Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:13:26 (564106): wrapper (7.7.26015): starting
14:13:26 (564106): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 14:13:26] Arguments: --nthreads 8
[2025-10-09 14:13:26] Threads: 8
[2025-10-09 14:13:26] Checking for CVMFS
[2025-10-09 14:13:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 14:13:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 14:13:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 14:13:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 14:13:26] 2.13.1.0 4140 262 60164 151519 1 57 31087948 39288832 2840 16776704 0 904325 99.998 8048 35928 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 14:13:26] CVMFS is ok
[2025-10-09 14:13:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 14:13:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 14:13:26] Further information can be found at the LHC@home message board.
[2025-10-09 14:13:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 14:13:26] Checking for apptainer binary...
[2025-10-09 14:13:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 14:13:26] Running /usr/bin/apptainer --version
[2025-10-09 14:13:26] apptainer version 1.4.3-1.el9
[2025-10-09 14:13:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 14:13:26] c-210-16.aglt2.org
[2025-10-09 14:13:26] apptainer works
[2025-10-09 14:13:26] Set ATHENA_PROC_NUMBER=8
[2025-10-09 14:13:26] Set ATHENA_CORE_NUMBER=8
[2025-10-09 14:13:27] Starting ATLAS job with PandaID=6832634161
[2025-10-09 14:13:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 15:44:52]  *** The last 200 lines of the pilot log: ***
[2025-10-09 15:44:52]  replicas=None
[2025-10-09 15:44:52]  scope=mc23_13p6TeV
[2025-10-09 15:44:52]  status=None
[2025-10-09 15:44:52]  status_code=0
[2025-10-09 15:44:52]  storage_token=
[2025-10-09 15:44:52]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6832634161/log.46376905._109669.job.log.tgz.1
[2025-10-09 15:44:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/3c/log.46376905._109669.job.log.tgz.1
[2025-10-09 15:44:52]  workdir=None
[2025-10-09 15:44:52] ]
[2025-10-09 15:44:52] 2025-10-09 19:44:12,545 | INFO     | transferring file log.46376905._109669.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6832634161/log.46376905._109669.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 15:44:52] 2025-10-09 19:44:12,545 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6832634161/log.46376905._109669.job.log.tgz.1 /tmp/boinchome/slots/3/log.46376905._109669.job
[2025-10-09 15:44:52] 2025-10-09 19:44:12,562 | INFO     | adding to output.list: log.46376905._109669.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/3c/log.46376905._109669.job.log.tg
[2025-10-09 15:44:52] 2025-10-09 19:44:12,563 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 15:44:52] 2025-10-09 19:44:12,563 | INFO     | summary of transferred files:
[2025-10-09 15:44:52] 2025-10-09 19:44:12,563 | INFO     |  -- lfn=log.46376905._109669.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 15:44:52] 2025-10-09 19:44:12,563 | INFO     | stage-out finished correctly
[2025-10-09 15:44:52] 2025-10-09 19:44:13,446 | INFO     | PID=567853 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 15:44:52] 2025-10-09 19:44:13,446 | INFO     | .. there are 5 such processes running
[2025-10-09 15:44:52] 2025-10-09 19:44:14,447 | INFO     | time since job start (5438s) is within the limit (172800.0s)
[2025-10-09 15:44:52] 2025-10-09 19:44:14,516 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 15:44:52] 2025-10-09 19:44:15,682 | INFO     | job 6832634161 has state=finished
[2025-10-09 15:44:52] 2025-10-09 19:44:15,682 | INFO     | preparing for final server update for job 6832634161 in state='finished'
[2025-10-09 15:44:52] 2025-10-09 19:44:15,683 | INFO     | this job has now completed (state=finished)
[2025-10-09 15:44:52] 2025-10-09 19:44:15,683 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 15:44:52] 2025-10-09 19:44:15,683 | INFO     | log transfer has been attempted: DONE
[2025-10-09 15:44:52] 2025-10-09 19:44:15,683 | INFO     | job 6832634161 has finished - writing final server update
[2025-10-09 15:44:52] 2025-10-09 19:44:15,683 | INFO     | total number of processed events: 400 (read)
[2025-10-09 15:44:52] 2025-10-09 19:44:15,684 | INFO     | executing command: lscpu
[2025-10-09 15:44:52] 2025-10-09 19:44:15,723 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 15:44:52] 2025-10-09 19:44:16,452 | INFO     | time since job start (5440s) is within the limit (172800.0s)
[2025-10-09 15:44:52] 2025-10-09 19:44:18,458 | INFO     | time since job start (5442s) is within the limit (172800.0s)
[2025-10-09 15:44:52] 2025-10-09 19:44:18,573 | WARNING  | process 574511 can no longer be monitored (due to stat problems) - aborting
[2025-10-09 15:44:52] 2025-10-09 19:44:18,574 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6832634161/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 15:44:52] 2025-10-09 19:44:18,795 | INFO     | number of running child processes to parent process 574511: 1
[2025-10-09 15:44:52] 2025-10-09 19:44:18,796 | INFO     | maximum number of monitored processes: 6
[2025-10-09 15:44:52] 2025-10-09 19:44:19,236 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 15:44:52] 2025-10-09 19:44:19,242 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.127175
[2025-10-09 15:44:52] 2025-10-09 19:44:19,249 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6832634161/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 15:44:52] 2025-10-09 19:44:19,249 | INFO     | extracted standard info from prmon json
[2025-10-09 15:44:52] 2025-10-09 19:44:19,249 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 15:44:52] 2025-10-09 19:44:19,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 15:44:52] 2025-10-09 19:44:19,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 15:44:52] 2025-10-09 19:44:19,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 15:44:52] 2025-10-09 19:44:19,252 | INFO     | fitting pss+swap vs Time
[2025-10-09 15:44:52] 2025-10-09 19:44:19,253 | INFO     | sum of square deviations: 170944600.5
[2025-10-09 15:44:52] 2025-10-09 19:44:19,253 | INFO     | sum of deviations: -1796038371.9999995
[2025-10-09 15:44:52] 2025-10-09 19:44:19,253 | INFO     | mean x: 1760036415.5
[2025-10-09 15:44:52] 2025-10-09 19:44:19,253 | INFO     | mean y: 2538045.56097561
[2025-10-09 15:44:52] 2025-10-09 19:44:19,254 | INFO     | -- intersect: 18494452555.345882
[2025-10-09 15:44:52] 2025-10-09 19:44:19,254 | INFO     | intersect: 18494452555.345882
[2025-10-09 15:44:52] 2025-10-09 19:44:19,254 | INFO     | chi2: 0.0044165876038046396
[2025-10-09 15:44:52] 2025-10-09 19:44:19,254 | INFO     | -- intersect: 18494452555.345882
[2025-10-09 15:44:52] 2025-10-09 19:44:19,254 | INFO     | current memory leak: -10.51 B/s (using 82 data points, chi2=0.00)
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | could have reported an average CPU frequency of 2640 MHz (6 samples)
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | ..............................
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | . Timing measurements:
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | . get job = 0 s
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | . initial setup = 2 s
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | . payload setup = 4 s
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | . stage-in = 0 s
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | . payload execution = 5411 s
[2025-10-09 15:44:52] 2025-10-09 19:44:19,255 | INFO     | . stage-out = 0 s
[2025-10-09 15:44:52] 2025-10-09 19:44:19,256 | INFO     | . log creation = 0 s
[2025-10-09 15:44:52] 2025-10-09 19:44:19,256 | INFO     | ..............................
[2025-10-09 15:44:52] 2025-10-09 19:44:19,866 | INFO     | 
[2025-10-09 15:44:52] 2025-10-09 19:44:19,866 | INFO     | job summary report
[2025-10-09 15:44:52] 2025-10-09 19:44:19,866 | INFO     | --------------------------------------------------
[2025-10-09 15:44:52] 2025-10-09 19:44:19,866 | INFO     | PanDA job id: 6832634161
[2025-10-09 15:44:52] 2025-10-09 19:44:19,867 | INFO     | task id: 46376905
[2025-10-09 15:44:52] 2025-10-09 19:44:19,867 | INFO     | errors: (none)
[2025-10-09 15:44:52] 2025-10-09 19:44:19,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 15:44:52] 2025-10-09 19:44:19,867 | INFO     | pilot state: finished 
[2025-10-09 15:44:52] 2025-10-09 19:44:19,867 | INFO     | transexitcode: 0
[2025-10-09 15:44:52] 2025-10-09 19:44:19,867 | INFO     | exeerrorcode: 0
[2025-10-09 15:44:52] 2025-10-09 19:44:19,867 | INFO     | exeerrordiag: 
[2025-10-09 15:44:52] 2025-10-09 19:44:19,867 | INFO     | exitcode: 0
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | exitmsg: OK
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | cpuconsumptiontime: 39988 s
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | nevents: 400
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | neventsw: 0
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | pid: 574511
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | pgrp: 574511
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | corecount: 8
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | event service: False
[2025-10-09 15:44:52] 2025-10-09 19:44:19,868 | INFO     | sizes: {0: 2348820, 4: 2349082, 11: 2349110, 5420: 2375702, 5421: 2384700, 5423: 2384756, 5428: 2385078}
[2025-10-09 15:44:52] 2025-10-09 19:44:19,869 | INFO     | --------------------------------------------------
[2025-10-09 15:44:52] 2025-10-09 19:44:19,869 | INFO     | 
[2025-10-09 15:44:52] 2025-10-09 19:44:19,869 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-09 15:44:52] 2025-10-09 19:44:19,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,886 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 15:44:52] 2025-10-09 19:44:19,888 | INFO     | job 6832634161 has completed (purged errors)
[2025-10-09 15:44:52] 2025-10-09 19:44:19,889 | INFO     | overall cleanup function is called
[2025-10-09 15:44:52] 2025-10-09 19:44:20,896 | INFO     | --- collectZombieJob: --- 10, [574511]
[2025-10-09 15:44:52] 2025-10-09 19:44:20,897 | INFO     | zombie collector waiting for pid 574511
[2025-10-09 15:44:52] 2025-10-09 19:44:20,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 15:44:52] 2025-10-09 19:44:20,897 | INFO     | collected zombie processes
[2025-10-09 15:44:52] 2025-10-09 19:44:20,897 | INFO     | will attempt to kill all subprocesses of pid=574511
[2025-10-09 15:44:52] 2025-10-09 19:44:21,121 | INFO     | process IDs to be killed: [574511] (in reverse order)
[2025-10-09 15:44:52] 2025-10-09 19:44:21,183 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 15:44:52] 2025-10-09 19:44:21,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 15:44:52] 2025-10-09 19:44:21,190 | INFO     | did not find any defunct processes belonging to 574511
[2025-10-09 15:44:52] 2025-10-09 19:44:21,196 | INFO     | did not find any defunct processes belonging to 574511
[2025-10-09 15:44:52] 2025-10-09 19:44:21,196 | INFO     | ready for new job
[2025-10-09 15:44:52] 2025-10-09 19:44:21,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 15:44:52] 2025-10-09 19:44:21,198 | INFO     | ***************************************
[2025-10-09 15:44:52] 2025-10-09 19:44:21,198 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 15:44:52] 2025-10-09 19:44:21,198 | INFO     | ***************************************
[2025-10-09 15:44:52] 2025-10-09 19:44:21,198 | INFO     | 
[2025-10-09 15:44:52] 2025-10-09 19:44:21,200 | INFO     | architecture information:
[2025-10-09 15:44:52] 2025-10-09 19:44:21,201 | INFO     | executing command: cat /etc/os-release
[2025-10-09 15:44:52] 2025-10-09 19:44:21,213 | INFO     | cat /etc/os-release:
[2025-10-09 15:44:52] NAME="CentOS Linux"
[2025-10-09 15:44:52] VERSION="7 (Core)"
[2025-10-09 15:44:52] ID="centos"
[2025-10-09 15:44:52] ID_LIKE="rhel fedora"
[2025-10-09 15:44:52] VERSION_ID="7"
[2025-10-09 15:44:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 15:44:52] ANSI_COLOR="0;31"
[2025-10-09 15:44:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 15:44:52] HOME_URL="https://www.centos.org/"
[2025-10-09 15:44:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 15:44:52] 
[2025-10-09 15:44:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 15:44:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 15:44:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 15:44:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 15:44:52] 
[2025-10-09 15:44:52] 2025-10-09 19:44:21,213 | INFO     | ***************************************
[2025-10-09 15:44:52] 2025-10-09 19:44:21,716 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-09 15:44:52] 2025-10-09 19:44:21,730 | INFO     | sufficient remaining disk space (51722059776 B)
[2025-10-09 15:44:52] 2025-10-09 19:44:21,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 15:44:52] 2025-10-09 19:44:21,731 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 15:44:52] 2025-10-09 19:44:21,731 | INFO     | update_server=False
[2025-10-09 15:44:52] 2025-10-09 19:44:21,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 15:44:52] 2025-10-09 19:44:21,857 | INFO     | all data control threads have been joined
[2025-10-09 15:44:52] 2025-10-09 19:44:21,975 | INFO     | all job control threads have been joined
[2025-10-09 15:44:52] 2025-10-09 19:44:22,061 | INFO     | all payload control threads have been joined
[2025-10-09 15:44:52] 2025-10-09 19:44:22,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 15:44:52] 2025-10-09 19:44:22,301 | INFO     | aborting loop
[2025-10-09 15:44:52] 2025-10-09 19:44:22,737 | INFO     | [job] retrieve thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:22,863 | INFO     | [data] control thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:22,935 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:22,980 | INFO     | [job] control thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:23,067 | INFO     | [payload] control thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:23,180 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:23,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 15:44:52] 2025-10-09 19:44:23,304 | INFO     | [job] job monitor thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:23,313 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:23,325 | INFO     | [data] copytool_in thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:23,957 | INFO     | [payload] validate_post thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:24,057 | INFO     | [payload] failed_post thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:24,099 | INFO     | [job] validate thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:24,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 15:44:52] 2025-10-09 19:44:25,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 15:44:52] 2025-10-09 19:44:25,186 | INFO     | [data] copytool_out thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:25,377 | INFO     | [job] queue monitor thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:29,129 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:32,123 | INFO     | job.realtimelogging is not enabled
[2025-10-09 15:44:52] 2025-10-09 19:44:33,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 15:44:52] 2025-10-09 19:44:45,202 | INFO     | [monitor] cgroup control has ended
[2025-10-09 15:44:52] 2025-10-09 19:44:45,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734796646208)>', '<ExcThread(monitor, started 139734294697728)>']
[2025-10-09 15:44:52] 2025-10-09 19:44:50,554 | INFO     | all workflow threads have been joined
[2025-10-09 15:44:52] 2025-10-09 19:44:50,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 15:44:52] 2025-10-09 19:44:50,554 | INFO     | traces error code: 0
[2025-10-09 15:44:52] 2025-10-09 19:44:50,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 15:44:52] 2025-10-09 19:44:51,814 | INFO     | PID=567853 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 15:44:52] 2025-10-09 19:44:51,815 | INFO     | .. there are 5 such processes running
[2025-10-09 15:44:52] 2025-10-09 19:44:51,816 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 15:44:52] 2025-10-09 19:44:51,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 15:44:52] 2025-10-09 19:44:51,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 15:44:52] 2025-10-09 19:44:51,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 15:44:52] 2025-10-09 19:44:51,816 | INFO     | [monitor] control thread has ended
[2025-10-09 15:44:52] 2025-10-09 19:44:51,930 [wrapper] ==== pilot stdout END ====
[2025-10-09 15:44:52] 2025-10-09 19:44:51,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 15:44:52] 2025-10-09 19:44:51,935 [wrapper] pilotpid: 567853
[2025-10-09 15:44:52] 2025-10-09 19:44:51,937 [wrapper] Pilot exit status: 0
[2025-10-09 15:44:52] 2025-10-09 19:44:51,946 [wrapper] pandaids: 6832634161
[2025-10-09 15:44:52] 2025-10-09 19:44:51,987 [wrapper] cleanup supervisor_pilot  771724 567854
[2025-10-09 15:44:52] 2025-10-09 19:44:51,990 [wrapper] Test setup, not cleaning
[2025-10-09 15:44:52] 2025-10-09 19:44:51,992 [wrapper] apfmon messages muted
[2025-10-09 15:44:52] 2025-10-09 19:44:51,995 [wrapper] ==== wrapper stdout END ====
[2025-10-09 15:44:52] 2025-10-09 19:44:51,997 [wrapper] ==== wrapper stderr END ====
[2025-10-09 15:44:52]  *** Error codes and diagnostics ***
[2025-10-09 15:44:52]     "exeErrorCode": 0,
[2025-10-09 15:44:52]     "exeErrorDiag": "",
[2025-10-09 15:44:52]     "pilotErrorCode": 0,
[2025-10-09 15:44:52]     "pilotErrorDiag": "",
[2025-10-09 15:44:52]  *** Listing of results directory ***
[2025-10-09 15:44:52] total 389636
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 06:10 pilot3.tar.gz
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 06:33 queuedata.json
[2025-10-09 15:44:52] -rwx------. 1 boincer umatlas     36292 Oct  6 06:34 runpilot2-wrapper.sh
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas       100 Oct  9 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 15:44:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 14:13 run_atlas
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas       105 Oct  9 14:13 job.xml
[2025-10-09 15:44:52] -rw-r--r--. 2 boincer umatlas 213247503 Oct  9 14:13 EVNT.46376901._004064.pool.root.1
[2025-10-09 15:44:52] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 14:13 start_atlas.sh
[2025-10-09 15:44:52] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 14:13 shared
[2025-10-09 15:44:52] -rw-r--r--. 2 boincer umatlas    565604 Oct  9 14:13 input.tar.gz
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas         0 Oct  9 14:13 boinc_lockfile
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas      2521 Oct  9 14:13 pandaJob.out
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas    975446 Oct  9 14:13 agis_schedconf.cvmfs.json
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas   1560401 Oct  9 14:13 agis_ddmendpoints.agis.ALL.json
[2025-10-09 15:44:52] drwx------. 4 boincer umatlas      4096 Oct  9 14:13 pilot3
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas      6658 Oct  9 15:36 init_data.xml
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas 179595718 Oct  9 15:43 HITS.46376905._109669.pool.root.1
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas       529 Oct  9 15:43 boinc_task_state.xml
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas      1033 Oct  9 15:44 memory_monitor_summary.json
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas    341565 Oct  9 15:44 log.46376905._109669.job.log.tgz.1
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas      7817 Oct  9 15:44 heartbeat.json
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 15:44 boinc_mmap_file
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas        27 Oct  9 15:44 wrapper_checkpoint.txt
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas        95 Oct  9 15:44 pilot_heartbeat.json
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas       821 Oct  9 15:44 pilotlog.txt
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas    787373 Oct  9 15:44 log.46376905._109669.job.log.1
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas       357 Oct  9 15:44 output.list
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas       620 Oct  9 15:44 runtime_log
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas   1146880 Oct  9 15:44 result.tar.gz
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas      8703 Oct  9 15:44 runtime_log.err
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas       651 Oct  9 15:44 HU0NDmVjxP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlETNDmKQaRYn.diag
[2025-10-09 15:44:52] -rw-r--r--. 1 boincer umatlas     21867 Oct  9 15:44 stderr.txt
[2025-10-09 15:44:52] HITS file was successfully produced:
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas 179595718 Oct  9 15:43 shared/HITS.pool.root.1
[2025-10-09 15:44:52]  *** Contents of shared directory: ***
[2025-10-09 15:44:52] total 385340
[2025-10-09 15:44:52] -rw-r--r--. 2 boincer umatlas 213247503 Oct  9 14:13 ATLAS.root_0
[2025-10-09 15:44:52] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 14:13 start_atlas.sh
[2025-10-09 15:44:52] -rw-r--r--. 2 boincer umatlas    565604 Oct  9 14:13 input.tar.gz
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas 179595718 Oct  9 15:43 HITS.pool.root.1
[2025-10-09 15:44:52] -rw-------. 1 boincer umatlas   1146880 Oct  9 15:44 result.tar.gz
15:44:53 (564106): run_atlas exited; CPU time 40090.500393
15:44:53 (564106): called boinc_finish(0)

</stderr_txt>
]]>

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