Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:24:00 (1512561): wrapper (7.7.26015): starting
07:24:00 (1512561): wrapper: running run_atlas (--nthreads 3)
[2025-10-10 07:24:00] Arguments: --nthreads 3
[2025-10-10 07:24:00] Threads: 3
[2025-10-10 07:24:00] Checking for CVMFS
[2025-10-10 07:24:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 07:24:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 07:24:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 07:24:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 07:24:00] 2.9.2.0 1182477 1122 74104 151535 3 57 3193733 36864001 0 130560 0 859400 99.990 34654 856 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 07:24:00] CVMFS is ok
[2025-10-10 07:24:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 07:24:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 07:24:00] Further information can be found at the LHC@home message board.
[2025-10-10 07:24:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 07:24:00] Checking for apptainer binary...
[2025-10-10 07:24:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 07:24:00] Running /usr/bin/apptainer --version
[2025-10-10 07:24:00] apptainer version 1.4.1-1.1
[2025-10-10 07:24:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 07:24:00] thA332
[2025-10-10 07:24:00] apptainer works
[2025-10-10 07:24:00] Set ATHENA_PROC_NUMBER=3
[2025-10-10 07:24:00] Set ATHENA_CORE_NUMBER=3
[2025-10-10 07:24:00] Starting ATLAS job with PandaID=6837334343
[2025-10-10 07:24:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 08:48:17]  *** The last 200 lines of the pilot log: ***
[2025-10-10 08:48:17] 2025-10-10 06:48:01,338 | INFO     | process IDs to be killed: [1522713] (in reverse order)
[2025-10-10 08:48:17] 2025-10-10 06:48:01,362 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 08:48:17] 2025-10-10 06:48:01,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 08:48:17] 2025-10-10 06:48:01,364 | INFO     | did not find any defunct processes belonging to 1522713
[2025-10-10 08:48:17] 2025-10-10 06:48:01,365 | INFO     | did not find any defunct processes belonging to 1522713
[2025-10-10 08:48:17] 2025-10-10 06:48:01,365 | INFO     | ready for new job
[2025-10-10 08:48:17] 2025-10-10 06:48:01,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 08:48:17] 2025-10-10 06:48:01,366 | INFO     | ***************************************
[2025-10-10 08:48:17] 2025-10-10 06:48:01,366 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 08:48:17] 2025-10-10 06:48:01,366 | INFO     | ***************************************
[2025-10-10 08:48:17] 2025-10-10 06:48:01,366 | INFO     | 
[2025-10-10 08:48:17] 2025-10-10 06:48:01,366 | INFO     | architecture information:
[2025-10-10 08:48:17] 2025-10-10 06:48:01,366 | INFO     | executing command: cat /etc/os-release
[2025-10-10 08:48:17] 2025-10-10 06:48:01,374 | INFO     | cat /etc/os-release:
[2025-10-10 08:48:17] NAME="CentOS Linux"
[2025-10-10 08:48:17] VERSION="7 (Core)"
[2025-10-10 08:48:17] ID="centos"
[2025-10-10 08:48:17] ID_LIKE="rhel fedora"
[2025-10-10 08:48:17] VERSION_ID="7"
[2025-10-10 08:48:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 08:48:17] ANSI_COLOR="0;31"
[2025-10-10 08:48:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 08:48:17] HOME_URL="https://www.centos.org/"
[2025-10-10 08:48:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 08:48:17] 
[2025-10-10 08:48:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 08:48:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 08:48:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 08:48:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 08:48:17] 
[2025-10-10 08:48:17] 2025-10-10 06:48:01,375 | INFO     | ***************************************
[2025-10-10 08:48:17] 2025-10-10 06:48:01,878 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 08:48:17] 2025-10-10 06:48:01,890 | INFO     | sufficient remaining disk space (256321257472 B)
[2025-10-10 08:48:17] 2025-10-10 06:48:01,890 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | INFO     | update_server=False
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 08:48:17] 2025-10-10 06:48:01,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 08:48:17] 2025-10-10 06:48:02,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 08:48:17] 2025-10-10 06:48:02,021 | INFO     | aborting loop
[2025-10-10 08:48:17] 2025-10-10 06:48:02,508 | INFO     | all payload control threads have been joined
[2025-10-10 08:48:17] 2025-10-10 06:48:02,687 | INFO     | all job control threads have been joined
[2025-10-10 08:48:17] 2025-10-10 06:48:02,896 | INFO     | [job] queue monitor thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:02,897 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:02,897 | INFO     | [payload] validate_post thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:02,897 | INFO     | [job] retrieve thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:02,940 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:02,979 | INFO     | all data control threads have been joined
[2025-10-10 08:48:17] 2025-10-10 06:48:03,026 | INFO     | [job] job monitor thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:03,191 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:03,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:03,514 | INFO     | [payload] control thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:03,693 | INFO     | [job] control thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:03,777 | INFO     | [data] copytool_in thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:03,897 | INFO     | [data] copytool_out thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:03,985 | INFO     | [data] control thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:03,985 | INFO     | [payload] failed_post thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:04,298 | INFO     | [job] validate thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:04,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 08:48:17] 2025-10-10 06:48:08,344 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 08:48:17] 2025-10-10 06:48:11,929 | INFO     | [monitor] cgroup control has ended
[2025-10-10 08:48:17] 2025-10-10 06:48:11,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814191376192)>', '<ExcThread(monitor, started 139813701269248)>']
[2025-10-10 08:48:17] 2025-10-10 06:48:12,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 08:48:17] 2025-10-10 06:48:12,950 | INFO     | [monitor] control thread has ended
[2025-10-10 08:48:17] 2025-10-10 06:48:17,018 | INFO     | all workflow threads have been joined
[2025-10-10 08:48:17] 2025-10-10 06:48:17,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 08:48:17] 2025-10-10 06:48:17,018 | INFO     | traces error code: 0
[2025-10-10 08:48:17] 2025-10-10 06:48:17,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 08:48:17] 2025-10-10 06:48:17,068 [wrapper] ==== pilot stdout END ====
[2025-10-10 08:48:17] 2025-10-10 06:48:17,071 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 08:48:17] 2025-10-10 06:48:17,073 [wrapper] pilotpid: 1516279
[2025-10-10 08:48:17] 2025-10-10 06:48:17,075 [wrapper] Pilot exit status: 0
[2025-10-10 08:48:17] 2025-10-10 06:48:17,082 [wrapper] pandaids: 6837334343
[2025-10-10 08:48:17] 2025-10-10 06:48:17,098 [wrapper] cleanup supervisor_pilot 1534852 1516280
[2025-10-10 08:48:17] 2025-10-10 06:48:17,100 [wrapper] Test setup, not cleaning
[2025-10-10 08:48:17] 2025-10-10 06:48:17,103 [wrapper] apfmon messages muted
[2025-10-10 08:48:17] 2025-10-10 06:48:17,105 [wrapper] ==== wrapper stdout END ====
[2025-10-10 08:48:17] 2025-10-10 06:48:17,107 [wrapper] ==== wrapper stderr END ====
[2025-10-10 08:48:17]  *** Error codes and diagnostics ***
[2025-10-10 08:48:17]     "exeErrorCode": 0,
[2025-10-10 08:48:17]     "exeErrorDiag": "",
[2025-10-10 08:48:17]     "pilotErrorCode": 0,
[2025-10-10 08:48:17]     "pilotErrorDiag": "",
[2025-10-10 08:48:17]  *** Listing of results directory ***
[2025-10-10 08:48:17] total 407268
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc    557409 Oct  9 13:26 pilot3.tar.gz
[2025-10-10 08:48:17] -rwx------ 1 boinc boinc     36292 Oct  9 13:46 runpilot2-wrapper.sh
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc      5112 Oct  9 13:46 queuedata.json
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc       100 Oct 10 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 08:48:17] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 07:24 run_atlas
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc       105 Oct 10 07:24 job.xml
[2025-10-10 08:48:17] -rw-r--r-- 2 boinc boinc 218733958 Oct 10 07:24 EVNT.46676267._000667.pool.root.1
[2025-10-10 08:48:17] -rw-r--r-- 2 boinc boinc    569674 Oct 10 07:24 input.tar.gz
[2025-10-10 08:48:17] -rw-r--r-- 2 boinc boinc     15120 Oct 10 07:24 start_atlas.sh
[2025-10-10 08:48:17] drwxrwx--x 2 boinc boinc      4096 Oct 10 07:24 shared
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc         0 Oct 10 07:24 boinc_setup_complete
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc      6437 Oct 10 07:24 init_data.xml
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc         0 Oct 10 07:24 boinc_lockfile
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc      2548 Oct 10 07:24 pandaJob.out
[2025-10-10 08:48:17] -rw------- 1 boinc boinc    975446 Oct 10 07:24 agis_schedconf.cvmfs.json
[2025-10-10 08:48:17] -rw------- 1 boinc boinc   1560580 Oct 10 07:24 agis_ddmendpoints.agis.ALL.json
[2025-10-10 08:48:17] drwx------ 5 boinc boinc      4096 Oct 10 07:24 pilot3
[2025-10-10 08:48:17] -rw------- 1 boinc boinc        95 Oct 10 08:47 pilot_heartbeat.json
[2025-10-10 08:48:17] -rw------- 1 boinc boinc 192454636 Oct 10 08:47 HITS.46676269._016179.pool.root.1
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc       529 Oct 10 08:47 boinc_task_state.xml
[2025-10-10 08:48:17] -rw------- 1 boinc boinc      1022 Oct 10 08:47 memory_monitor_summary.json
[2025-10-10 08:48:17] -rw------- 1 boinc boinc    241835 Oct 10 08:47 log.46676269._016179.job.log.tgz.1
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc      8192 Oct 10 08:47 boinc_mmap_file
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc        27 Oct 10 08:47 wrapper_checkpoint.txt
[2025-10-10 08:48:17] -rw------- 1 boinc boinc      7763 Oct 10 08:47 heartbeat.json
[2025-10-10 08:48:17] -rw------- 1 boinc boinc      4556 Oct 10 08:48 pilotlog.txt
[2025-10-10 08:48:17] -rw------- 1 boinc boinc    737447 Oct 10 08:48 log.46676269._016179.job.log.1
[2025-10-10 08:48:17] -rw------- 1 boinc boinc       357 Oct 10 08:48 output.list
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc       620 Oct 10 08:48 runtime_log
[2025-10-10 08:48:17] -rw------- 1 boinc boinc   1003520 Oct 10 08:48 result.tar.gz
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc      8777 Oct 10 08:48 runtime_log.err
[2025-10-10 08:48:17] -rw------- 1 boinc boinc       658 Oct 10 08:48 FjxLDmRH4Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTnNMDmywCdDm.diag
[2025-10-10 08:48:17] -rw-r--r-- 1 boinc boinc     10002 Oct 10 08:48 stderr.txt
[2025-10-10 08:48:17] HITS file was successfully produced:
[2025-10-10 08:48:17] -rw------- 1 boinc boinc 192454636 Oct 10 08:47 shared/HITS.pool.root.1
[2025-10-10 08:48:17]  *** Contents of shared directory: ***
[2025-10-10 08:48:17] total 403112
[2025-10-10 08:48:17] -rw-r--r-- 2 boinc boinc 218733958 Oct 10 07:24 ATLAS.root_0
[2025-10-10 08:48:17] -rw-r--r-- 2 boinc boinc    569674 Oct 10 07:24 input.tar.gz
[2025-10-10 08:48:17] -rw-r--r-- 2 boinc boinc     15120 Oct 10 07:24 start_atlas.sh
[2025-10-10 08:48:17] -rw------- 1 boinc boinc 192454636 Oct 10 08:47 HITS.pool.root.1
[2025-10-10 08:48:17] -rw------- 1 boinc boinc   1003520 Oct 10 08:48 result.tar.gz
08:48:18 (1512561): run_atlas exited; CPU time 14421.688735
08:48:18 (1512561): called boinc_finish(0)

</stderr_txt>
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