Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:05 (1553613): wrapper (7.7.26015): starting
00:10:05 (1553613): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 00:10:05] Arguments: --nthreads 3
[2025-10-12 00:10:05] Threads: 3
[2025-10-12 00:10:05] Checking for CVMFS
[2025-10-12 00:10:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:10:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:10:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:10:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:10:09] 2.9.2.0 1553808 0 29104 151598 3 1 21035825 36864000 0 130560 0 0 0.000 1291 1122 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 00:10:09] CVMFS is ok
[2025-10-12 00:10:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:10:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:10:09] Further information can be found at the LHC@home message board.
[2025-10-12 00:10:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:10:09] Checking for apptainer binary...
[2025-10-12 00:10:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:10:09] Running /usr/bin/apptainer --version
[2025-10-12 00:10:09] apptainer version 1.4.1-1.1
[2025-10-12 00:10:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:10:09] atlasA215a
[2025-10-12 00:10:09] apptainer works
[2025-10-12 00:10:09] Set ATHENA_PROC_NUMBER=3
[2025-10-12 00:10:09] Set ATHENA_CORE_NUMBER=3
[2025-10-12 00:10:09] Starting ATLAS job with PandaID=6837345984
[2025-10-12 00:10:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:39:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:39:33] 2025-10-11 23:38:24,729 | INFO     | adding to output.list: log.46676269._020020.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/b5/log.46676269._020020.job.log.tg
[2025-10-12 01:39:33] 2025-10-11 23:38:24,730 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 01:39:33] 2025-10-11 23:38:24,730 | INFO     | summary of transferred files:
[2025-10-12 01:39:33] 2025-10-11 23:38:24,730 | INFO     |  -- lfn=log.46676269._020020.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 01:39:33] 2025-10-11 23:38:24,730 | INFO     | stage-out finished correctly
[2025-10-12 01:39:33] 2025-10-11 23:38:24,760 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 01:39:33] 2025-10-11 23:38:25,027 | INFO     | job 6837345984 has state=finished
[2025-10-12 01:39:33] 2025-10-11 23:38:25,028 | INFO     | preparing for final server update for job 6837345984 in state='finished'
[2025-10-12 01:39:33] 2025-10-11 23:38:25,028 | INFO     | this job has now completed (state=finished)
[2025-10-12 01:39:33] 2025-10-11 23:38:25,028 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 01:39:33] 2025-10-11 23:38:25,028 | INFO     | log transfer has been attempted: DONE
[2025-10-12 01:39:33] 2025-10-11 23:38:25,028 | INFO     | job 6837345984 has finished - writing final server update
[2025-10-12 01:39:33] 2025-10-11 23:38:25,029 | INFO     | total number of processed events: 400 (read)
[2025-10-12 01:39:33] 2025-10-11 23:38:25,029 | INFO     | executing command: lscpu
[2025-10-12 01:39:33] 2025-10-11 23:38:25,046 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 01:39:33] 2025-10-11 23:38:25,108 | INFO     | time since job start (5285s) is within the limit (172800.0s)
[2025-10-12 01:39:33] 2025-10-11 23:38:26,181 | INFO     | PID=1557892 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:39:33] 2025-10-11 23:38:27,182 | INFO     | time since job start (5287s) is within the limit (172800.0s)
[2025-10-12 01:39:33] 2025-10-11 23:38:28,225 | WARNING  | process 1564327 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 01:39:33] 2025-10-11 23:38:28,225 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837345984/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:39:33] 2025-10-11 23:38:28,226 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837345984/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:39:33] 2025-10-11 23:38:28,226 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 01:39:33] 2025-10-11 23:38:28,226 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 01:39:33] 2025-10-11 23:38:28,226 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2333573 B
[2025-10-12 01:39:33] 2025-10-11 23:38:28,226 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15550 B
[2025-10-12 01:39:33] 2025-10-11 23:38:28,226 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 01:39:33] 2025-10-11 23:38:29,183 | INFO     | time since job start (5289s) is within the limit (172800.0s)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,092 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 01:39:33] 2025-10-11 23:38:30,096 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3801.6041666666665
[2025-10-12 01:39:33] 2025-10-11 23:38:30,097 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837345984/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,098 | INFO     | extracted standard info from prmon json
[2025-10-12 01:39:33] 2025-10-11 23:38:30,098 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 01:39:33] 2025-10-11 23:38:30,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 01:39:33] 2025-10-11 23:38:30,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:39:33] 2025-10-11 23:38:30,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:39:33] 2025-10-11 23:38:30,099 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | sum of square deviations: 158737860.0
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | sum of deviations: -3078904606.0
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | mean x: 1760223355.5
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | mean y: 2419881.225
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | -- intersect: 34143990120.597794
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | intersect: 34143990120.597794
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | chi2: 0.017343169777189832
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | -- intersect: 34143990120.597794
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | current memory leak: -19.40 B/s (using 80 data points, chi2=0.02)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | could have reported an average CPU frequency of 3843 MHz (6 samples)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | ..............................
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | . Timing measurements:
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | . get job = 0 s
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | . initial setup = 1 s
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | . payload setup = 3 s
[2025-10-12 01:39:33] 2025-10-11 23:38:30,100 | INFO     | . stage-in = 0 s
[2025-10-12 01:39:33] 2025-10-11 23:38:30,101 | INFO     | . payload execution = 5262 s
[2025-10-12 01:39:33] 2025-10-11 23:38:30,101 | INFO     | . stage-out = 0 s
[2025-10-12 01:39:33] 2025-10-11 23:38:30,101 | INFO     | . log creation = 0 s
[2025-10-12 01:39:33] 2025-10-11 23:38:30,101 | INFO     | ..............................
[2025-10-12 01:39:33] 2025-10-11 23:38:30,113 | INFO     | sufficient remaining disk space (383194759168 B)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,118 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | 
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | job summary report
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | --------------------------------------------------
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | PanDA job id: 6837345984
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | task id: 46676269
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | errors: (none)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | pilot state: finished 
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | transexitcode: 0
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | exeerrorcode: 0
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | exeerrordiag: 
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | exitcode: 0
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | exitmsg: OK
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | cpuconsumptiontime: 15032 s
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | nevents: 400
[2025-10-12 01:39:33] 2025-10-11 23:38:30,133 | INFO     | neventsw: 0
[2025-10-12 01:39:33] 2025-10-11 23:38:30,134 | INFO     | pid: 1564327
[2025-10-12 01:39:33] 2025-10-11 23:38:30,134 | INFO     | pgrp: 1564327
[2025-10-12 01:39:33] 2025-10-11 23:38:30,134 | INFO     | corecount: 3
[2025-10-12 01:39:33] 2025-10-11 23:38:30,134 | INFO     | event service: False
[2025-10-12 01:39:33] 2025-10-11 23:38:30,134 | INFO     | sizes: {0: 2348858, 3: 2349120, 11: 2349148, 5269: 2375791, 5271: 2384851, 5276: 2384989}
[2025-10-12 01:39:33] 2025-10-11 23:38:30,134 | INFO     | --------------------------------------------------
[2025-10-12 01:39:33] 2025-10-11 23:38:30,134 | INFO     | 
[2025-10-12 01:39:33] 2025-10-11 23:38:30,134 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 01:39:33] 2025-10-11 23:38:30,137 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6837345984: 2633642 B (within 2537553920 B limit)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,137 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6837345984/HITS.46676269._020020.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,137 | INFO     | total size of present files: 0 B (workdir size: 2633642 B)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,137 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6837345984/HITS.46676269._020020.pool.root.1 since it does not exist
[2025-10-12 01:39:33] 2025-10-11 23:38:30,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | job 6837345984 has completed (purged errors)
[2025-10-12 01:39:33] 2025-10-11 23:38:30,148 | INFO     | overall cleanup function is called
[2025-10-12 01:39:33] 2025-10-11 23:38:30,194 | INFO     | number of running child processes to parent process 1564327: 1
[2025-10-12 01:39:33] 2025-10-11 23:38:30,194 | INFO     | maximum number of monitored processes: 6
[2025-10-12 01:39:33] 2025-10-11 23:38:30,194 | INFO     | aborting job monitoring since job object (job id=6837345984) has expired
[2025-10-12 01:39:33] 2025-10-11 23:38:31,152 | INFO     | --- collectZombieJob: --- 10, [1564327]
[2025-10-12 01:39:33] 2025-10-11 23:38:31,152 | INFO     | zombie collector waiting for pid 1564327
[2025-10-12 01:39:33] 2025-10-11 23:38:31,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:39:33] 2025-10-11 23:38:31,152 | INFO     | collected zombie processes
[2025-10-12 01:39:33] 2025-10-11 23:38:31,152 | INFO     | will attempt to kill all subprocesses of pid=1564327
[2025-10-12 01:39:33] 2025-10-11 23:38:31,206 | INFO     | process IDs to be killed: [1564327] (in reverse order)
[2025-10-12 01:39:33] 2025-10-11 23:38:31,235 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:39:33] 2025-10-11 23:38:31,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:39:33] 2025-10-11 23:38:31,237 | INFO     | did not find any defunct processes belonging to 1564327
[2025-10-12 01:39:33] 2025-10-11 23:38:31,239 | INFO     | did not find any defunct processes belonging to 1564327
[2025-10-12 01:39:33] 2025-10-11 23:38:31,239 | INFO     | ready for new job
[2025-10-12 01:39:33] 2025-10-11 23:38:31,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:39:33] 2025-10-11 23:38:31,240 | INFO     | ***************************************
[2025-10-12 01:39:33] 2025-10-11 23:38:31,240 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:39:33] 2025-10-11 23:38:31,240 | INFO     | ***************************************
[2025-10-12 01:39:33] 2025-10-11 23:38:31,240 | INFO     | 
[2025-10-12 01:39:33] 2025-10-11 23:38:31,240 | INFO     | architecture information:
[2025-10-12 01:39:33] 2025-10-11 23:38:31,240 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:39:33] 2025-10-11 23:38:31,250 | INFO     | cat /etc/os-release:
[2025-10-12 01:39:33] NAME="CentOS Linux"
[2025-10-12 01:39:33] VERSION="7 (Core)"
[2025-10-12 01:39:33] ID="centos"
[2025-10-12 01:39:33] ID_LIKE="rhel fedora"
[2025-10-12 01:39:33] VERSION_ID="7"
[2025-10-12 01:39:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:39:33] ANSI_COLOR="0;31"
[2025-10-12 01:39:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:39:33] HOME_URL="https://www.centos.org/"
[2025-10-12 01:39:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:39:33] 
[2025-10-12 01:39:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:39:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:39:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:39:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:39:33] 
[2025-10-12 01:39:33] 2025-10-11 23:38:31,250 | INFO     | ***************************************
[2025-10-12 01:39:33] 2025-10-11 23:38:31,754 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 01:39:33] 2025-10-11 23:38:31,766 | INFO     | sufficient remaining disk space (383197904896 B)
[2025-10-12 01:39:33] 2025-10-11 23:38:31,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:39:33] 2025-10-11 23:38:31,766 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:39:33] 2025-10-11 23:38:31,766 | INFO     | update_server=False
[2025-10-12 01:39:33] 2025-10-11 23:38:31,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:39:33] 2025-10-11 23:38:31,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:39:33] 2025-10-11 23:38:31,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:39:33] 2025-10-11 23:38:31,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:39:33] 2025-10-11 23:38:31,767 | INFO     | aborting loop
[2025-10-12 01:39:33] 2025-10-11 23:38:31,856 | INFO     | all payload control threads have been joined
[2025-10-12 01:39:33] 2025-10-11 23:38:32,058 | INFO     | all job control threads have been joined
[2025-10-12 01:39:33] 2025-10-11 23:38:32,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:39:33] 2025-10-11 23:38:32,773 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:32,773 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:32,773 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:32,797 | INFO     | all data control threads have been joined
[2025-10-12 01:39:33] 2025-10-11 23:38:32,858 | INFO     | [payload] control thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,063 | INFO     | [job] control thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,242 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,303 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,437 | INFO     | [job] validate thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,529 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,561 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,802 | INFO     | [data] control thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,874 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:33,958 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:34,778 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:35,773 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:38:42,781 | INFO     | job.realtimelogging is not enabled
[2025-10-12 01:39:33] 2025-10-11 23:38:43,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:39:33] 2025-10-11 23:39:02,324 | INFO     | PID=1557892 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:39:33] 2025-10-11 23:39:02,325 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:39:33] 2025-10-11 23:39:02,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:39:33] 2025-10-11 23:39:02,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:39:33] 2025-10-11 23:39:27,450 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:39:33] 2025-10-11 23:39:28,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687804069696)>', '<ExcThread(monitor, started 139686563542784)>']
[2025-10-12 01:39:33] 2025-10-11 23:39:28,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:39:33] 2025-10-11 23:39:28,454 | INFO     | [monitor] control thread has ended
[2025-10-12 01:39:33] 2025-10-11 23:39:33,165 | INFO     | all workflow threads have been joined
[2025-10-12 01:39:33] 2025-10-11 23:39:33,165 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:39:33] 2025-10-11 23:39:33,165 | INFO     | traces error code: 0
[2025-10-12 01:39:33] 2025-10-11 23:39:33,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:39:33] 2025-10-11 23:39:33,217 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:39:33] 2025-10-11 23:39:33,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:39:33] 2025-10-11 23:39:33,223 [wrapper] pilotpid: 1557892
[2025-10-12 01:39:33] 2025-10-11 23:39:33,225 [wrapper] Pilot exit status: 0
[2025-10-12 01:39:33] 2025-10-11 23:39:33,233 [wrapper] pandaids: 6837345984
[2025-10-12 01:39:33] 2025-10-11 23:39:33,254 [wrapper] cleanup supervisor_pilot 1576251 1557893
[2025-10-12 01:39:33] 2025-10-11 23:39:33,257 [wrapper] Test setup, not cleaning
[2025-10-12 01:39:33] 2025-10-11 23:39:33,259 [wrapper] apfmon messages muted
[2025-10-12 01:39:33] 2025-10-11 23:39:33,262 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:39:33] 2025-10-11 23:39:33,264 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:39:33]  *** Error codes and diagnostics ***
[2025-10-12 01:39:33]     "exeErrorCode": 0,
[2025-10-12 01:39:33]     "exeErrorDiag": "",
[2025-10-12 01:39:33]     "pilotErrorCode": 0,
[2025-10-12 01:39:33]     "pilotErrorDiag": "",
[2025-10-12 01:39:33]  *** Listing of results directory ***
[2025-10-12 01:39:33] total 412924
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc    557409 Oct  9 16:08 pilot3.tar.gz
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc      5112 Oct  9 16:21 queuedata.json
[2025-10-12 01:39:33] -rwx------ 1 boinc boinc     36292 Oct  9 16:22 runpilot2-wrapper.sh
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc       100 Oct 12 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:39:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 00:10 run_atlas
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc       105 Oct 12 00:10 job.xml
[2025-10-12 01:39:33] -rw-r--r-- 2 boinc boinc 220522554 Oct 12 00:10 EVNT.46676267._000832.pool.root.1
[2025-10-12 01:39:33] -rw-r--r-- 2 boinc boinc    569679 Oct 12 00:10 input.tar.gz
[2025-10-12 01:39:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 00:10 start_atlas.sh
[2025-10-12 01:39:33] drwxrwx--x 2 boinc boinc      4096 Oct 12 00:10 shared
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc         0 Oct 12 00:10 boinc_setup_complete
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc      6446 Oct 12 00:10 init_data.xml
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc         0 Oct 12 00:10 boinc_lockfile
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc      2549 Oct 12 00:10 pandaJob.out
[2025-10-12 01:39:33] -rw------- 1 boinc boinc    975528 Oct 12 00:10 agis_schedconf.cvmfs.json
[2025-10-12 01:39:33] -rw------- 1 boinc boinc   1560580 Oct 12 00:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:39:33] drwx------ 5 boinc boinc      4096 Oct 12 00:10 pilot3
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc       529 Oct 12 01:38 boinc_task_state.xml
[2025-10-12 01:39:33] -rw------- 1 boinc boinc 196333058 Oct 12 01:38 HITS.46676269._020020.pool.root.1
[2025-10-12 01:39:33] -rw------- 1 boinc boinc      1034 Oct 12 01:38 memory_monitor_summary.json
[2025-10-12 01:39:33] -rw------- 1 boinc boinc    262796 Oct 12 01:38 log.46676269._020020.job.log.tgz.1
[2025-10-12 01:39:33] -rw------- 1 boinc boinc      7763 Oct 12 01:38 heartbeat.json
[2025-10-12 01:39:33] -rw------- 1 boinc boinc        95 Oct 12 01:39 pilot_heartbeat.json
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc      8192 Oct 12 01:39 boinc_mmap_file
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc        27 Oct 12 01:39 wrapper_checkpoint.txt
[2025-10-12 01:39:33] -rw------- 1 boinc boinc      4824 Oct 12 01:39 pilotlog.txt
[2025-10-12 01:39:33] -rw------- 1 boinc boinc    773361 Oct 12 01:39 log.46676269._020020.job.log.1
[2025-10-12 01:39:33] -rw------- 1 boinc boinc       357 Oct 12 01:39 output.list
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc       620 Oct 12 01:39 runtime_log
[2025-10-12 01:39:33] -rw------- 1 boinc boinc   1054720 Oct 12 01:39 result.tar.gz
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc      8797 Oct 12 01:39 runtime_log.err
[2025-10-12 01:39:33] -rw------- 1 boinc boinc       662 Oct 12 01:39 AjHNDmni6Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHMaNDmwD1T9m.diag
[2025-10-12 01:39:33] -rw-r--r-- 1 boinc boinc     22600 Oct 12 01:39 stderr.txt
[2025-10-12 01:39:33] HITS file was successfully produced:
[2025-10-12 01:39:33] -rw------- 1 boinc boinc 196333058 Oct 12 01:38 shared/HITS.pool.root.1
[2025-10-12 01:39:33]  *** Contents of shared directory: ***
[2025-10-12 01:39:33] total 408704
[2025-10-12 01:39:33] -rw-r--r-- 2 boinc boinc 220522554 Oct 12 00:10 ATLAS.root_0
[2025-10-12 01:39:33] -rw-r--r-- 2 boinc boinc    569679 Oct 12 00:10 input.tar.gz
[2025-10-12 01:39:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 00:10 start_atlas.sh
[2025-10-12 01:39:33] -rw------- 1 boinc boinc 196333058 Oct 12 01:38 HITS.pool.root.1
[2025-10-12 01:39:33] -rw------- 1 boinc boinc   1054720 Oct 12 01:39 result.tar.gz
01:39:35 (1553613): run_atlas exited; CPU time 15056.474675
01:39:35 (1553613): called boinc_finish(0)

</stderr_txt>
]]>

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