Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:29:08 (587221): wrapper (7.7.26015): starting
15:29:08 (587221): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 15:29:08] Arguments: --nthreads 8
[2025-10-09 15:29:08] Threads: 8
[2025-10-09 15:29:08] Checking for CVMFS
[2025-10-09 15:29:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 15:29:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 15:29:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 15:29:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 15:29:09] 2.13.2.0 5060 1780 111848 151521 2 320 28639896 40960000 22272 16776704 0 5683913 99.865 1549764 41504 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 15:29:09] CVMFS is ok
[2025-10-09 15:29:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 15:29:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 15:29:09] Further information can be found at the LHC@home message board.
[2025-10-09 15:29:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 15:29:09] Checking for apptainer binary...
[2025-10-09 15:29:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 15:29:09] Running /usr/bin/apptainer --version
[2025-10-09 15:29:09] apptainer version 1.4.3-1.el9
[2025-10-09 15:29:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 15:29:09] c-212-3.aglt2.org
[2025-10-09 15:29:09] apptainer works
[2025-10-09 15:29:09] Set ATHENA_PROC_NUMBER=8
[2025-10-09 15:29:09] Set ATHENA_CORE_NUMBER=8
[2025-10-09 15:29:09] Starting ATLAS job with PandaID=6830881280
[2025-10-09 15:29:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 17:11:01]  *** The last 200 lines of the pilot log: ***
[2025-10-09 17:11:01]  replicas=None
[2025-10-09 17:11:01]  scope=mc23_13p6TeV
[2025-10-09 17:11:01]  status=None
[2025-10-09 17:11:01]  status_code=0
[2025-10-09 17:11:01]  storage_token=
[2025-10-09 17:11:01]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6830881280/log.46376905._075902.job.log.tgz.1
[2025-10-09 17:11:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/48/log.46376905._075902.job.log.tgz.1
[2025-10-09 17:11:01]  workdir=None
[2025-10-09 17:11:01] ]
[2025-10-09 17:11:01] 2025-10-09 21:09:52,325 | INFO     | transferring file log.46376905._075902.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6830881280/log.46376905._075902.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 17:11:01] 2025-10-09 21:09:52,325 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6830881280/log.46376905._075902.job.log.tgz.1 /tmp/boinchome/slots/2/log.46376905._075902.job
[2025-10-09 17:11:01] 2025-10-09 21:09:52,352 | INFO     | adding to output.list: log.46376905._075902.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/48/log.46376905._075902.job.log.tg
[2025-10-09 17:11:01] 2025-10-09 21:09:52,353 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 17:11:01] 2025-10-09 21:09:52,353 | INFO     | summary of transferred files:
[2025-10-09 17:11:01] 2025-10-09 21:09:52,353 | INFO     |  -- lfn=log.46376905._075902.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 17:11:01] 2025-10-09 21:09:52,353 | INFO     | stage-out finished correctly
[2025-10-09 17:11:01] 2025-10-09 21:09:52,452 | INFO     | time since job start (6010s) is within the limit (172800.0s)
[2025-10-09 17:11:01] 2025-10-09 21:09:52,954 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 17:11:01] 2025-10-09 21:09:54,455 | INFO     | job 6830881280 has state=finished
[2025-10-09 17:11:01] 2025-10-09 21:09:54,475 | INFO     | preparing for final server update for job 6830881280 in state='finished'
[2025-10-09 17:11:01] 2025-10-09 21:09:54,475 | INFO     | this job has now completed (state=finished)
[2025-10-09 17:11:01] 2025-10-09 21:09:54,475 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 17:11:01] 2025-10-09 21:09:54,476 | INFO     | log transfer has been attempted: DONE
[2025-10-09 17:11:01] 2025-10-09 21:09:54,476 | INFO     | job 6830881280 has finished - writing final server update
[2025-10-09 17:11:01] 2025-10-09 21:09:54,475 | INFO     | time since job start (6012s) is within the limit (172800.0s)
[2025-10-09 17:11:01] 2025-10-09 21:09:54,480 | INFO     | total number of processed events: 400 (read)
[2025-10-09 17:11:01] 2025-10-09 21:09:54,471 | INFO     | monitor loop #407: job 0:6830881280 is in state 'finished'
[2025-10-09 17:11:01] 2025-10-09 21:09:54,494 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 17:11:01] 2025-10-09 21:09:54,522 | INFO     | executing command: lscpu
[2025-10-09 17:11:01] 2025-10-09 21:09:54,603 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 17:11:01] 2025-10-09 21:09:56,500 | INFO     | time since job start (6014s) is within the limit (172800.0s)
[2025-10-09 17:11:01] 2025-10-09 21:09:56,999 | INFO     | monitor loop #408: job 0:6830881280 is in state 'finished'
[2025-10-09 17:11:01] 2025-10-09 21:09:56,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 17:11:01] 2025-10-09 21:09:58,518 | INFO     | time since job start (6016s) is within the limit (172800.0s)
[2025-10-09 17:11:01] 2025-10-09 21:09:59,504 | INFO     | monitor loop #409: job 0:6830881280 is in state 'finished'
[2025-10-09 17:11:01] 2025-10-09 21:09:59,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 17:11:01] 2025-10-09 21:09:59,899 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 17:11:01] 2025-10-09 21:09:59,905 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3192.677479166667
[2025-10-09 17:11:01] 2025-10-09 21:09:59,919 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6830881280/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 17:11:01] 2025-10-09 21:09:59,920 | INFO     | extracted standard info from prmon json
[2025-10-09 17:11:01] 2025-10-09 21:09:59,920 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 17:11:01] 2025-10-09 21:09:59,920 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 17:11:01] 2025-10-09 21:09:59,921 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 17:11:01] 2025-10-09 21:09:59,921 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:11:01] 2025-10-09 21:09:59,922 | INFO     | fitting pss+swap vs Time
[2025-10-09 17:11:01] 2025-10-09 21:09:59,923 | INFO     | sum of square deviations: 233650630.5274725
[2025-10-09 17:11:01] 2025-10-09 21:09:59,923 | INFO     | sum of deviations: 2903674957.6813197
[2025-10-09 17:11:01] 2025-10-09 21:09:59,999 | INFO     | mean x: 1760041299.1648352
[2025-10-09 17:11:01] 2025-10-09 21:09:59,999 | INFO     | mean y: 2513636.087912088
[2025-10-09 17:11:01] 2025-10-09 21:09:59,999 | INFO     | -- intersect: -21870262111.756382
[2025-10-09 17:11:01] 2025-10-09 21:09:59,999 | INFO     | intersect: -21870262111.756382
[2025-10-09 17:11:01] 2025-10-09 21:10:00,000 | INFO     | chi2: 0.5894535985686505
[2025-10-09 17:11:01] 2025-10-09 21:10:00,000 | INFO     | -- intersect: -21870262111.756382
[2025-10-09 17:11:01] 2025-10-09 21:10:00,000 | INFO     | current memory leak: 12.43 B/s (using 91 data points, chi2=0.59)
[2025-10-09 17:11:01] 2025-10-09 21:10:00,000 | INFO     | could have reported an average CPU frequency of 3223 MHz (7 samples)
[2025-10-09 17:11:01] 2025-10-09 21:10:00,000 | INFO     | ..............................
[2025-10-09 17:11:01] 2025-10-09 21:10:00,000 | INFO     | . Timing measurements:
[2025-10-09 17:11:01] 2025-10-09 21:10:00,000 | INFO     | . get job = 0 s
[2025-10-09 17:11:01] 2025-10-09 21:10:00,001 | INFO     | . initial setup = 5 s
[2025-10-09 17:11:01] 2025-10-09 21:10:00,001 | INFO     | . payload setup = 18 s
[2025-10-09 17:11:01] 2025-10-09 21:10:00,001 | INFO     | . stage-in = 0 s
[2025-10-09 17:11:01] 2025-10-09 21:10:00,001 | INFO     | . payload execution = 5949 s
[2025-10-09 17:11:01] 2025-10-09 21:10:00,001 | INFO     | . stage-out = 3 s
[2025-10-09 17:11:01] 2025-10-09 21:10:00,001 | INFO     | . log creation = 1 s
[2025-10-09 17:11:01] 2025-10-09 21:10:00,001 | INFO     | ..............................
[2025-10-09 17:11:01] 2025-10-09 21:10:00,147 | INFO     | 
[2025-10-09 17:11:01] 2025-10-09 21:10:00,147 | INFO     | job summary report
[2025-10-09 17:11:01] 2025-10-09 21:10:00,147 | INFO     | --------------------------------------------------
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | PanDA job id: 6830881280
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | task id: 46376905
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | errors: (none)
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | pilot state: finished 
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | transexitcode: 0
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | exeerrorcode: 0
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | exeerrordiag: 
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | exitcode: 0
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | exitmsg: OK
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | cpuconsumptiontime: 26307 s
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | nevents: 400
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | neventsw: 0
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | pid: 599402
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | pgrp: 599402
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | corecount: 8
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | event service: False
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | sizes: {0: 2348589, 1: 2348844, 12: 2348844, 14: 2349134, 23: 2349162, 5970: 2376075, 5974: 2385073, 5975: 2385129, 5982: 2385323}
[2025-10-09 17:11:01] 2025-10-09 21:10:00,148 | INFO     | --------------------------------------------------
[2025-10-09 17:11:01] 2025-10-09 21:10:00,149 | INFO     | 
[2025-10-09 17:11:01] 2025-10-09 21:10:00,149 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | job 6830881280 has completed (purged errors)
[2025-10-09 17:11:01] 2025-10-09 21:10:00,236 | INFO     | overall cleanup function is called
[2025-10-09 17:11:01] 2025-10-09 21:10:01,258 | INFO     | --- collectZombieJob: --- 10, [599402]
[2025-10-09 17:11:01] 2025-10-09 21:10:01,258 | INFO     | zombie collector waiting for pid 599402
[2025-10-09 17:11:01] 2025-10-09 21:10:01,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 17:11:01] 2025-10-09 21:10:01,258 | INFO     | collected zombie processes
[2025-10-09 17:11:01] 2025-10-09 21:10:01,259 | INFO     | will attempt to kill all subprocesses of pid=599402
[2025-10-09 17:11:01] 2025-10-09 21:10:03,347 | INFO     | process IDs to be killed: [599402] (in reverse order)
[2025-10-09 17:11:01] 2025-10-09 21:10:04,209 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 17:11:01] 2025-10-09 21:10:04,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 17:11:01] 2025-10-09 21:10:04,523 | INFO     | did not find any defunct processes belonging to 599402
[2025-10-09 17:11:01] 2025-10-09 21:10:04,717 | INFO     | did not find any defunct processes belonging to 599402
[2025-10-09 17:11:01] 2025-10-09 21:10:04,717 | INFO     | ready for new job
[2025-10-09 17:11:01] 2025-10-09 21:10:04,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 17:11:01] 2025-10-09 21:10:04,719 | INFO     | ***************************************
[2025-10-09 17:11:01] 2025-10-09 21:10:04,734 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 17:11:01] 2025-10-09 21:10:04,734 | INFO     | ***************************************
[2025-10-09 17:11:01] 2025-10-09 21:10:04,734 | INFO     | 
[2025-10-09 17:11:01] 2025-10-09 21:10:04,761 | INFO     | architecture information:
[2025-10-09 17:11:01] 2025-10-09 21:10:04,765 | INFO     | executing command: cat /etc/os-release
[2025-10-09 17:11:01] 2025-10-09 21:10:04,834 | INFO     | cat /etc/os-release:
[2025-10-09 17:11:01] NAME="CentOS Linux"
[2025-10-09 17:11:01] VERSION="7 (Core)"
[2025-10-09 17:11:01] ID="centos"
[2025-10-09 17:11:01] ID_LIKE="rhel fedora"
[2025-10-09 17:11:01] VERSION_ID="7"
[2025-10-09 17:11:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 17:11:01] ANSI_COLOR="0;31"
[2025-10-09 17:11:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 17:11:01] HOME_URL="https://www.centos.org/"
[2025-10-09 17:11:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 17:11:01] 
[2025-10-09 17:11:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 17:11:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 17:11:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 17:11:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 17:11:01] 
[2025-10-09 17:11:01] 2025-10-09 21:10:04,835 | INFO     | ***************************************
[2025-10-09 17:11:01] 2025-10-09 21:10:05,409 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-09 17:11:01] 2025-10-09 21:10:05,539 | INFO     | sufficient remaining disk space (127511035904 B)
[2025-10-09 17:11:01] 2025-10-09 21:10:05,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 17:11:01] 2025-10-09 21:10:05,540 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 17:11:01] 2025-10-09 21:10:05,540 | INFO     | update_server=False
[2025-10-09 17:11:01] 2025-10-09 21:10:05,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 17:11:01] 2025-10-09 21:10:05,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:11:01] 2025-10-09 21:10:05,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 17:11:01] 2025-10-09 21:10:05,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:11:01] 2025-10-09 21:10:05,589 | INFO     | aborting loop
[2025-10-09 17:11:01] 2025-10-09 21:10:05,807 | INFO     | all job control threads have been joined
[2025-10-09 17:11:01] 2025-10-09 21:10:05,992 | INFO     | all data control threads have been joined
[2025-10-09 17:11:01] 2025-10-09 21:10:06,317 | INFO     | all payload control threads have been joined
[2025-10-09 17:11:01] 2025-10-09 21:10:06,548 | INFO     | [job] retrieve thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:06,549 | INFO     | [job] queue monitor thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:06,573 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:06,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:06,595 | INFO     | [job] job monitor thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:06,629 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:06,815 | INFO     | [job] control thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:06,998 | INFO     | [data] control thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:07,351 | INFO     | [payload] control thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:07,579 | INFO     | [data] copytool_out thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:07,599 | INFO     | [payload] failed_post thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:07,642 | INFO     | [data] copytool_in thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:07,648 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:07,679 | INFO     | [job] validate thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:07,795 | INFO     | [payload] validate_post thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:08,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 17:11:01] 2025-10-09 21:10:12,264 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 17:11:01] 2025-10-09 21:10:33,509 | INFO     | PID=591394 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 17:11:01] 2025-10-09 21:10:33,510 | INFO     | .. there are 17 such processes running
[2025-10-09 17:11:01] 2025-10-09 21:10:33,511 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 17:11:01] 2025-10-09 21:10:33,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 17:11:01] 2025-10-09 21:10:33,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 17:11:01] 2025-10-09 21:10:51,609 | INFO     | [monitor] cgroup control has ended
[2025-10-09 17:11:01] 2025-10-09 21:10:52,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741683251008)>', '<ExcThread(monitor, started 139741410334464)>']
[2025-10-09 17:11:01] 2025-10-09 21:10:52,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 17:11:01] 2025-10-09 21:10:52,707 | INFO     | [monitor] control thread has ended
[2025-10-09 17:11:01] 2025-10-09 21:10:57,380 | INFO     | all workflow threads have been joined
[2025-10-09 17:11:01] 2025-10-09 21:10:57,380 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 17:11:01] 2025-10-09 21:10:57,381 | INFO     | traces error code: 0
[2025-10-09 17:11:01] 2025-10-09 21:10:57,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 17:11:01] 2025-10-09 21:11:00,040 [wrapper] ==== pilot stdout END ====
[2025-10-09 17:11:01] 2025-10-09 21:11:00,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 17:11:01] 2025-10-09 21:11:00,086 [wrapper] pilotpid: 591394
[2025-10-09 17:11:01] 2025-10-09 21:11:00,113 [wrapper] Pilot exit status: 0
[2025-10-09 17:11:01] 2025-10-09 21:11:00,147 [wrapper] pandaids: 6830881280
[2025-10-09 17:11:01] 2025-10-09 21:11:00,225 [wrapper] cleanup supervisor_pilot  816014 591395
[2025-10-09 17:11:01] 2025-10-09 21:11:00,230 [wrapper] Test setup, not cleaning
[2025-10-09 17:11:01] 2025-10-09 21:11:00,235 [wrapper] apfmon messages muted
[2025-10-09 17:11:01] 2025-10-09 21:11:00,238 [wrapper] ==== wrapper stdout END ====
[2025-10-09 17:11:01] 2025-10-09 21:11:00,240 [wrapper] ==== wrapper stderr END ====
[2025-10-09 17:11:01]  *** Error codes and diagnostics ***
[2025-10-09 17:11:01]     "exeErrorCode": 0,
[2025-10-09 17:11:01]     "exeErrorDiag": "",
[2025-10-09 17:11:01]     "pilotErrorCode": 0,
[2025-10-09 17:11:01]     "pilotErrorDiag": "",
[2025-10-09 17:11:01]  *** Listing of results directory ***
[2025-10-09 17:11:01] total 382356
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 23:58 pilot3.tar.gz
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 00:11 queuedata.json
[2025-10-09 17:11:01] -rwx------. 1 boincer umatlas     36292 Oct  5 00:11 runpilot2-wrapper.sh
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas       100 Oct  9 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 17:11:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 15:29 run_atlas
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas       105 Oct  9 15:29 job.xml
[2025-10-09 17:11:01] -rw-r--r--. 2 boincer umatlas 213665181 Oct  9 15:29 EVNT.46376901._002770.pool.root.1
[2025-10-09 17:11:01] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 15:29 start_atlas.sh
[2025-10-09 17:11:01] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 15:29 shared
[2025-10-09 17:11:01] -rw-r--r--. 2 boincer umatlas    565602 Oct  9 15:29 input.tar.gz
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas         0 Oct  9 15:29 boinc_lockfile
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas      2519 Oct  9 15:29 pandaJob.out
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas    975454 Oct  9 15:29 agis_schedconf.cvmfs.json
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas   1560401 Oct  9 15:29 agis_ddmendpoints.agis.ALL.json
[2025-10-09 17:11:01] drwx------. 4 boincer umatlas      4096 Oct  9 15:29 pilot3
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas      6944 Oct  9 17:04 init_data.xml
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas       529 Oct  9 17:09 boinc_task_state.xml
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas 171611083 Oct  9 17:09 HITS.46376905._075902.pool.root.1
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas      1045 Oct  9 17:09 memory_monitor_summary.json
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas    356374 Oct  9 17:09 log.46376905._075902.job.log.tgz.1
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas      7812 Oct  9 17:10 heartbeat.json
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas        95 Oct  9 17:10 pilot_heartbeat.json
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 17:10 boinc_mmap_file
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas      4824 Oct  9 17:10 pilotlog.txt
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas        27 Oct  9 17:10 wrapper_checkpoint.txt
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas    823856 Oct  9 17:11 log.46376905._075902.job.log.1
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas       357 Oct  9 17:11 output.list
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas       620 Oct  9 17:11 runtime_log
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas   1198080 Oct  9 17:11 result.tar.gz
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas      8698 Oct  9 17:11 runtime_log.err
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas       655 Oct  9 17:11 MuPKDmxGVP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmE0NNDmQtYDyn.diag
[2025-10-09 17:11:01] -rw-r--r--. 1 boincer umatlas     21879 Oct  9 17:11 stderr.txt
[2025-10-09 17:11:01] HITS file was successfully produced:
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas 171611083 Oct  9 17:09 shared/HITS.pool.root.1
[2025-10-09 17:11:01]  *** Contents of shared directory: ***
[2025-10-09 17:11:01] total 378004
[2025-10-09 17:11:01] -rw-r--r--. 2 boincer umatlas 213665181 Oct  9 15:29 ATLAS.root_0
[2025-10-09 17:11:01] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 15:29 start_atlas.sh
[2025-10-09 17:11:01] -rw-r--r--. 2 boincer umatlas    565602 Oct  9 15:29 input.tar.gz
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas 171611083 Oct  9 17:09 HITS.pool.root.1
[2025-10-09 17:11:01] -rw-------. 1 boincer umatlas   1198080 Oct  9 17:11 result.tar.gz
17:11:03 (587221): run_atlas exited; CPU time 26441.888894
17:11:03 (587221): called boinc_finish(0)

</stderr_txt>
]]>

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