Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:04:06 (2154531): wrapper (7.7.26015): starting
15:04:06 (2154531): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 15:04:06] Arguments: --nthreads 8
[2025-10-09 15:04:06] Threads: 8
[2025-10-09 15:04:06] Checking for CVMFS
[2025-10-09 15:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 15:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 15:04:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 15:04:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 15:04:07] 2.10.1.0 4440 183147 171932 151520 3 188 14607875 18432001 3665 130560 2 215253387 99.991 7004380 5546 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-09 15:04:07] CVMFS is ok
[2025-10-09 15:04:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 15:04:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 15:04:07] Further information can be found at the LHC@home message board.
[2025-10-09 15:04:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 15:04:07] Checking for apptainer binary...
[2025-10-09 15:04:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 15:04:07] Running /usr/bin/apptainer --version
[2025-10-09 15:04:07] apptainer version 1.1.9-1.el8
[2025-10-09 15:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 15:04:07] c-16-31.aglt2.org
[2025-10-09 15:04:07] apptainer works
[2025-10-09 15:04:07] Set ATHENA_PROC_NUMBER=8
[2025-10-09 15:04:07] Set ATHENA_CORE_NUMBER=8
[2025-10-09 15:04:07] Starting ATLAS job with PandaID=6837360673
[2025-10-09 15:04:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 17:34:41]  *** The last 200 lines of the pilot log: ***
[2025-10-09 17:34:41] 2025-10-09 21:34:07,655 | INFO     | sum of deviations: 2882637228.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,655 | INFO     | mean x: 1760041292.5
[2025-10-09 17:34:41] 2025-10-09 21:34:07,656 | INFO     | mean y: 2505123.61971831
[2025-10-09 17:34:41] 2025-10-09 21:34:07,656 | INFO     | -- intersect: -5712161888.10472
[2025-10-09 17:34:41] 2025-10-09 21:34:07,656 | INFO     | intersect: -5712161888.10472
[2025-10-09 17:34:41] 2025-10-09 21:34:07,657 | INFO     | chi2: 0.0030834992382497662
[2025-10-09 17:34:41] 2025-10-09 21:34:07,657 | INFO     | current chi2=0.0030834992382497662 (change=99.80461949627791 %)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,657 | INFO     | sum of square deviations: 797291228.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,658 | INFO     | sum of deviations: 2531282291.0000005
[2025-10-09 17:34:41] 2025-10-09 21:34:07,658 | INFO     | mean x: 1760041445.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,658 | INFO     | mean y: 2505685.4744525547
[2025-10-09 17:34:41] 2025-10-09 21:34:07,659 | INFO     | -- intersect: -5585366831.736474
[2025-10-09 17:34:41] 2025-10-09 21:34:07,659 | INFO     | intersect: -5585366831.736474
[2025-10-09 17:34:41] 2025-10-09 21:34:07,659 | INFO     | chi2: 0.0013028701024102893
[2025-10-09 17:34:41] 2025-10-09 21:34:07,659 | INFO     | current chi2=0.0013028701024102893 (change=57.747026941060156 %)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,660 | INFO     | sum of square deviations: 713140813.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,661 | INFO     | sum of deviations: 2096213424.4999995
[2025-10-09 17:34:41] 2025-10-09 21:34:07,661 | INFO     | mean x: 1760041597.5
[2025-10-09 17:34:41] 2025-10-09 21:34:07,661 | INFO     | mean y: 2506488.3106060605
[2025-10-09 17:34:41] 2025-10-09 21:34:07,661 | INFO     | -- intersect: -5170977846.203179
[2025-10-09 17:34:41] 2025-10-09 21:34:07,661 | INFO     | intersect: -5170977846.203179
[2025-10-09 17:34:41] 2025-10-09 21:34:07,662 | INFO     | chi2: 0.0004895047002760251
[2025-10-09 17:34:41] 2025-10-09 21:34:07,662 | INFO     | current chi2=0.0004895047002760251 (change=62.42874102564415 %)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,662 | INFO     | sum of square deviations: 635130048.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,663 | INFO     | sum of deviations: 1533005335.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,663 | INFO     | mean x: 1760041750.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,663 | INFO     | mean y: 2507588.5826771655
[2025-10-09 17:34:41] 2025-10-09 21:34:07,664 | INFO     | -- intersect: -4245682842.7614503
[2025-10-09 17:34:41] 2025-10-09 21:34:07,664 | INFO     | intersect: -4245682842.7614503
[2025-10-09 17:34:41] 2025-10-09 21:34:07,664 | INFO     | chi2: 0.00023126265423094636
[2025-10-09 17:34:41] 2025-10-09 21:34:07,664 | INFO     | current chi2=0.00023126265423094636 (change=52.755784755378144 %)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,665 | INFO     | sum of square deviations: 563026370.5
[2025-10-09 17:34:41] 2025-10-09 21:34:07,665 | INFO     | sum of deviations: 1265705134.4999993
[2025-10-09 17:34:41] 2025-10-09 21:34:07,666 | INFO     | mean x: 1760041902.5
[2025-10-09 17:34:41] 2025-10-09 21:34:07,666 | INFO     | mean y: 2508149.5655737706
[2025-10-09 17:34:41] 2025-10-09 21:34:07,666 | INFO     | -- intersect: -3954134362.491323
[2025-10-09 17:34:41] 2025-10-09 21:34:07,666 | INFO     | intersect: -3954134362.491323
[2025-10-09 17:34:41] 2025-10-09 21:34:07,666 | INFO     | chi2: 0.00018682398577589917
[2025-10-09 17:34:41] 2025-10-09 21:34:07,667 | INFO     | current chi2=0.00018682398577589917 (change=19.215669993421987 %)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,667 | INFO     | left removable region: 50
[2025-10-09 17:34:41] 2025-10-09 21:34:07,667 | INFO     | sum of square deviations: 233641590.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,668 | INFO     | sum of deviations: 594719682.9999999
[2025-10-09 17:34:41] 2025-10-09 21:34:07,668 | INFO     | mean x: 1760042482.0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,668 | INFO     | mean y: 2509679.5494505493
[2025-10-09 17:34:41] 2025-10-09 21:34:07,668 | INFO     | -- intersect: -4477565580.003324
[2025-10-09 17:34:41] 2025-10-09 21:34:07,668 | INFO     | intersect: -4477565580.003324
[2025-10-09 17:34:41] 2025-10-09 21:34:07,669 | INFO     | chi2: 0.0001668655693672978
[2025-10-09 17:34:41] 2025-10-09 21:34:07,669 | INFO     | -- intersect: -4477565580.003324
[2025-10-09 17:34:41] 2025-10-09 21:34:07,669 | INFO     | current memory leak: 2.55 B/s (using 91 data points, chi2=0.00)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,670 | INFO     | could have reported an average CPU frequency of 2934 MHz (8 samples)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,670 | INFO     | ..............................
[2025-10-09 17:34:41] 2025-10-09 21:34:07,670 | INFO     | . Timing measurements:
[2025-10-09 17:34:41] 2025-10-09 21:34:07,670 | INFO     | . get job = 0 s
[2025-10-09 17:34:41] 2025-10-09 21:34:07,670 | INFO     | . initial setup = 2 s
[2025-10-09 17:34:41] 2025-10-09 21:34:07,670 | INFO     | . payload setup = 6 s
[2025-10-09 17:34:41] 2025-10-09 21:34:07,671 | INFO     | . stage-in = 0 s
[2025-10-09 17:34:41] 2025-10-09 21:34:07,671 | INFO     | . payload execution = 8950 s
[2025-10-09 17:34:41] 2025-10-09 21:34:07,671 | INFO     | . stage-out = 0 s
[2025-10-09 17:34:41] 2025-10-09 21:34:07,671 | INFO     | . log creation = 0 s
[2025-10-09 17:34:41] 2025-10-09 21:34:07,671 | INFO     | ..............................
[2025-10-09 17:34:41] 2025-10-09 21:34:07,826 | INFO     | 
[2025-10-09 17:34:41] 2025-10-09 21:34:07,826 | INFO     | job summary report
[2025-10-09 17:34:41] 2025-10-09 21:34:07,826 | INFO     | --------------------------------------------------
[2025-10-09 17:34:41] 2025-10-09 21:34:07,826 | INFO     | PanDA job id: 6837360673
[2025-10-09 17:34:41] 2025-10-09 21:34:07,827 | INFO     | task id: 46376905
[2025-10-09 17:34:41] 2025-10-09 21:34:07,827 | INFO     | errors: (none)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 17:34:41] 2025-10-09 21:34:07,827 | INFO     | pilot state: finished 
[2025-10-09 17:34:41] 2025-10-09 21:34:07,827 | INFO     | transexitcode: 0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,827 | INFO     | exeerrorcode: 0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,828 | INFO     | exeerrordiag: 
[2025-10-09 17:34:41] 2025-10-09 21:34:07,828 | INFO     | exitcode: 0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,828 | INFO     | exitmsg: OK
[2025-10-09 17:34:41] 2025-10-09 21:34:07,828 | INFO     | cpuconsumptiontime: 65258 s
[2025-10-09 17:34:41] 2025-10-09 21:34:07,828 | INFO     | nevents: 400
[2025-10-09 17:34:41] 2025-10-09 21:34:07,828 | INFO     | neventsw: 0
[2025-10-09 17:34:41] 2025-10-09 21:34:07,828 | INFO     | pid: 2176950
[2025-10-09 17:34:41] 2025-10-09 21:34:07,829 | INFO     | pgrp: 2176950
[2025-10-09 17:34:41] 2025-10-09 21:34:07,829 | INFO     | corecount: 8
[2025-10-09 17:34:41] 2025-10-09 21:34:07,829 | INFO     | event service: False
[2025-10-09 17:34:41] 2025-10-09 21:34:07,829 | INFO     | sizes: {0: 2348594, 1: 2348793, 5: 2349055, 12: 2349111, 8960: 2377247, 8961: 2377246, 8962: 2386428, 8965: 2386484, 8972: 2386678}
[2025-10-09 17:34:41] 2025-10-09 21:34:07,829 | INFO     | --------------------------------------------------
[2025-10-09 17:34:41] 2025-10-09 21:34:07,829 | INFO     | 
[2025-10-09 17:34:41] 2025-10-09 21:34:07,830 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-09 17:34:41] 2025-10-09 21:34:07,851 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,851 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,851 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,852 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 17:34:41] 2025-10-09 21:34:07,855 | INFO     | job 6837360673 has completed (purged errors)
[2025-10-09 17:34:41] 2025-10-09 21:34:07,855 | INFO     | overall cleanup function is called
[2025-10-09 17:34:41] 2025-10-09 21:34:08,854 | INFO     | PID=2161297 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-09 17:34:41] 2025-10-09 21:34:08,855 | INFO     | .. there are 5 such processes running
[2025-10-09 17:34:41] 2025-10-09 21:34:08,863 | INFO     | --- collectZombieJob: --- 10, [2176950]
[2025-10-09 17:34:41] 2025-10-09 21:34:08,863 | INFO     | zombie collector waiting for pid 2176950
[2025-10-09 17:34:41] 2025-10-09 21:34:08,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 17:34:41] 2025-10-09 21:34:08,863 | INFO     | collected zombie processes
[2025-10-09 17:34:41] 2025-10-09 21:34:08,863 | INFO     | will attempt to kill all subprocesses of pid=2176950
[2025-10-09 17:34:41] 2025-10-09 21:34:09,074 | INFO     | process IDs to be killed: [2176950] (in reverse order)
[2025-10-09 17:34:41] 2025-10-09 21:34:09,170 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 17:34:41] 2025-10-09 21:34:09,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 17:34:41] 2025-10-09 21:34:09,182 | INFO     | did not find any defunct processes belonging to 2176950
[2025-10-09 17:34:41] 2025-10-09 21:34:09,192 | INFO     | did not find any defunct processes belonging to 2176950
[2025-10-09 17:34:41] 2025-10-09 21:34:09,192 | INFO     | ready for new job
[2025-10-09 17:34:41] 2025-10-09 21:34:09,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 17:34:41] 2025-10-09 21:34:09,193 | INFO     | ***************************************
[2025-10-09 17:34:41] 2025-10-09 21:34:09,193 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 17:34:41] 2025-10-09 21:34:09,194 | INFO     | ***************************************
[2025-10-09 17:34:41] 2025-10-09 21:34:09,194 | INFO     | 
[2025-10-09 17:34:41] 2025-10-09 21:34:09,209 | INFO     | architecture information:
[2025-10-09 17:34:41] 2025-10-09 21:34:09,209 | INFO     | executing command: cat /etc/os-release
[2025-10-09 17:34:41] 2025-10-09 21:34:09,222 | INFO     | cat /etc/os-release:
[2025-10-09 17:34:41] NAME="CentOS Linux"
[2025-10-09 17:34:41] VERSION="7 (Core)"
[2025-10-09 17:34:41] ID="centos"
[2025-10-09 17:34:41] ID_LIKE="rhel fedora"
[2025-10-09 17:34:41] VERSION_ID="7"
[2025-10-09 17:34:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 17:34:41] ANSI_COLOR="0;31"
[2025-10-09 17:34:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 17:34:41] HOME_URL="https://www.centos.org/"
[2025-10-09 17:34:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 17:34:41] 
[2025-10-09 17:34:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 17:34:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 17:34:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 17:34:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 17:34:41] 
[2025-10-09 17:34:41] 2025-10-09 21:34:09,222 | INFO     | ***************************************
[2025-10-09 17:34:41] 2025-10-09 21:34:09,725 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-09 17:34:41] 2025-10-09 21:34:09,740 | INFO     | sufficient remaining disk space (103516471296 B)
[2025-10-09 17:34:41] 2025-10-09 21:34:09,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 17:34:41] 2025-10-09 21:34:09,741 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 17:34:41] 2025-10-09 21:34:09,741 | INFO     | update_server=False
[2025-10-09 17:34:41] 2025-10-09 21:34:09,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 17:34:41] 2025-10-09 21:34:09,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:34:41] 2025-10-09 21:34:09,742 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-09 17:34:41] 2025-10-09 21:34:09,743 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 17:34:41] 2025-10-09 21:34:09,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 17:34:41] 2025-10-09 21:34:09,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 17:34:41] 2025-10-09 21:34:09,792 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 17:34:41] 2025-10-09 21:34:09,792 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 17:34:41] 2025-10-09 21:34:09,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:34:41] 2025-10-09 21:34:09,792 | INFO     | will abort loop
[2025-10-09 17:34:41] 2025-10-09 21:34:10,171 | INFO     | all payload control threads have been joined
[2025-10-09 17:34:41] 2025-10-09 21:34:10,389 | INFO     | all data control threads have been joined
[2025-10-09 17:34:41] 2025-10-09 21:34:10,743 | INFO     | [job] queue monitor thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:10,746 | INFO     | [job] retrieve thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:10,797 | INFO     | [job] job monitor thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:10,800 | INFO     | all job control threads have been joined
[2025-10-09 17:34:41] 2025-10-09 21:34:10,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 17:34:41] 2025-10-09 21:34:10,914 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:11,176 | INFO     | [payload] control thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:11,191 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:11,301 | INFO     | [payload] failed_post thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:11,394 | INFO     | [data] control thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:11,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 17:34:41] 2025-10-09 21:34:11,693 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:11,805 | INFO     | [job] control thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:11,810 | INFO     | [data] copytool_in thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:11,989 | INFO     | [job] validate thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:12,319 | INFO     | [payload] validate_post thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:12,899 | INFO     | [data] copytool_out thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:15,483 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:16,923 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-10-09 17:34:41] 2025-10-09 21:34:20,196 | INFO     | job.realtimelogging is not enabled
[2025-10-09 17:34:41] 2025-10-09 21:34:21,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 17:34:41] 2025-10-09 21:34:34,496 | INFO     | [monitor] cgroup control has ended
[2025-10-09 17:34:41] 2025-10-09 21:34:36,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658500986688)>', '<ExcThread(monitor, started 139658201638656)>']
[2025-10-09 17:34:41] 2025-10-09 21:34:36,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 17:34:41] 2025-10-09 21:34:36,874 | INFO     | [monitor] control thread has ended
[2025-10-09 17:34:41] 2025-10-09 21:34:41,163 | INFO     | all workflow threads have been joined
[2025-10-09 17:34:41] 2025-10-09 21:34:41,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 17:34:41] 2025-10-09 21:34:41,164 | INFO     | traces error code: 0
[2025-10-09 17:34:41] 2025-10-09 21:34:41,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 17:34:41] 2025-10-09 21:34:41,271 [wrapper] ==== pilot stdout END ====
[2025-10-09 17:34:41] 2025-10-09 21:34:41,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 17:34:41] 2025-10-09 21:34:41,276 [wrapper] pilotpid: 2161297
[2025-10-09 17:34:41] 2025-10-09 21:34:41,278 [wrapper] Pilot exit status: 0
[2025-10-09 17:34:41] 2025-10-09 21:34:41,287 [wrapper] pandaids: 6837360673
[2025-10-09 17:34:41] 2025-10-09 21:34:41,345 [wrapper] cleanup supervisor_pilot  174626 2161298
[2025-10-09 17:34:41] 2025-10-09 21:34:41,348 [wrapper] Test setup, not cleaning
[2025-10-09 17:34:41] 2025-10-09 21:34:41,351 [wrapper] apfmon messages muted
[2025-10-09 17:34:41] 2025-10-09 21:34:41,353 [wrapper] ==== wrapper stdout END ====
[2025-10-09 17:34:41] 2025-10-09 21:34:41,356 [wrapper] ==== wrapper stderr END ====
[2025-10-09 17:34:41]  *** Error codes and diagnostics ***
[2025-10-09 17:34:41]     "exeErrorCode": 0,
[2025-10-09 17:34:41]     "exeErrorDiag": "",
[2025-10-09 17:34:41]     "pilotErrorCode": 0,
[2025-10-09 17:34:41]     "pilotErrorDiag": "",
[2025-10-09 17:34:41]  *** Listing of results directory ***
[2025-10-09 17:34:41] total 392908
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 06:52 pilot3.tar.gz
[2025-10-09 17:34:41] -rwx------ 1 boincer umatlas     36292 Oct  9 07:02 runpilot2-wrapper.sh
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 07:02 queuedata.json
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas       100 Oct  9 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 17:34:41] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 15:04 run_atlas
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas       105 Oct  9 15:04 job.xml
[2025-10-09 17:34:41] -rw-r--r-- 2 boincer umatlas 217329058 Oct  9 15:04 EVNT.46376901._003895.pool.root.1
[2025-10-09 17:34:41] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 15:04 start_atlas.sh
[2025-10-09 17:34:41] drwxrwx--x 2 boincer umatlas      4096 Oct  9 15:04 shared
[2025-10-09 17:34:41] -rw-r--r-- 2 boincer umatlas    569673 Oct  9 15:04 input.tar.gz
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas         0 Oct  9 15:04 boinc_lockfile
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas      2518 Oct  9 15:04 pandaJob.out
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas    975446 Oct  9 15:04 agis_schedconf.cvmfs.json
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas   1560401 Oct  9 15:04 agis_ddmendpoints.agis.ALL.json
[2025-10-09 17:34:41] drwx------ 5 boincer umatlas      4096 Oct  9 15:04 pilot3
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas      6013 Oct  9 17:31 init_data.xml
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas 177767400 Oct  9 17:33 HITS.46376905._136086.pool.root.1
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas       529 Oct  9 17:33 boinc_task_state.xml
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas        95 Oct  9 17:33 pilot_heartbeat.json
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas      1050 Oct  9 17:33 memory_monitor_summary.json
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas    388670 Oct  9 17:33 log.46376905._136086.job.log.tgz.1
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas      7826 Oct  9 17:34 heartbeat.json
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas      4811 Oct  9 17:34 pilotlog.txt
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas   1278449 Oct  9 17:34 log.46376905._136086.job.log.1
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas       357 Oct  9 17:34 output.list
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas       620 Oct  9 17:34 runtime_log
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas   1689600 Oct  9 17:34 result.tar.gz
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas      8698 Oct  9 17:34 runtime_log.err
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas       655 Oct  9 17:34 1C1KDmUa3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnSZNDmt4ZkMn.diag
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 17:34 boinc_mmap_file
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas        27 Oct  9 17:34 wrapper_checkpoint.txt
[2025-10-09 17:34:41] -rw-r--r-- 1 boincer umatlas     21063 Oct  9 17:34 stderr.txt
[2025-10-09 17:34:41] HITS file was successfully produced:
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas 177767400 Oct  9 17:33 shared/HITS.pool.root.1
[2025-10-09 17:34:41]  *** Contents of shared directory: ***
[2025-10-09 17:34:41] total 388076
[2025-10-09 17:34:41] -rw-r--r-- 2 boincer umatlas 217329058 Oct  9 15:04 ATLAS.root_0
[2025-10-09 17:34:41] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 15:04 start_atlas.sh
[2025-10-09 17:34:41] -rw-r--r-- 2 boincer umatlas    569673 Oct  9 15:04 input.tar.gz
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas 177767400 Oct  9 17:33 HITS.pool.root.1
[2025-10-09 17:34:41] -rw------- 1 boincer umatlas   1689600 Oct  9 17:34 result.tar.gz
17:34:43 (2154531): run_atlas exited; CPU time 65469.361820
17:34:43 (2154531): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN