Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:56:59 (21787): wrapper (7.7.26015): starting
15:56:59 (21787): wrapper: running run_atlas (--nthreads 11)
[2025-10-09 15:56:59] Arguments: --nthreads 11
[2025-10-09 15:56:59] Threads: 11
[2025-10-09 15:56:59] Checking for CVMFS
[2025-10-09 15:56:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 15:56:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 15:56:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 15:57:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 15:57:00] 2.13.2.0 132025 113414 485248 151521 3 196 24667308 40960001 8671 16776704 0 89436327 99.662 81030919 31242 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 15:57:00] CVMFS is ok
[2025-10-09 15:57:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 15:57:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 15:57:00] Further information can be found at the LHC@home message board.
[2025-10-09 15:57:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 15:57:00] Checking for apptainer binary...
[2025-10-09 15:57:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 15:57:00] Running /usr/bin/apptainer --version
[2025-10-09 15:57:00] apptainer version 1.4.3-1.el9
[2025-10-09 15:57:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 15:57:00] c-211-12.aglt2.org
[2025-10-09 15:57:00] apptainer works
[2025-10-09 15:57:01] Set ATHENA_PROC_NUMBER=11
[2025-10-09 15:57:01] Set ATHENA_CORE_NUMBER=11
[2025-10-09 15:57:01] Starting ATLAS job with PandaID=6826325849
[2025-10-09 15:57:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 19:42:58]  *** The last 200 lines of the pilot log: ***
[2025-10-09 19:42:58] 2025-10-09 23:41:52,823 | INFO     | mean y: 2654009.306976744
[2025-10-09 19:42:58] 2025-10-09 23:41:52,823 | INFO     | -- intersect: -6546809706.299852
[2025-10-09 19:42:58] 2025-10-09 23:41:52,823 | INFO     | intersect: -6546809706.299852
[2025-10-09 19:42:58] 2025-10-09 23:41:52,824 | INFO     | chi2: 0.07494806532611999
[2025-10-09 19:42:58] 2025-10-09 23:41:52,824 | INFO     | current chi2=0.07494806532611999 (change=95.84566561446762 %)
[2025-10-09 19:42:58] 2025-10-09 23:41:52,825 | INFO     | sum of square deviations: 2871671439.06666
[2025-10-09 19:42:58] 2025-10-09 23:41:52,826 | INFO     | sum of deviations: 4390699473.933332
[2025-10-09 19:42:58] 2025-10-09 23:41:52,826 | INFO     | mean x: 1760046889.9333334
[2025-10-09 19:42:58] 2025-10-09 23:41:52,826 | INFO     | mean y: 2659114.3523809523
[2025-10-09 19:42:58] 2025-10-09 23:41:52,826 | INFO     | -- intersect: -2688399775.1144304
[2025-10-09 19:42:58] 2025-10-09 23:41:52,827 | INFO     | intersect: -2688399775.1144304
[2025-10-09 19:42:58] 2025-10-09 23:41:52,827 | INFO     | chi2: 0.029260320117797722
[2025-10-09 19:42:58] 2025-10-09 23:41:52,827 | INFO     | current chi2=0.029260320117797722 (change=60.95920556390897 %)
[2025-10-09 19:42:58] 2025-10-09 23:41:52,828 | INFO     | sum of square deviations: 2671382848.487786
[2025-10-09 19:42:58] 2025-10-09 23:41:52,829 | INFO     | sum of deviations: 8333946828.682926
[2025-10-09 19:42:58] 2025-10-09 23:41:52,829 | INFO     | mean x: 1760047042.4390244
[2025-10-09 19:42:58] 2025-10-09 23:41:52,830 | INFO     | mean y: 2656106.2146341465
[2025-10-09 19:42:58] 2025-10-09 23:41:52,830 | INFO     | -- intersect: -5488184892.472918
[2025-10-09 19:42:58] 2025-10-09 23:41:52,830 | INFO     | intersect: -5488184892.472918
[2025-10-09 19:42:58] 2025-10-09 23:41:52,830 | INFO     | chi2: 0.01538876752967212
[2025-10-09 19:42:58] 2025-10-09 23:41:52,831 | INFO     | current chi2=0.01538876752967212 (change=47.40738492361253 %)
[2025-10-09 19:42:58] 2025-10-09 23:41:52,831 | INFO     | sum of square deviations: 2480629564.3950086
[2025-10-09 19:42:58] 2025-10-09 23:41:52,832 | INFO     | sum of deviations: 10572504327.82
[2025-10-09 19:42:58] 2025-10-09 23:41:52,832 | INFO     | mean x: 1760047194.945
[2025-10-09 19:42:58] 2025-10-09 23:41:52,833 | INFO     | mean y: 2654345.62
[2025-10-09 19:42:58] 2025-10-09 23:41:52,833 | INFO     | -- intersect: -7498710167.973437
[2025-10-09 19:42:58] 2025-10-09 23:41:52,833 | INFO     | intersect: -7498710167.973437
[2025-10-09 19:42:58] 2025-10-09 23:41:52,834 | INFO     | chi2: 0.0014386642813157874
[2025-10-09 19:42:58] 2025-10-09 23:41:52,834 | INFO     | current chi2=0.0014386642813157874 (change=90.65120531230455 %)
[2025-10-09 19:42:58] 2025-10-09 23:41:52,835 | INFO     | sum of square deviations: 2299202814.0718055
[2025-10-09 19:42:58] 2025-10-09 23:41:52,836 | INFO     | sum of deviations: 9751622959.815382
[2025-10-09 19:42:58] 2025-10-09 23:41:52,836 | INFO     | mean x: 1760047347.4410257
[2025-10-09 19:42:58] 2025-10-09 23:41:52,836 | INFO     | mean y: 2655033.7230769233
[2025-10-09 19:42:58] 2025-10-09 23:41:52,836 | INFO     | -- intersect: -7462244547.394106
[2025-10-09 19:42:58] 2025-10-09 23:41:52,837 | INFO     | intersect: -7462244547.394106
[2025-10-09 19:42:58] 2025-10-09 23:41:52,837 | INFO     | chi2: 0.0014075622819348964
[2025-10-09 19:42:58] 2025-10-09 23:41:52,838 | INFO     | current chi2=0.0014075622819348964 (change=2.161866377362575 %)
[2025-10-09 19:42:58] 2025-10-09 23:41:52,839 | INFO     | left removable region: 50
[2025-10-09 19:42:58] 2025-10-09 23:41:52,839 | INFO     | sum of square deviations: 1367677174.9939044
[2025-10-09 19:42:58] 2025-10-09 23:41:52,840 | INFO     | sum of deviations: 6478375054.884148
[2025-10-09 19:42:58] 2025-10-09 23:41:52,840 | INFO     | mean x: 1760047927.0060976
[2025-10-09 19:42:58] 2025-10-09 23:41:52,841 | INFO     | mean y: 2657192.1158536584
[2025-10-09 19:42:58] 2025-10-09 23:41:52,841 | INFO     | -- intersect: -8334288685.311455
[2025-10-09 19:42:58] 2025-10-09 23:41:52,841 | INFO     | intersect: -8334288685.311455
[2025-10-09 19:42:58] 2025-10-09 23:41:52,842 | INFO     | chi2: 0.0012868243832539704
[2025-10-09 19:42:58] 2025-10-09 23:41:52,842 | INFO     | -- intersect: -8334288685.311455
[2025-10-09 19:42:58] 2025-10-09 23:41:52,842 | INFO     | current memory leak: 4.74 B/s (using 164 data points, chi2=0.00)
[2025-10-09 19:42:58] 2025-10-09 23:41:52,843 | INFO     | could have reported an average CPU frequency of 2574 MHz (11 samples)
[2025-10-09 19:42:58] 2025-10-09 23:41:52,843 | INFO     | ..............................
[2025-10-09 19:42:58] 2025-10-09 23:41:52,844 | INFO     | . Timing measurements:
[2025-10-09 19:42:58] 2025-10-09 23:41:52,844 | INFO     | . get job = 0 s
[2025-10-09 19:42:58] 2025-10-09 23:41:52,844 | INFO     | . initial setup = 4 s
[2025-10-09 19:42:58] 2025-10-09 23:41:52,844 | INFO     | . payload setup = 14 s
[2025-10-09 19:42:58] 2025-10-09 23:41:52,845 | INFO     | . stage-in = 0 s
[2025-10-09 19:42:58] 2025-10-09 23:41:52,845 | INFO     | . payload execution = 13404 s
[2025-10-09 19:42:58] 2025-10-09 23:41:52,845 | INFO     | . stage-out = 2 s
[2025-10-09 19:42:58] 2025-10-09 23:41:52,845 | INFO     | . log creation = 0 s
[2025-10-09 19:42:58] 2025-10-09 23:41:52,846 | INFO     | ..............................
[2025-10-09 19:42:58] 2025-10-09 23:41:52,958 | INFO     | 
[2025-10-09 19:42:58] 2025-10-09 23:41:52,960 | INFO     | job summary report
[2025-10-09 19:42:58] 2025-10-09 23:41:52,961 | INFO     | --------------------------------------------------
[2025-10-09 19:42:58] 2025-10-09 23:41:52,961 | INFO     | PanDA job id: 6826325849
[2025-10-09 19:42:58] 2025-10-09 23:41:52,961 | INFO     | task id: 46373048
[2025-10-09 19:42:58] 2025-10-09 23:41:52,961 | INFO     | errors: (none)
[2025-10-09 19:42:58] 2025-10-09 23:41:52,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 19:42:58] 2025-10-09 23:41:52,961 | INFO     | pilot state: finished 
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | transexitcode: 0
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | exeerrorcode: 0
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | exeerrordiag: 
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | exitcode: 0
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | exitmsg: OK
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | cpuconsumptiontime: 70100 s
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | nevents: 400
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | neventsw: 0
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | pid: 33162
[2025-10-09 19:42:58] 2025-10-09 23:41:52,962 | INFO     | pgrp: 33162
[2025-10-09 19:42:58] 2025-10-09 23:41:52,963 | INFO     | corecount: 11
[2025-10-09 19:42:58] 2025-10-09 23:41:52,963 | INFO     | event service: False
[2025-10-09 19:42:58] 2025-10-09 23:41:52,963 | INFO     | sizes: {0: 2348841, 1: 2348841, 12: 2348869, 14: 2349159, 23: 2349187, 13422: 2379937, 13424: 2388935, 13425: 2388991, 13431: 2389213}
[2025-10-09 19:42:58] 2025-10-09 23:41:52,963 | INFO     | --------------------------------------------------
[2025-10-09 19:42:58] 2025-10-09 23:41:52,963 | INFO     | 
[2025-10-09 19:42:58] 2025-10-09 23:41:52,963 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-09 19:42:58] 2025-10-09 23:41:53,003 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,004 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 19:42:58] 2025-10-09 23:41:53,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 19:42:58] 2025-10-09 23:41:53,014 | INFO     | job 6826325849 has completed (purged errors)
[2025-10-09 19:42:58] 2025-10-09 23:41:53,014 | INFO     | overall cleanup function is called
[2025-10-09 19:42:58] 2025-10-09 23:41:53,276 | INFO     | PID=25512 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 19:42:58] 2025-10-09 23:41:53,277 | INFO     | .. there are 9 such processes running
[2025-10-09 19:42:58] 2025-10-09 23:41:53,422 | INFO     | number of running child processes to parent process 33162: 1
[2025-10-09 19:42:58] 2025-10-09 23:41:53,422 | INFO     | maximum number of monitored processes: 6
[2025-10-09 19:42:58] 2025-10-09 23:41:53,423 | INFO     | aborting job monitoring since job object (job id=6826325849) has expired
[2025-10-09 19:42:58] 2025-10-09 23:41:54,029 | INFO     | --- collectZombieJob: --- 10, [33162]
[2025-10-09 19:42:58] 2025-10-09 23:41:54,051 | INFO     | zombie collector waiting for pid 33162
[2025-10-09 19:42:58] 2025-10-09 23:41:54,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 19:42:58] 2025-10-09 23:41:54,052 | INFO     | collected zombie processes
[2025-10-09 19:42:58] 2025-10-09 23:41:54,052 | INFO     | will attempt to kill all subprocesses of pid=33162
[2025-10-09 19:42:58] 2025-10-09 23:41:54,353 | INFO     | process IDs to be killed: [33162] (in reverse order)
[2025-10-09 19:42:58] 2025-10-09 23:41:54,469 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 19:42:58] 2025-10-09 23:41:54,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 19:42:58] 2025-10-09 23:41:54,479 | INFO     | did not find any defunct processes belonging to 33162
[2025-10-09 19:42:58] 2025-10-09 23:41:54,488 | INFO     | did not find any defunct processes belonging to 33162
[2025-10-09 19:42:58] 2025-10-09 23:41:54,488 | INFO     | ready for new job
[2025-10-09 19:42:58] 2025-10-09 23:41:54,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 19:42:58] 2025-10-09 23:41:54,490 | INFO     | ***************************************
[2025-10-09 19:42:58] 2025-10-09 23:41:54,491 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 19:42:58] 2025-10-09 23:41:54,491 | INFO     | ***************************************
[2025-10-09 19:42:58] 2025-10-09 23:41:54,491 | INFO     | 
[2025-10-09 19:42:58] 2025-10-09 23:41:54,494 | INFO     | architecture information:
[2025-10-09 19:42:58] 2025-10-09 23:41:54,494 | INFO     | executing command: cat /etc/os-release
[2025-10-09 19:42:58] 2025-10-09 23:41:54,518 | INFO     | cat /etc/os-release:
[2025-10-09 19:42:58] NAME="CentOS Linux"
[2025-10-09 19:42:58] VERSION="7 (Core)"
[2025-10-09 19:42:58] ID="centos"
[2025-10-09 19:42:58] ID_LIKE="rhel fedora"
[2025-10-09 19:42:58] VERSION_ID="7"
[2025-10-09 19:42:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 19:42:58] ANSI_COLOR="0;31"
[2025-10-09 19:42:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 19:42:58] HOME_URL="https://www.centos.org/"
[2025-10-09 19:42:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 19:42:58] 
[2025-10-09 19:42:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 19:42:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 19:42:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 19:42:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 19:42:58] 
[2025-10-09 19:42:58] 2025-10-09 23:41:54,518 | INFO     | ***************************************
[2025-10-09 19:42:58] 2025-10-09 23:41:55,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-09 19:42:58] 2025-10-09 23:41:55,049 | INFO     | sufficient remaining disk space (63527976960 B)
[2025-10-09 19:42:58] 2025-10-09 23:41:55,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 19:42:58] 2025-10-09 23:41:55,056 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 19:42:58] 2025-10-09 23:41:55,057 | INFO     | update_server=False
[2025-10-09 19:42:58] 2025-10-09 23:41:55,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 19:42:58] 2025-10-09 23:41:55,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 19:42:58] 2025-10-09 23:41:55,057 | INFO     | aborting loop
[2025-10-09 19:42:58] 2025-10-09 23:41:55,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 19:42:58] 2025-10-09 23:41:55,439 | INFO     | all data control threads have been joined
[2025-10-09 19:42:58] 2025-10-09 23:41:55,525 | INFO     | all job control threads have been joined
[2025-10-09 19:42:58] 2025-10-09 23:41:55,596 | INFO     | all payload control threads have been joined
[2025-10-09 19:42:58] 2025-10-09 23:41:56,066 | INFO     | [job] retrieve thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:56,068 | INFO     | [job] job monitor thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:56,445 | INFO     | [data] control thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:56,460 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:56,489 | INFO     | [payload] validate_post thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:56,530 | INFO     | [job] control thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:56,599 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:56,605 | INFO     | [payload] control thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:56,668 | INFO     | [payload] failed_post thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:57,064 | INFO     | [data] copytool_out thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:57,134 | INFO     | [data] copytool_in thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:57,156 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:57,421 | INFO     | [job] validate thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:41:57,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 19:42:58] 2025-10-09 23:41:58,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 19:42:58] 2025-10-09 23:41:58,979 | INFO     | [job] queue monitor thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:42:02,161 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:42:05,699 | INFO     | job.realtimelogging is not enabled
[2025-10-09 19:42:58] 2025-10-09 23:42:06,704 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 19:42:58] 2025-10-09 23:42:23,725 [wrapper] supervise_pilot (15 min periods counter: 16)
[2025-10-09 19:42:58] 2025-10-09 23:42:25,692 | INFO     | PID=25512 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 19:42:58] 2025-10-09 23:42:25,692 | INFO     | .. there are 9 such processes running
[2025-10-09 19:42:58] 2025-10-09 23:42:25,693 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 19:42:58] 2025-10-09 23:42:25,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 19:42:58] 2025-10-09 23:42:25,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 19:42:58] 2025-10-09 23:42:51,779 | INFO     | [monitor] cgroup control has ended
[2025-10-09 19:42:58] 2025-10-09 23:42:52,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269579495232)>', '<ExcThread(monitor, started 140269219452672)>']
[2025-10-09 19:42:58] 2025-10-09 23:42:52,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 19:42:58] 2025-10-09 23:42:52,845 | INFO     | [monitor] control thread has ended
[2025-10-09 19:42:58] 2025-10-09 23:42:57,828 | INFO     | all workflow threads have been joined
[2025-10-09 19:42:58] 2025-10-09 23:42:57,828 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 19:42:58] 2025-10-09 23:42:57,829 | INFO     | traces error code: 0
[2025-10-09 19:42:58] 2025-10-09 23:42:57,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 19:42:58] 2025-10-09 23:42:57,966 [wrapper] ==== pilot stdout END ====
[2025-10-09 19:42:58] 2025-10-09 23:42:57,980 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 19:42:58] 2025-10-09 23:42:57,997 [wrapper] pilotpid: 25512
[2025-10-09 19:42:58] 2025-10-09 23:42:58,000 [wrapper] Pilot exit status: 0
[2025-10-09 19:42:58] 2025-10-09 23:42:58,021 [wrapper] pandaids: 6826325849
[2025-10-09 19:42:58] 2025-10-09 23:42:58,080 [wrapper] cleanup supervisor_pilot  342324 25513
[2025-10-09 19:42:58] 2025-10-09 23:42:58,084 [wrapper] Test setup, not cleaning
[2025-10-09 19:42:58] 2025-10-09 23:42:58,087 [wrapper] apfmon messages muted
[2025-10-09 19:42:58] 2025-10-09 23:42:58,090 [wrapper] ==== wrapper stdout END ====
[2025-10-09 19:42:58] 2025-10-09 23:42:58,095 [wrapper] ==== wrapper stderr END ====
[2025-10-09 19:42:58]  *** Error codes and diagnostics ***
[2025-10-09 19:42:58]     "exeErrorCode": 0,
[2025-10-09 19:42:58]     "exeErrorDiag": "",
[2025-10-09 19:42:58]     "pilotErrorCode": 0,
[2025-10-09 19:42:58]     "pilotErrorDiag": "",
[2025-10-09 19:42:58]  *** Listing of results directory ***
[2025-10-09 19:42:58] total 418136
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas    552446 Sep 30 23:43 pilot3.tar.gz
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas      5112 Oct  1 00:15 queuedata.json
[2025-10-09 19:42:58] -rwx------. 1 boincer umatlas     36292 Oct  1 00:18 runpilot2-wrapper.sh
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas       100 Oct  9 15:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 19:42:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 15:56 run_atlas
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas       105 Oct  9 15:56 job.xml
[2025-10-09 19:42:58] -rw-r--r--. 2 boincer umatlas 223233028 Oct  9 15:56 EVNT.46373045._002566.pool.root.1
[2025-10-09 19:42:58] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 15:56 start_atlas.sh
[2025-10-09 19:42:58] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 15:56 shared
[2025-10-09 19:42:58] -rw-r--r--. 2 boincer umatlas    565606 Oct  9 15:56 input.tar.gz
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas         0 Oct  9 15:56 boinc_lockfile
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas      2538 Oct  9 15:57 pandaJob.out
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas    975454 Oct  9 15:57 agis_schedconf.cvmfs.json
[2025-10-09 19:42:58] drwx------. 4 boincer umatlas      4096 Oct  9 15:57 pilot3
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas      6613 Oct  9 19:36 init_data.xml
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas 196497372 Oct  9 19:41 HITS.46373048._076888.pool.root.1
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas       530 Oct  9 19:41 boinc_task_state.xml
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas        95 Oct  9 19:41 pilot_heartbeat.json
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas      1039 Oct  9 19:41 memory_monitor_summary.json
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas   1560580 Oct  9 19:41 agis_ddmendpoints.agis.ALL.json
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas    489479 Oct  9 19:41 log.46373048._076888.job.log.tgz.1
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas      7828 Oct  9 19:41 heartbeat.json
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 19:42 boinc_mmap_file
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas      4893 Oct  9 19:42 pilotlog.txt
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas   1789388 Oct  9 19:42 log.46373048._076888.job.log.1
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas        27 Oct  9 19:42 wrapper_checkpoint.txt
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas       357 Oct  9 19:42 output.list
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas       620 Oct  9 19:42 runtime_log
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas   2293760 Oct  9 19:42 result.tar.gz
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas       656 Oct  9 19:42 ZdBMDmrT3N8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmc3ANDmJnb9Pm.diag
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas      8706 Oct  9 19:42 runtime_log.err
[2025-10-09 19:42:58] -rw-r--r--. 1 boincer umatlas     21218 Oct  9 19:42 stderr.txt
[2025-10-09 19:42:58] HITS file was successfully produced:
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas 196497372 Oct  9 19:41 shared/HITS.pool.root.1
[2025-10-09 19:42:58]  *** Contents of shared directory: ***
[2025-10-09 19:42:58] total 412712
[2025-10-09 19:42:58] -rw-r--r--. 2 boincer umatlas 223233028 Oct  9 15:56 ATLAS.root_0
[2025-10-09 19:42:58] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 15:56 start_atlas.sh
[2025-10-09 19:42:58] -rw-r--r--. 2 boincer umatlas    565606 Oct  9 15:56 input.tar.gz
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas 196497372 Oct  9 19:41 HITS.pool.root.1
[2025-10-09 19:42:58] -rw-------. 1 boincer umatlas   2293760 Oct  9 19:42 result.tar.gz
19:43:00 (21787): run_atlas exited; CPU time 70374.156735
19:43:00 (21787): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN