Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:08:40 (3895009): wrapper (7.7.26015): starting
14:08:40 (3895009): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 14:08:40] Arguments: --nthreads 12
[2025-10-10 14:08:40] Threads: 12
[2025-10-10 14:08:40] Checking for CVMFS
[2025-10-10 14:08:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 14:08:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 14:08:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 14:08:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 14:08:41] 2.13.2.0 9461 12932 91004 151545 0 57 6216166 46080001 922 130560 0 30282487 99.996 468911 24050 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-10 14:08:41] CVMFS is ok
[2025-10-10 14:08:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 14:08:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 14:08:41] Further information can be found at the LHC@home message board.
[2025-10-10 14:08:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 14:08:41] Checking for apptainer binary...
[2025-10-10 14:08:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 14:08:41] Running /usr/bin/apptainer --version
[2025-10-10 14:08:41] apptainer version 1.4.2-1.el9
[2025-10-10 14:08:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 14:08:41] minis01.farm.particle.cz
[2025-10-10 14:08:41] apptainer works
[2025-10-10 14:08:41] Set ATHENA_PROC_NUMBER=12
[2025-10-10 14:08:41] Set ATHENA_CORE_NUMBER=12
[2025-10-10 14:08:41] Starting ATLAS job with PandaID=6837343919
[2025-10-10 14:08:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 15:02:00]  *** The last 200 lines of the pilot log: ***
[2025-10-10 15:02:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 15:02:00]  replicas=None
[2025-10-10 15:02:00]  scope=mc23_13p6TeV
[2025-10-10 15:02:00]  status=None
[2025-10-10 15:02:00]  status_code=0
[2025-10-10 15:02:00]  storage_token=
[2025-10-10 15:02:00]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6837343919/log.46676269._018693.job.log.tgz.1
[2025-10-10 15:02:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/a8/log.46676269._018693.job.log.tgz.1
[2025-10-10 15:02:00]  workdir=None
[2025-10-10 15:02:00] ]
[2025-10-10 15:02:00] 2025-10-10 13:01:33,143 | INFO     | transferring file log.46676269._018693.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6837343919/log.46676269._018693.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-10 15:02:00] 2025-10-10 13:01:33,143 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6837343919/log.46676269._018693.job.log.tgz.1 /var/lib/boinc/slots/4/log.46676269._018693.job
[2025-10-10 15:02:00] 2025-10-10 13:01:33,160 | INFO     | adding to output.list: log.46676269._018693.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/a8/log.46676269._018693.job.log.tg
[2025-10-10 15:02:00] 2025-10-10 13:01:33,160 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 15:02:00] 2025-10-10 13:01:33,160 | INFO     | summary of transferred files:
[2025-10-10 15:02:00] 2025-10-10 13:01:33,160 | INFO     |  -- lfn=log.46676269._018693.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 15:02:00] 2025-10-10 13:01:33,161 | INFO     | stage-out finished correctly
[2025-10-10 15:02:00] 2025-10-10 13:01:33,328 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 15:02:00] 2025-10-10 13:01:33,407 | INFO     | job 6837343919 has state=finished
[2025-10-10 15:02:00] 2025-10-10 13:01:33,407 | INFO     | preparing for final server update for job 6837343919 in state='finished'
[2025-10-10 15:02:00] 2025-10-10 13:01:33,408 | INFO     | this job has now completed (state=finished)
[2025-10-10 15:02:00] 2025-10-10 13:01:33,408 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 15:02:00] 2025-10-10 13:01:33,408 | INFO     | log transfer has been attempted: DONE
[2025-10-10 15:02:00] 2025-10-10 13:01:33,408 | INFO     | job 6837343919 has finished - writing final server update
[2025-10-10 15:02:00] 2025-10-10 13:01:33,409 | INFO     | total number of processed events: 400 (read)
[2025-10-10 15:02:00] 2025-10-10 13:01:33,409 | INFO     | executing command: lscpu
[2025-10-10 15:02:00] 2025-10-10 13:01:33,441 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 15:02:00] 2025-10-10 13:01:34,764 | INFO     | time since job start (3165s) is within the limit (172800.0s)
[2025-10-10 15:02:00] 2025-10-10 13:01:34,764 | INFO     | 3166s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-10 15:02:00] 2025-10-10 13:01:35,984 | WARNING  | process 3905611 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 15:02:00] 2025-10-10 13:01:35,985 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6837343919/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:02:00] 2025-10-10 13:01:36,131 | INFO     | number of running child processes to parent process 3905611: 1
[2025-10-10 15:02:00] 2025-10-10 13:01:36,131 | INFO     | maximum number of monitored processes: 6
[2025-10-10 15:02:00] 2025-10-10 13:01:36,769 | INFO     | time since job start (3167s) is within the limit (172800.0s)
[2025-10-10 15:02:00] 2025-10-10 13:01:36,976 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 15:02:00] 2025-10-10 13:01:36,983 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2729.5603749999996
[2025-10-10 15:02:00] 2025-10-10 13:01:36,989 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6837343919/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:02:00] 2025-10-10 13:01:36,990 | INFO     | extracted standard info from prmon json
[2025-10-10 15:02:00] 2025-10-10 13:01:36,990 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 15:02:00] 2025-10-10 13:01:36,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 15:02:00] 2025-10-10 13:01:36,990 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 15:02:00] 2025-10-10 13:01:36,990 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 15:02:00] 2025-10-10 13:01:36,992 | INFO     | fitting pss+swap vs Time
[2025-10-10 15:02:00] 2025-10-10 13:01:36,992 | INFO     | sum of square deviations: 28242390.0
[2025-10-10 15:02:00] 2025-10-10 13:01:36,992 | INFO     | sum of deviations: -184843968.99999994
[2025-10-10 15:02:00] 2025-10-10 13:01:36,992 | INFO     | mean x: 1760099801.0
[2025-10-10 15:02:00] 2025-10-10 13:01:36,993 | INFO     | mean y: 2758563.933333333
[2025-10-10 15:02:00] 2025-10-10 13:01:36,993 | INFO     | -- intersect: 11522457606.859589
[2025-10-10 15:02:00] 2025-10-10 13:01:36,993 | INFO     | intersect: 11522457606.859589
[2025-10-10 15:02:00] 2025-10-10 13:01:36,993 | INFO     | chi2: 0.0026090486706117255
[2025-10-10 15:02:00] 2025-10-10 13:01:36,993 | INFO     | -- intersect: 11522457606.859589
[2025-10-10 15:02:00] 2025-10-10 13:01:36,993 | INFO     | current memory leak: -6.54 B/s (using 45 data points, chi2=0.00)
[2025-10-10 15:02:00] 2025-10-10 13:01:36,994 | INFO     | could have reported an average CPU frequency of 2759 MHz (5 samples)
[2025-10-10 15:02:00] 2025-10-10 13:01:36,994 | INFO     | ..............................
[2025-10-10 15:02:00] 2025-10-10 13:01:36,994 | INFO     | . Timing measurements:
[2025-10-10 15:02:00] 2025-10-10 13:01:36,994 | INFO     | . get job = 0 s
[2025-10-10 15:02:00] 2025-10-10 13:01:36,994 | INFO     | . initial setup = 1 s
[2025-10-10 15:02:00] 2025-10-10 13:01:36,994 | INFO     | . payload setup = 5 s
[2025-10-10 15:02:00] 2025-10-10 13:01:36,994 | INFO     | . stage-in = 0 s
[2025-10-10 15:02:00] 2025-10-10 13:01:36,994 | INFO     | . payload execution = 3139 s
[2025-10-10 15:02:00] 2025-10-10 13:01:36,995 | INFO     | . stage-out = 0 s
[2025-10-10 15:02:00] 2025-10-10 13:01:36,995 | INFO     | . log creation = 0 s
[2025-10-10 15:02:00] 2025-10-10 13:01:36,995 | INFO     | ..............................
[2025-10-10 15:02:00] 2025-10-10 13:01:37,071 | INFO     | 
[2025-10-10 15:02:00] 2025-10-10 13:01:37,072 | INFO     | job summary report
[2025-10-10 15:02:00] 2025-10-10 13:01:37,072 | INFO     | --------------------------------------------------
[2025-10-10 15:02:00] 2025-10-10 13:01:37,072 | INFO     | PanDA job id: 6837343919
[2025-10-10 15:02:00] 2025-10-10 13:01:37,072 | INFO     | task id: 46676269
[2025-10-10 15:02:00] 2025-10-10 13:01:37,072 | INFO     | errors: (none)
[2025-10-10 15:02:00] 2025-10-10 13:01:37,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 15:02:00] 2025-10-10 13:01:37,072 | INFO     | pilot state: finished 
[2025-10-10 15:02:00] 2025-10-10 13:01:37,072 | INFO     | transexitcode: 0
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | exeerrorcode: 0
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | exeerrordiag: 
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | exitcode: 0
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | exitmsg: OK
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | cpuconsumptiontime: 32700 s
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | nevents: 400
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | neventsw: 0
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | pid: 3905611
[2025-10-10 15:02:00] 2025-10-10 13:01:37,073 | INFO     | pgrp: 3905611
[2025-10-10 15:02:00] 2025-10-10 13:01:37,074 | INFO     | corecount: 12
[2025-10-10 15:02:00] 2025-10-10 13:01:37,074 | INFO     | event service: False
[2025-10-10 15:02:00] 2025-10-10 13:01:37,074 | INFO     | sizes: {0: 2348804, 4: 2349066, 11: 2349094, 3148: 2374568, 3149: 2383622, 3153: 2383792}
[2025-10-10 15:02:00] 2025-10-10 13:01:37,074 | INFO     | --------------------------------------------------
[2025-10-10 15:02:00] 2025-10-10 13:01:37,074 | INFO     | 
[2025-10-10 15:02:00] 2025-10-10 13:01:37,074 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-10 15:02:00] 2025-10-10 13:01:37,092 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 15:02:00] 2025-10-10 13:01:37,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 15:02:00] 2025-10-10 13:01:37,095 | INFO     | job 6837343919 has completed (purged errors)
[2025-10-10 15:02:00] 2025-10-10 13:01:37,095 | INFO     | overall cleanup function is called
[2025-10-10 15:02:00] 2025-10-10 13:01:37,949 | INFO     | PID=3898877 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 15:02:00] 2025-10-10 13:01:37,949 | INFO     | .. there are 2 such processes running
[2025-10-10 15:02:00] 2025-10-10 13:01:38,104 | INFO     | --- collectZombieJob: --- 10, [3905611]
[2025-10-10 15:02:00] 2025-10-10 13:01:38,105 | INFO     | zombie collector waiting for pid 3905611
[2025-10-10 15:02:00] 2025-10-10 13:01:38,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 15:02:00] 2025-10-10 13:01:38,105 | INFO     | collected zombie processes
[2025-10-10 15:02:00] 2025-10-10 13:01:38,105 | INFO     | will attempt to kill all subprocesses of pid=3905611
[2025-10-10 15:02:00] 2025-10-10 13:01:38,246 | INFO     | process IDs to be killed: [3905611] (in reverse order)
[2025-10-10 15:02:00] 2025-10-10 13:01:38,296 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 15:02:00] 2025-10-10 13:01:38,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 15:02:00] 2025-10-10 13:01:38,301 | INFO     | did not find any defunct processes belonging to 3905611
[2025-10-10 15:02:00] 2025-10-10 13:01:38,305 | INFO     | did not find any defunct processes belonging to 3905611
[2025-10-10 15:02:00] 2025-10-10 13:01:38,306 | INFO     | ready for new job
[2025-10-10 15:02:00] 2025-10-10 13:01:38,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 15:02:00] 2025-10-10 13:01:38,307 | INFO     | ***************************************
[2025-10-10 15:02:00] 2025-10-10 13:01:38,307 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 15:02:00] 2025-10-10 13:01:38,307 | INFO     | ***************************************
[2025-10-10 15:02:00] 2025-10-10 13:01:38,307 | INFO     | 
[2025-10-10 15:02:00] 2025-10-10 13:01:38,309 | INFO     | architecture information:
[2025-10-10 15:02:00] 2025-10-10 13:01:38,309 | INFO     | executing command: cat /etc/os-release
[2025-10-10 15:02:00] 2025-10-10 13:01:38,323 | INFO     | cat /etc/os-release:
[2025-10-10 15:02:00] NAME="CentOS Linux"
[2025-10-10 15:02:00] VERSION="7 (Core)"
[2025-10-10 15:02:00] ID="centos"
[2025-10-10 15:02:00] ID_LIKE="rhel fedora"
[2025-10-10 15:02:00] VERSION_ID="7"
[2025-10-10 15:02:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 15:02:00] ANSI_COLOR="0;31"
[2025-10-10 15:02:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 15:02:00] HOME_URL="https://www.centos.org/"
[2025-10-10 15:02:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 15:02:00] 
[2025-10-10 15:02:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 15:02:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 15:02:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 15:02:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 15:02:00] 
[2025-10-10 15:02:00] 2025-10-10 13:01:38,323 | INFO     | ***************************************
[2025-10-10 15:02:00] 2025-10-10 13:01:38,826 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-10 15:02:00] 2025-10-10 13:01:38,842 | INFO     | sufficient remaining disk space (65390247936 B)
[2025-10-10 15:02:00] 2025-10-10 13:01:38,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 15:02:00] 2025-10-10 13:01:38,842 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 15:02:00] 2025-10-10 13:01:38,842 | INFO     | update_server=False
[2025-10-10 15:02:00] 2025-10-10 13:01:38,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 15:02:00] 2025-10-10 13:01:38,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:02:00] 2025-10-10 13:01:38,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 15:02:00] 2025-10-10 13:01:38,843 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-10 15:02:00] 2025-10-10 13:01:38,844 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 15:02:00] 2025-10-10 13:01:38,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 15:02:00] 2025-10-10 13:01:38,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 15:02:00] 2025-10-10 13:01:38,871 | INFO     | all payload control threads have been joined
[2025-10-10 15:02:00] 2025-10-10 13:01:39,256 | INFO     | all data control threads have been joined
[2025-10-10 15:02:00] 2025-10-10 13:01:39,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 15:02:00] 2025-10-10 13:01:39,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:02:00] 2025-10-10 13:01:39,639 | INFO     | aborting loop
[2025-10-10 15:02:00] 2025-10-10 13:01:39,848 | INFO     | [job] retrieve thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:39,849 | INFO     | [job] queue monitor thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:39,877 | INFO     | [payload] control thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:39,934 | INFO     | [data] copytool_in thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:39,997 | INFO     | [payload] validate_post thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:40,110 | INFO     | [payload] failed_post thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:40,261 | INFO     | [data] control thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:40,283 | INFO     | [job] validate thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:40,285 | INFO     | all job control threads have been joined
[2025-10-10 15:02:00] 2025-10-10 13:01:40,581 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:40,645 | INFO     | [job] job monitor thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:40,704 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:40,849 | INFO     | [data] copytool_out thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:41,002 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:41,291 | INFO     | [job] control thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:43,416 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:49,328 | INFO     | job.realtimelogging is not enabled
[2025-10-10 15:02:00] 2025-10-10 13:01:50,333 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 15:02:00] 2025-10-10 13:01:53,965 | INFO     | [monitor] cgroup control has ended
[2025-10-10 15:02:00] 2025-10-10 13:01:54,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027978327872)>', '<ExcThread(monitor, started 140027627542272)>']
[2025-10-10 15:02:00] 2025-10-10 13:01:54,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 15:02:00] 2025-10-10 13:01:54,925 | INFO     | [monitor] control thread has ended
[2025-10-10 15:02:00] 2025-10-10 13:01:59,883 | INFO     | all workflow threads have been joined
[2025-10-10 15:02:00] 2025-10-10 13:01:59,883 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 15:02:00] 2025-10-10 13:01:59,883 | INFO     | traces error code: 0
[2025-10-10 15:02:00] 2025-10-10 13:01:59,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 15:02:00] 2025-10-10 13:01:59,992 [wrapper] ==== pilot stdout END ====
[2025-10-10 15:02:00] 2025-10-10 13:01:59,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 15:02:00] 2025-10-10 13:01:59,997 [wrapper] pilotpid: 3898877
[2025-10-10 15:02:00] 2025-10-10 13:01:59,999 [wrapper] Pilot exit status: 0
[2025-10-10 15:02:00] 2025-10-10 13:02:00,009 [wrapper] pandaids: 6837343919
[2025-10-10 15:02:00] 2025-10-10 13:02:00,043 [wrapper] cleanup supervisor_pilot 3956549 3898878
[2025-10-10 15:02:00] 2025-10-10 13:02:00,047 [wrapper] Test setup, not cleaning
[2025-10-10 15:02:00] 2025-10-10 13:02:00,049 [wrapper] apfmon messages muted
[2025-10-10 15:02:00] 2025-10-10 13:02:00,052 [wrapper] ==== wrapper stdout END ====
[2025-10-10 15:02:00] 2025-10-10 13:02:00,054 [wrapper] ==== wrapper stderr END ====
[2025-10-10 15:02:00]  *** Error codes and diagnostics ***
[2025-10-10 15:02:00]     "exeErrorCode": 0,
[2025-10-10 15:02:00]     "exeErrorDiag": "",
[2025-10-10 15:02:00]     "pilotErrorCode": 0,
[2025-10-10 15:02:00]     "pilotErrorDiag": "",
[2025-10-10 15:02:00]  *** Listing of results directory ***
[2025-10-10 15:02:00] total 406260
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc    557409 Oct  9 15:21 pilot3.tar.gz
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc      5112 Oct  9 15:23 queuedata.json
[2025-10-10 15:02:00] -rwx------. 1 boinc boinc     36292 Oct  9 15:26 runpilot2-wrapper.sh
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc       100 Oct 10 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 15:02:00] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 14:08 run_atlas
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc       105 Oct 10 14:08 job.xml
[2025-10-10 15:02:00] -rw-r--r--. 2 boinc boinc 220467096 Oct 10 14:08 EVNT.46676267._000774.pool.root.1
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc      6518 Oct 10 14:08 init_data.xml
[2025-10-10 15:02:00] -rw-r--r--. 2 boinc boinc     15120 Oct 10 14:08 start_atlas.sh
[2025-10-10 15:02:00] drwxrwx--x. 2 boinc boinc      4096 Oct 10 14:08 shared
[2025-10-10 15:02:00] -rw-r--r--. 2 boinc boinc    569681 Oct 10 14:08 input.tar.gz
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc         0 Oct 10 14:08 boinc_lockfile
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc      2548 Oct 10 14:08 pandaJob.out
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc    975517 Oct 10 14:08 agis_schedconf.cvmfs.json
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc   1560580 Oct 10 14:08 agis_ddmendpoints.agis.ALL.json
[2025-10-10 15:02:00] drwx------. 5 boinc boinc      4096 Oct 10 14:08 pilot3
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc 189931843 Oct 10 15:01 HITS.46676269._018693.pool.root.1
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc       529 Oct 10 15:01 boinc_task_state.xml
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc      1029 Oct 10 15:01 memory_monitor_summary.json
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc    367258 Oct 10 15:01 log.46676269._018693.job.log.tgz.1
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc        95 Oct 10 15:01 pilot_heartbeat.json
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc      7774 Oct 10 15:01 heartbeat.json
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc      4624 Oct 10 15:01 pilotlog.txt
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc    487302 Oct 10 15:02 log.46676269._018693.job.log.1
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc       357 Oct 10 15:02 output.list
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc       620 Oct 10 15:02 runtime_log
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc    870400 Oct 10 15:02 result.tar.gz
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc       663 Oct 10 15:02 xulMDmgq5Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm06ZNDmBDQBFm.diag
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc      8750 Oct 10 15:02 runtime_log.err
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc      8192 Oct 10 15:02 boinc_mmap_file
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc     21884 Oct 10 15:02 stderr.txt
[2025-10-10 15:02:00] -rw-r--r--. 1 boinc boinc        27 Oct 10 15:02 wrapper_checkpoint.txt
[2025-10-10 15:02:00] HITS file was successfully produced:
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc 189931843 Oct 10 15:01 shared/HITS.pool.root.1
[2025-10-10 15:02:00]  *** Contents of shared directory: ***
[2025-10-10 15:02:00] total 402220
[2025-10-10 15:02:00] -rw-r--r--. 2 boinc boinc 220467096 Oct 10 14:08 ATLAS.root_0
[2025-10-10 15:02:00] -rw-r--r--. 2 boinc boinc     15120 Oct 10 14:08 start_atlas.sh
[2025-10-10 15:02:00] -rw-r--r--. 2 boinc boinc    569681 Oct 10 14:08 input.tar.gz
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc 189931843 Oct 10 15:01 HITS.pool.root.1
[2025-10-10 15:02:00] -rw-------. 1 boinc boinc    870400 Oct 10 15:02 result.tar.gz
15:02:02 (3895009): run_atlas exited; CPU time 32717.725527
15:02:02 (3895009): called boinc_finish(0)

</stderr_txt>
]]>

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