    569676 Oct  9 15:35 input.tar.gz
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas         0 Oct  9 15:35 boinc_lockfile
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas      2520 Oct  9 15:35 pandaJob.out
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas    975454 Oct  9 15:35 agis_schedconf.cvmfs.json
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas   1560401 Oct  9 15:35 agis_ddmendpoints.agis.ALL.json
[2025-10-09 18:19:16] drwx------ 5 boincer umatlas      4096 Oct  9 15:35 pilot3
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas      5951 Oct  9 18:10 init_data.xml
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas 181571300 Oct  9 18:18 HITS.46376905._136095.pool.root.1
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas       529 Oct  9 18:18 boinc_task_state.xml
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas      1053 Oct  9 18:18 memory_monitor_summary.json
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas    399066 Oct  9 18:18 log.46376905._136095.job.log.tgz.1
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas      7855 Oct  9 18:18 heartbeat.json
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 18:18 boinc_mmap_file
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas        27 Oct  9 18:18 wrapper_checkpoint.txt
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas        95 Oct  9 18:19 pilot_heartbeat.json
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas       820 Oct  9 18:19 pilotlog.txt
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas   1378536 Oct  9 18:19 log.46376905._136095.job.log.1
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas       357 Oct  9 18:19 output.list
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas       620 Oct  9 18:19 runtime_log
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas   1792000 Oct  9 18:19 result.tar.gz
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas      8703 Oct  9 18:19 runtime_log.err
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas       658 Oct  9 18:19 kjTKDmlw5Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmH0NMDmgnu5Bn.diag
[2025-10-09 18:19:16] -rw-r--r-- 1 boincer umatlas     21009 Oct  9 18:19 stderr.txt
[2025-10-09 18:19:16] HITS file was successfully produced:
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas 181571300 Oct  9 18:18 shared/HITS.pool.root.1
[2025-10-09 18:19:16]  *** Contents of shared directory: ***
[2025-10-09 18:19:16] total 390384
[2025-10-09 18:19:16] -rw-r--r-- 2 boincer umatlas 215790843 Oct  9 15:35 ATLAS.root_0
[2025-10-09 18:19:16] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 15:35 start_atlas.sh
[2025-10-09 18:19:16] -rw-r--r-- 2 boincer umatlas    569676 Oct  9 15:35 input.tar.gz
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas 181571300 Oct  9 18:18 HITS.pool.root.1
[2025-10-09 18:19:16] -rw------- 1 boincer umatlas   1792000 Oct  9 18:19 result.tar.gz
18:19:17 (17984): run_atlas exited; CPU time 73380.233629
18:19:17 (17984): called boinc_finish(0)

</stderr_txt>
]]>

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