Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:48:00 (3032833): wrapper (7.7.26015): starting
12:48:00 (3032833): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 12:48:00] Arguments: --nthreads 12
[2025-10-09 12:48:00] Threads: 12
[2025-10-09 12:48:00] Checking for CVMFS
[2025-10-09 12:48:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 12:48:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 12:48:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 12:48:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 12:48:01] 2.11.5.0 2444 27577 224520 151521 1 728 30878122 45568000 20142 130560 0 296084727 99.865 118202752 26000 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 12:48:01] CVMFS is ok
[2025-10-09 12:48:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 12:48:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 12:48:01] Further information can be found at the LHC@home message board.
[2025-10-09 12:48:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 12:48:01] Checking for apptainer binary...
[2025-10-09 12:48:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 12:48:01] Running /usr/bin/apptainer --version
[2025-10-09 12:48:02] apptainer version 1.4.1-1.el9
[2025-10-09 12:48:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 12:48:02] wns0063.triumf.lcg
[2025-10-09 12:48:02] apptainer works
[2025-10-09 12:48:02] Set ATHENA_PROC_NUMBER=12
[2025-10-09 12:48:02] Set ATHENA_CORE_NUMBER=12
[2025-10-09 12:48:02] Starting ATLAS job with PandaID=6837354081
[2025-10-09 12:48:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 12:52:29]  *** The last 200 lines of the pilot log: ***
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | WARNING  | wrong length of table data, x=[1760039350.0], y=[1285.0] (must be same and length>=4)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | INFO     | could have reported an average CPU frequency of 2642 MHz (4 samples)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | INFO     | ..............................
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . Timing measurements:
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . get job = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . initial setup = 3 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . payload setup = 16 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . stage-in = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . payload execution = 33 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . stage-out = 1 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . log creation = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | ..............................
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 12:52:29] 2025-10-09 19:51:44,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837354081/pilotlog.txt
[2025-10-09 12:52:29] 2025-10-09 19:51:44,194 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 12:52:29] - Log from pilotlog.txt -
[2025-10-09 12:52:29] 2025-10-09 19:51:44,144 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837354081/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | INFO     | extracted standard info from prmon json
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | WARNING  | wrong length of table data, x=[1760039350.0], y=[1285.0] (must be same and length>=4)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | INFO     | could have reported an average CPU frequency of 2642 MHz (4 samples)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | INFO     | ..............................
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . Timing measurements:
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . get job = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . initial setup = 3 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . payload setup = 16 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . stage-in = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . payload execution = 33 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . stage-out = 1 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . log creation = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | ..............................
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 12:52:29] 2025-10-09 19:51:44,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837354081/pilotlog.txt
[2025-10-09 12:52:29] 2025-10-09 19:51:44,194 | WARNING  | 
[2025-10-09 12:52:29] [begin log extracts]
[2025-10-09 12:52:29] - Log from pilotlog.txt -
[2025-10-09 12:52:29] 2025-10-09 19:51:44,144 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837354081/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | INFO     | extracted standard info from prmon json
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 12:52:29] 2025-10-09 19:51:44,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | WARNING  | wrong length of table data, x=[1760039350.0], y=[1285.0] (must be same and length>=4)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | INFO     | could have reported an average CPU frequency of 2642 MHz (4 samples)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,146 | INFO     | ..............................
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . Timing measurements:
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . get job = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . initial setup = 3 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . payload setup = 16 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . stage-in = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . payload execution = 33 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . stage-out = 1 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | . log creation = 0 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | ..............................
[2025-10-09 12:52:29] 2025-10-09 19:51:44,165 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 12:52:29] 2025-10-09 19:51:44,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837354081/pilotlog.txt
[2025-10-09 12:52:29] [end log extracts]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,195 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,195 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | 
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | job summary report
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | --------------------------------------------------
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | PanDA job id: 6837354081
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | task id: 46676269
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 12:49:28,331 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | pilot state: failed 
[2025-10-09 12:52:29] 2025-10-09 19:51:44,323 | INFO     | transexitcode: 65
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | exeerrorcode: 65
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | exitcode: 65
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | cpuconsumptiontime: 18 s
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | nevents: 0
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | neventsw: 0
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | pid: 3043429
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | pgrp: 3043429
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | corecount: 12
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | event service: False
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | sizes: {0: 2348850, 11: 2349140, 54: 2372512, 57: 2376804, 58: 2376892, 181: 2377058}
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | --------------------------------------------------
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | 
[2025-10-09 12:52:29] 2025-10-09 19:51:44,324 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 12:52:29] 2025-10-09 19:51:44,343 | INFO     | time since job start (203s) is within the limit (172800.0s)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 12:52:29] 2025-10-09 19:51:44,414 | INFO     | job 6837354081 has completed (purged errors)
[2025-10-09 12:52:29] 2025-10-09 19:51:44,415 | INFO     | overall cleanup function is called
[2025-10-09 12:52:29] 2025-10-09 19:51:45,421 | INFO     | --- collectZombieJob: --- 10, [3043429]
[2025-10-09 12:52:29] 2025-10-09 19:51:45,421 | INFO     | zombie collector waiting for pid 3043429
[2025-10-09 12:52:29] 2025-10-09 19:51:45,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 12:52:29] 2025-10-09 19:51:45,421 | INFO     | collected zombie processes
[2025-10-09 12:52:29] 2025-10-09 19:51:45,421 | INFO     | will attempt to kill all subprocesses of pid=3043429
[2025-10-09 12:52:29] 2025-10-09 19:51:45,977 | INFO     | process IDs to be killed: [3043429] (in reverse order)
[2025-10-09 12:52:29] 2025-10-09 19:51:45,999 | INFO     | PID=3036734 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 12:52:29] 2025-10-09 19:51:45,999 | INFO     | .. there are 35 such processes running
[2025-10-09 12:52:29] 2025-10-09 19:51:46,068 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 12:52:29] 2025-10-09 19:51:46,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 12:52:29] 2025-10-09 19:51:46,085 | INFO     | did not find any defunct processes belonging to 3043429
[2025-10-09 12:52:29] 2025-10-09 19:51:46,094 | INFO     | did not find any defunct processes belonging to 3043429
[2025-10-09 12:52:29] 2025-10-09 19:51:46,094 | INFO     | ready for new job
[2025-10-09 12:52:29] 2025-10-09 19:51:46,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 12:52:29] 2025-10-09 19:51:46,096 | INFO     | ***************************************
[2025-10-09 12:52:29] 2025-10-09 19:51:46,096 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 12:52:29] 2025-10-09 19:51:46,096 | INFO     | ***************************************
[2025-10-09 12:52:29] 2025-10-09 19:51:46,096 | INFO     | 
[2025-10-09 12:52:29] 2025-10-09 19:51:46,098 | INFO     | architecture information:
[2025-10-09 12:52:29] 2025-10-09 19:51:46,098 | INFO     | executing command: cat /etc/os-release
[2025-10-09 12:52:29] 2025-10-09 19:51:46,115 | INFO     | cat /etc/os-release:
[2025-10-09 12:52:29] NAME="CentOS Linux"
[2025-10-09 12:52:29] VERSION="7 (Core)"
[2025-10-09 12:52:29] ID="centos"
[2025-10-09 12:52:29] ID_LIKE="rhel fedora"
[2025-10-09 12:52:29] VERSION_ID="7"
[2025-10-09 12:52:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 12:52:29] ANSI_COLOR="0;31"
[2025-10-09 12:52:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 12:52:29] HOME_URL="https://www.centos.org/"
[2025-10-09 12:52:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 12:52:29] 
[2025-10-09 12:52:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 12:52:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 12:52:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 12:52:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 12:52:29] 
[2025-10-09 12:52:29] 2025-10-09 19:51:46,116 | INFO     | ***************************************
[2025-10-09 12:52:29] 2025-10-09 19:51:46,620 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 12:52:29] 2025-10-09 19:51:46,634 | INFO     | sufficient remaining disk space (1514211901440 B)
[2025-10-09 12:52:29] 2025-10-09 19:51:46,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 12:52:29] 2025-10-09 19:51:46,635 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 12:52:29] 2025-10-09 19:51:46,635 | INFO     | update_server=False
[2025-10-09 12:52:29] 2025-10-09 19:51:46,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 12:52:29] 2025-10-09 19:51:46,635 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-09 12:52:29] 2025-10-09 19:51:46,637 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 12:52:29] 2025-10-09 19:51:46,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 12:52:29] 2025-10-09 19:51:46,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 12:52:29] 2025-10-09 19:51:46,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 12:52:29] 2025-10-09 19:51:46,637 | INFO     | aborting loop
[2025-10-09 12:52:29] 2025-10-09 19:51:46,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 12:52:29] 2025-10-09 19:51:47,085 | INFO     | all data control threads have been joined
[2025-10-09 12:52:29] 2025-10-09 19:51:47,329 | INFO     | all payload control threads have been joined
[2025-10-09 12:52:29] 2025-10-09 19:51:47,507 | INFO     | all job control threads have been joined
[2025-10-09 12:52:29] 2025-10-09 19:51:47,641 | INFO     | [job] retrieve thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:47,643 | INFO     | [job] job monitor thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:47,744 | INFO     | [job] validate thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:47,956 | INFO     | [payload] failed_post thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:47,974 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:47,981 | INFO     | [data] copytool_in thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:48,018 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:48,027 | INFO     | [payload] validate_post thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:48,092 | INFO     | [data] control thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:48,335 | INFO     | [payload] control thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:48,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 12:52:29] 2025-10-09 19:51:48,513 | INFO     | [job] control thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:48,651 | INFO     | [data] copytool_out thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:48,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:48,724 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:49,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 12:52:29] 2025-10-09 19:51:50,374 | INFO     | [job] queue monitor thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:51:52,461 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 12:52:29] 2025-10-09 19:52:21,505 | INFO     | [monitor] cgroup control has ended
[2025-10-09 12:52:29] 2025-10-09 19:52:22,841 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082199058240)>', '<ExcThread(monitor, started 140081792788224)>']
[2025-10-09 12:52:29] 2025-10-09 19:52:22,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 12:52:29] 2025-10-09 19:52:22,866 | INFO     | [monitor] control thread has ended
[2025-10-09 12:52:29] 2025-10-09 19:52:27,868 | INFO     | all workflow threads have been joined
[2025-10-09 12:52:29] 2025-10-09 19:52:27,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 12:52:29] 2025-10-09 19:52:27,868 | INFO     | traces error code: 0
[2025-10-09 12:52:29] 2025-10-09 19:52:27,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 12:52:29] 2025-10-09 19:52:28,413 [wrapper] ==== pilot stdout END ====
[2025-10-09 12:52:29] 2025-10-09 19:52:28,415 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 12:52:29] 2025-10-09 19:52:28,417 [wrapper] pilotpid: 3036734
[2025-10-09 12:52:29] 2025-10-09 19:52:28,419 [wrapper] Pilot exit status: 0
[2025-10-09 12:52:29] 2025-10-09 19:52:28,440 [wrapper] pandaids: 6837354081
[2025-10-09 12:52:29] 2025-10-09 19:52:28,527 [wrapper] cleanup supervisor_pilot 3036740 3036735
[2025-10-09 12:52:29] 2025-10-09 19:52:28,543 [wrapper] Test setup, not cleaning
[2025-10-09 12:52:29] 2025-10-09 19:52:28,546 [wrapper] apfmon messages muted
[2025-10-09 12:52:29] 2025-10-09 19:52:28,572 [wrapper] ==== wrapper stdout END ====
[2025-10-09 12:52:29] 2025-10-09 19:52:28,581 [wrapper] ==== wrapper stderr END ====
[2025-10-09 12:52:29]  *** Error codes and diagnostics ***
[2025-10-09 12:52:29]     "exeErrorCode": 65,
[2025-10-09 12:52:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 12:52:29]     "pilotErrorCode": 1305,
[2025-10-09 12:52:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 12:52:29]  *** Listing of results directory ***
[2025-10-09 12:52:29] total 220012
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc    557409 Oct  9 10:04 pilot3.tar.gz
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc      5112 Oct  9 10:09 queuedata.json
[2025-10-09 12:52:29] -rwx------. 1 boinc boinc     36292 Oct  9 10:10 runpilot2-wrapper.sh
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc       100 Oct  9 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 12:52:29] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 12:48 run_atlas
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc       105 Oct  9 12:48 job.xml
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc      6594 Oct  9 12:48 init_data.xml
[2025-10-09 12:52:29] -rw-r--r--. 2 boinc boinc 221165982 Oct  9 12:48 EVNT.46676267._000949.pool.root.1
[2025-10-09 12:52:29] -rw-r--r--. 2 boinc boinc     15120 Oct  9 12:48 start_atlas.sh
[2025-10-09 12:52:29] drwxrwx--x. 2 boinc boinc      4096 Oct  9 12:48 shared
[2025-10-09 12:52:29] -rw-r--r--. 2 boinc boinc    569677 Oct  9 12:48 input.tar.gz
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc         0 Oct  9 12:48 boinc_lockfile
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc      2548 Oct  9 12:48 pandaJob.out
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc    975454 Oct  9 12:48 agis_schedconf.cvmfs.json
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc   1560401 Oct  9 12:48 agis_ddmendpoints.agis.ALL.json
[2025-10-09 12:52:29] drwx------. 5 boinc boinc      4096 Oct  9 12:48 pilot3
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc       523 Oct  9 12:49 boinc_task_state.xml
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc       989 Oct  9 12:49 memory_monitor_summary.json
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc     21355 Oct  9 12:49 log.46676269._023105.job.log.tgz.1
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc        95 Oct  9 12:51 pilot_heartbeat.json
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc      8435 Oct  9 12:51 heartbeat.json
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc      8192 Oct  9 12:52 boinc_mmap_file
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc      4551 Oct  9 12:52 pilotlog.txt
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc        22 Oct  9 12:52 wrapper_checkpoint.txt
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc     88042 Oct  9 12:52 log.46676269._023105.job.log.1
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc       188 Oct  9 12:52 output.list
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc       620 Oct  9 12:52 runtime_log
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc    133120 Oct  9 12:52 result.tar.gz
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc      8528 Oct  9 12:52 runtime_log.err
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc       645 Oct  9 12:52 nSwMDm9K9Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEOOMDmT6YEvn.diag
[2025-10-09 12:52:29] -rw-r--r--. 1 boinc boinc     21829 Oct  9 12:52 stderr.txt
[2025-10-09 12:52:29] No HITS result produced
[2025-10-09 12:52:29]  *** Contents of shared directory: ***
[2025-10-09 12:52:29] total 216696
[2025-10-09 12:52:29] -rw-r--r--. 2 boinc boinc 221165982 Oct  9 12:48 ATLAS.root_0
[2025-10-09 12:52:29] -rw-r--r--. 2 boinc boinc     15120 Oct  9 12:48 start_atlas.sh
[2025-10-09 12:52:29] -rw-r--r--. 2 boinc boinc    569677 Oct  9 12:48 input.tar.gz
[2025-10-09 12:52:29] -rw-------. 1 boinc boinc    133120 Oct  9 12:52 result.tar.gz
12:52:31 (3032833): run_atlas exited; CPU time 25.375780
12:52:31 (3032833): called boinc_finish(0)

</stderr_txt>
]]>

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