Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:23:23 (2141576): wrapper (7.7.26015): starting
08:23:23 (2141576): wrapper: running run_atlas (--nthreads 3)
[2025-10-10 08:23:23] Arguments: --nthreads 3
[2025-10-10 08:23:23] Threads: 3
[2025-10-10 08:23:23] Checking for CVMFS
[2025-10-10 08:23:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 08:23:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 08:23:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 08:23:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 08:23:24] 2.9.2.0 2113848 94 49988 151537 1 56 27188680 36864001 0 130560 0 71043 99.995 5182 766 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 08:23:24] CVMFS is ok
[2025-10-10 08:23:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 08:23:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 08:23:24] Further information can be found at the LHC@home message board.
[2025-10-10 08:23:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 08:23:24] Checking for apptainer binary...
[2025-10-10 08:23:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 08:23:24] Running /usr/bin/apptainer --version
[2025-10-10 08:23:24] apptainer version 1.4.1-1.1
[2025-10-10 08:23:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 08:23:24] thA389a
[2025-10-10 08:23:24] apptainer works
[2025-10-10 08:23:24] Set ATHENA_PROC_NUMBER=3
[2025-10-10 08:23:24] Set ATHENA_CORE_NUMBER=3
[2025-10-10 08:23:24] Starting ATLAS job with PandaID=6837347929
[2025-10-10 08:23:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:09:48 (2159037): wrapper (7.7.26015): starting
09:09:48 (2159037): wrapper: running run_atlas (--nthreads 3)
[2025-10-10 09:09:48] Arguments: --nthreads 3
[2025-10-10 09:09:48] Threads: 3
[2025-10-10 09:09:48] This job has been restarted, cleaning up previous attempt
[2025-10-10 09:09:48] Checking for CVMFS
[2025-10-10 09:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 09:09:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 09:09:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 09:09:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 09:09:51] 2.9.2.0 2159162 0 30028 151537 3 1 27189658 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 09:09:51] CVMFS is ok
[2025-10-10 09:09:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 09:09:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 09:09:51] Further information can be found at the LHC@home message board.
[2025-10-10 09:09:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 09:09:51] Checking for apptainer binary...
[2025-10-10 09:09:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 09:09:51] Running /usr/bin/apptainer --version
[2025-10-10 09:09:51] apptainer version 1.4.1-1.1
[2025-10-10 09:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 09:09:52] thA389a
[2025-10-10 09:09:52] apptainer works
[2025-10-10 09:09:52] Set ATHENA_PROC_NUMBER=3
[2025-10-10 09:09:52] Set ATHENA_CORE_NUMBER=3
[2025-10-10 09:09:52] Starting ATLAS job with PandaID=6837347929
[2025-10-10 09:09:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 10:41:33]  *** The last 200 lines of the pilot log: ***
[2025-10-10 10:41:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 10:41:33] 
[2025-10-10 10:41:33] 2025-10-10 08:41:02,938 | INFO     | ***************************************
[2025-10-10 10:41:33] 2025-10-10 08:41:03,442 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 10:41:33] 2025-10-10 08:41:03,454 | INFO     | sufficient remaining disk space (232823717888 B)
[2025-10-10 10:41:33] 2025-10-10 08:41:03,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 10:41:33] 2025-10-10 08:41:03,455 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 10:41:33] 2025-10-10 08:41:03,455 | INFO     | update_server=False
[2025-10-10 10:41:33] 2025-10-10 08:41:03,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 10:41:33] 2025-10-10 08:41:03,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 10:41:33] 2025-10-10 08:41:03,496 | INFO     | all job control threads have been joined
[2025-10-10 10:41:33] 2025-10-10 08:41:03,538 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 10:41:33] 2025-10-10 08:41:03,539 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 10:41:33] 2025-10-10 08:41:03,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 10:41:33] 2025-10-10 08:41:03,539 | INFO     | will abort loop
[2025-10-10 10:41:33] 2025-10-10 08:41:03,688 | INFO     | all data control threads have been joined
[2025-10-10 10:41:33] 2025-10-10 08:41:04,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 10:41:33] 2025-10-10 08:41:04,460 | INFO     | [job] retrieve thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:04,461 | INFO     | [job] queue monitor thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:04,502 | INFO     | [job] control thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:04,545 | INFO     | [job] job monitor thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:04,678 | INFO     | all payload control threads have been joined
[2025-10-10 10:41:33] 2025-10-10 08:41:04,694 | INFO     | [data] control thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:04,734 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:05,080 | INFO     | [payload] failed_post thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:05,340 | INFO     | [data] copytool_in thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:05,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 10:41:33] 2025-10-10 08:41:05,561 | INFO     | [payload] validate_post thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:05,640 | INFO     | [job] validate thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:05,684 | INFO     | [payload] control thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:05,740 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:05,785 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:06,302 | INFO     | [data] copytool_out thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:09,422 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:11,714 | INFO     | [monitor] cgroup control has ended
[2025-10-10 10:41:33] 2025-10-10 08:41:13,700 | INFO     | job.realtimelogging is not enabled
[2025-10-10 10:41:33] 2025-10-10 08:41:14,706 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 10:41:33] 2025-10-10 08:41:16,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186078373696)>', '<ExcThread(monitor, started 140185291441920)>']
[2025-10-10 10:41:33] 2025-10-10 08:41:21,156 | INFO     | all workflow threads have been joined
[2025-10-10 10:41:33] 2025-10-10 08:41:21,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 10:41:33] 2025-10-10 08:41:21,157 | INFO     | traces error code: 0
[2025-10-10 10:41:33] 2025-10-10 08:41:21,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 10:41:33] 2025-10-10 08:41:33,410 | INFO     | PID=2163243 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 10:41:33] 2025-10-10 08:41:33,411 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 10:41:33] 2025-10-10 08:41:33,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 10:41:33] 2025-10-10 08:41:33,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 10:41:33] 2025-10-10 08:41:33,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 10:41:33] 2025-10-10 08:41:33,411 | INFO     | [monitor] control thread has ended
[2025-10-10 10:41:33] 2025-10-10 08:41:33,454 [wrapper] ==== pilot stdout END ====
[2025-10-10 10:41:33] 2025-10-10 08:41:33,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 10:41:33] 2025-10-10 08:41:33,460 [wrapper] pilotpid: 2163243
[2025-10-10 10:41:33] 2025-10-10 08:41:33,462 [wrapper] Pilot exit status: 0
[2025-10-10 10:41:33] 2025-10-10 08:41:33,469 [wrapper] pandaids: 6837347929 6837347929
[2025-10-10 10:41:33] 2025-10-10 08:41:33,486 [wrapper] cleanup supervisor_pilot 2181866 2163244
[2025-10-10 10:41:33] 2025-10-10 08:41:33,490 [wrapper] Test setup, not cleaning
[2025-10-10 10:41:33] 2025-10-10 08:41:33,492 [wrapper] apfmon messages muted
[2025-10-10 10:41:33] 2025-10-10 08:41:33,495 [wrapper] ==== wrapper stdout END ====
[2025-10-10 10:41:33] 2025-10-10 08:41:33,497 [wrapper] ==== wrapper stderr END ====
[2025-10-10 10:41:33]  *** Error codes and diagnostics ***
[2025-10-10 10:41:33]     "exeErrorCode": 0,
[2025-10-10 10:41:33]     "exeErrorDiag": "",
[2025-10-10 10:41:33]     "pilotErrorCode": 0,
[2025-10-10 10:41:33]     "pilotErrorDiag": "",
[2025-10-10 10:41:33]  *** Listing of results directory ***
[2025-10-10 10:41:33] total 622200
[2025-10-10 10:41:33] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc    557409 Oct  9 16:08 pilot3.tar.gz
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc      5112 Oct  9 16:33 queuedata.json
[2025-10-10 10:41:33] -rwx------ 1 boinc boinc     36292 Oct  9 16:33 runpilot2-wrapper.sh
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc       100 Oct 10 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 10:41:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 08:23 run_atlas
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc       105 Oct 10 08:23 job.xml
[2025-10-10 10:41:33] -rw-r--r-- 3 boinc boinc 219933947 Oct 10 08:23 EVNT.46676267._000841.pool.root.1
[2025-10-10 10:41:33] -rw-r--r-- 3 boinc boinc 219933947 Oct 10 08:23 ATLAS.root_0
[2025-10-10 10:41:33] -rw-r--r-- 2 boinc boinc    569673 Oct 10 08:23 input.tar.gz
[2025-10-10 10:41:33] -rw-r--r-- 2 boinc boinc     15120 Oct 10 08:23 start_atlas.sh
[2025-10-10 10:41:33] drwxrwx--x 2 boinc boinc      4096 Oct 10 08:23 shared
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc         0 Oct 10 08:23 boinc_setup_complete
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc         0 Oct 10 08:23 boinc_lockfile
[2025-10-10 10:41:33] -rw------- 1 boinc boinc   1560580 Oct 10 08:23 agis_ddmendpoints.agis.ALL.json
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc      6204 Oct 10 09:09 init_data.xml
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc      2549 Oct 10 09:09 pandaJob.out
[2025-10-10 10:41:33] -rw------- 1 boinc boinc    975446 Oct 10 09:10 agis_schedconf.cvmfs.json
[2025-10-10 10:41:33] -rw------- 1 boinc boinc 191255936 Oct 10 10:40 HITS.46676269._020240.pool.root.1
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc       529 Oct 10 10:40 boinc_task_state.xml
[2025-10-10 10:41:33] -rw------- 1 boinc boinc      1019 Oct 10 10:40 memory_monitor_summary.json
[2025-10-10 10:41:33] -rw------- 1 boinc boinc    259543 Oct 10 10:40 log.46676269._020240.job.log.tgz.1
[2025-10-10 10:41:33] -rw------- 1 boinc boinc      7760 Oct 10 10:41 heartbeat.json
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc      8192 Oct 10 10:41 boinc_mmap_file
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc        27 Oct 10 10:41 wrapper_checkpoint.txt
[2025-10-10 10:41:33] -rw------- 1 boinc boinc       747 Oct 10 10:41 pilotlog.txt
[2025-10-10 10:41:33] -rw------- 1 boinc boinc        97 Oct 10 10:41 pilot_heartbeat.json
[2025-10-10 10:41:33] -rw------- 1 boinc boinc    797220 Oct 10 10:41 log.46676269._020240.job.log.1
[2025-10-10 10:41:33] -rw------- 1 boinc boinc       357 Oct 10 10:41 output.list
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc       620 Oct 10 10:41 runtime_log
[2025-10-10 10:41:33] -rw------- 1 boinc boinc   1075200 Oct 10 10:41 result.tar.gz
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc      8867 Oct 10 10:41 runtime_log.err
[2025-10-10 10:41:33] -rw------- 1 boinc boinc       784 Oct 10 10:41 nhNKDmqs6Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7OaNDmC4sbYn.diag
[2025-10-10 10:41:33] -rw-r--r-- 1 boinc boinc     10478 Oct 10 10:41 stderr.txt
[2025-10-10 10:41:33] HITS file was successfully produced:
[2025-10-10 10:41:33] -rw------- 1 boinc boinc 191255936 Oct 10 10:40 shared/HITS.pool.root.1
[2025-10-10 10:41:33]  *** Contents of shared directory: ***
[2025-10-10 10:41:33] total 403192
[2025-10-10 10:41:33] -rw-r--r-- 3 boinc boinc 219933947 Oct 10 08:23 ATLAS.root_0
[2025-10-10 10:41:33] -rw-r--r-- 2 boinc boinc    569673 Oct 10 08:23 input.tar.gz
[2025-10-10 10:41:33] -rw-r--r-- 2 boinc boinc     15120 Oct 10 08:23 start_atlas.sh
[2025-10-10 10:41:33] -rw------- 1 boinc boinc 191255936 Oct 10 10:40 HITS.pool.root.1
[2025-10-10 10:41:33] -rw------- 1 boinc boinc   1075200 Oct 10 10:41 result.tar.gz
10:41:35 (2159037): run_atlas exited; CPU time 15596.155807
10:41:35 (2159037): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN