Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:13:48 (3877335): wrapper (7.7.26015): starting
15:13:48 (3877335): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 15:13:48] Arguments: --nthreads 8
[2025-10-09 15:13:48] Threads: 8
[2025-10-09 15:13:48] Checking for CVMFS
[2025-10-09 15:13:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 15:13:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 15:13:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 15:13:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 15:13:50] 2.13.2.0 1652498 119903 312428 151520 2 631 31554877 40960000 25179 16776704 0 313419388 99.736 225693256 36244 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 15:13:50] CVMFS is ok
[2025-10-09 15:13:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 15:13:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 15:13:50] Further information can be found at the LHC@home message board.
[2025-10-09 15:13:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 15:13:50] Checking for apptainer binary...
[2025-10-09 15:13:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 15:13:50] Running /usr/bin/apptainer --version
[2025-10-09 15:13:50] apptainer version 1.4.3-1.el9
[2025-10-09 15:13:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 15:13:50] c-212-18.aglt2.org
[2025-10-09 15:13:50] apptainer works
[2025-10-09 15:13:50] Set ATHENA_PROC_NUMBER=8
[2025-10-09 15:13:50] Set ATHENA_CORE_NUMBER=8
[2025-10-09 15:13:50] Starting ATLAS job with PandaID=6836606984
[2025-10-09 15:13:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 17:56:15]  *** The last 200 lines of the pilot log: ***
[2025-10-09 17:56:15] 2025-10-09 21:55:10,260 | INFO     | 9626s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-09 17:56:15] 2025-10-09 21:55:10,337 | INFO     | monitor loop #647: job 0:6836606984 is in state 'finished'
[2025-10-09 17:56:15] 2025-10-09 21:55:10,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 17:56:15] 2025-10-09 21:55:10,932 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 17:56:15] 2025-10-09 21:55:10,945 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3103.1388437499986
[2025-10-09 17:56:15] 2025-10-09 21:55:10,959 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836606984/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 17:56:15] 2025-10-09 21:55:10,960 | INFO     | extracted standard info from prmon json
[2025-10-09 17:56:15] 2025-10-09 21:55:10,960 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 17:56:15] 2025-10-09 21:55:10,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 17:56:15] 2025-10-09 21:55:10,960 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 17:56:15] 2025-10-09 21:55:10,960 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:56:15] 2025-10-09 21:55:10,963 | INFO     | fitting pss+swap vs Time
[2025-10-09 17:56:15] 2025-10-09 21:55:10,963 | INFO     | sum of square deviations: 1154741250.3483841
[2025-10-09 17:56:15] 2025-10-09 21:55:10,964 | INFO     | sum of deviations: 18202991564.80644
[2025-10-09 17:56:15] 2025-10-09 21:55:10,964 | INFO     | mean x: 1760042156.1032257
[2025-10-09 17:56:15] 2025-10-09 21:55:10,964 | INFO     | mean y: 2478996.3870967743
[2025-10-09 17:56:15] 2025-10-09 21:55:10,964 | INFO     | -- intersect: -27742292840.234238
[2025-10-09 17:56:15] 2025-10-09 21:55:10,964 | INFO     | intersect: -27742292840.234238
[2025-10-09 17:56:15] 2025-10-09 21:55:10,964 | INFO     | chi2: 4.331006649075483
[2025-10-09 17:56:15] 2025-10-09 21:55:10,964 | INFO     | sum of square deviations: 1046567357.7933359
[2025-10-09 17:56:15] 2025-10-09 21:55:10,965 | INFO     | sum of deviations: 27821699256.313343
[2025-10-09 17:56:15] 2025-10-09 21:55:10,965 | INFO     | mean x: 1760042003.6066666
[2025-10-09 17:56:15] 2025-10-09 21:55:10,965 | INFO     | mean y: 2492190.8866666667
[2025-10-09 17:56:15] 2025-10-09 21:55:10,965 | INFO     | -- intersect: -46786048401.54155
[2025-10-09 17:56:15] 2025-10-09 21:55:10,965 | INFO     | intersect: -46786048401.54155
[2025-10-09 17:56:15] 2025-10-09 21:55:10,965 | INFO     | chi2: 3.6522983198462797
[2025-10-09 17:56:15] 2025-10-09 21:55:10,965 | INFO     | current chi2=3.6522983198462797 (change=15.670914044292294 %)
[2025-10-09 17:56:15] 2025-10-09 21:55:10,966 | INFO     | right removable region: 149
[2025-10-09 17:56:15] 2025-10-09 21:55:10,966 | INFO     | sum of square deviations: 1046557597.7933359
[2025-10-09 17:56:15] 2025-10-09 21:55:10,966 | INFO     | sum of deviations: -27110033391.533333
[2025-10-09 17:56:15] 2025-10-09 21:55:10,966 | INFO     | mean x: 1760042308.6066666
[2025-10-09 17:56:15] 2025-10-09 21:55:10,967 | INFO     | mean y: 2542591.533333333
[2025-10-09 17:56:15] 2025-10-09 21:55:10,967 | INFO     | -- intersect: 45594687598.59715
[2025-10-09 17:56:15] 2025-10-09 21:55:10,967 | INFO     | intersect: 45594687598.59715
[2025-10-09 17:56:15] 2025-10-09 21:55:10,967 | INFO     | chi2: 0.8531603919721253
[2025-10-09 17:56:15] 2025-10-09 21:55:10,967 | INFO     | current chi2=0.8531603919721253 (change=80.3011063916458 %)
[2025-10-09 17:56:15] 2025-10-09 21:55:10,967 | INFO     | sum of square deviations: 945350820.2344829
[2025-10-09 17:56:15] 2025-10-09 21:55:10,968 | INFO     | sum of deviations: -30454430409.779305
[2025-10-09 17:56:15] 2025-10-09 21:55:10,968 | INFO     | mean x: 1760042461.110345
[2025-10-09 17:56:15] 2025-10-09 21:55:10,968 | INFO     | mean y: 2547492.9862068966
[2025-10-09 17:56:15] 2025-10-09 21:55:10,968 | INFO     | -- intersect: 56702229243.77433
[2025-10-09 17:56:15] 2025-10-09 21:55:10,968 | INFO     | intersect: 56702229243.77433
[2025-10-09 17:56:15] 2025-10-09 21:55:10,968 | INFO     | chi2: 0.7744434465131009
[2025-10-09 17:56:15] 2025-10-09 21:55:10,968 | INFO     | current chi2=0.7744434465131009 (change=9.22651194309033 %)
[2025-10-09 17:56:15] 2025-10-09 21:55:10,969 | INFO     | left removable region: 20
[2025-10-09 17:56:15] 2025-10-09 21:55:10,969 | INFO     | sum of square deviations: 665685095.2558141
[2025-10-09 17:56:15] 2025-10-09 21:55:10,969 | INFO     | sum of deviations: -15245954846.930222
[2025-10-09 17:56:15] 2025-10-09 21:55:10,969 | INFO     | mean x: 1760042583.1162791
[2025-10-09 17:56:15] 2025-10-09 21:55:10,969 | INFO     | mean y: 2556214.0620155036
[2025-10-09 17:56:15] 2025-10-09 21:55:10,969 | INFO     | -- intersect: 40312201032.763336
[2025-10-09 17:56:15] 2025-10-09 21:55:10,969 | INFO     | intersect: 40312201032.763336
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | chi2: 0.028883515130597854
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | -- intersect: 40312201032.763336
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | current memory leak: -22.90 B/s (using 129 data points, chi2=0.03)
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | could have reported an average CPU frequency of 3171 MHz (9 samples)
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | ..............................
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | . Timing measurements:
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | . get job = 0 s
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | . initial setup = 7 s
[2025-10-09 17:56:15] 2025-10-09 21:55:10,970 | INFO     | . payload setup = 51 s
[2025-10-09 17:56:15] 2025-10-09 21:55:10,971 | INFO     | . stage-in = 0 s
[2025-10-09 17:56:15] 2025-10-09 21:55:10,971 | INFO     | . payload execution = 9461 s
[2025-10-09 17:56:15] 2025-10-09 21:55:10,971 | INFO     | . stage-out = 1 s
[2025-10-09 17:56:15] 2025-10-09 21:55:10,971 | INFO     | . log creation = 0 s
[2025-10-09 17:56:15] 2025-10-09 21:55:10,971 | INFO     | ..............................
[2025-10-09 17:56:15] 2025-10-09 21:55:11,046 | INFO     | 
[2025-10-09 17:56:15] 2025-10-09 21:55:11,046 | INFO     | job summary report
[2025-10-09 17:56:15] 2025-10-09 21:55:11,046 | INFO     | --------------------------------------------------
[2025-10-09 17:56:15] 2025-10-09 21:55:11,046 | INFO     | PanDA job id: 6836606984
[2025-10-09 17:56:15] 2025-10-09 21:55:11,046 | INFO     | task id: 46676269
[2025-10-09 17:56:15] 2025-10-09 21:55:11,046 | INFO     | errors: (none)
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | pilot state: finished 
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | transexitcode: 0
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | exeerrorcode: 0
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | exeerrordiag: 
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | exitcode: 0
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | exitmsg: OK
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | cpuconsumptiontime: 31815 s
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | nevents: 400
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | neventsw: 0
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | pid: 3897193
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | pgrp: 3897193
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | corecount: 8
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | event service: False
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | sizes: {0: 2348026, 1: 2348711, 2: 2348910, 13: 2348910, 24: 2348966, 35: 2349412, 46: 2349412, 9516: 2377794, 9517: 2377793, 9519: 2386903, 9534: 2387105}
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | --------------------------------------------------
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | 
[2025-10-09 17:56:15] 2025-10-09 21:55:11,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 17:56:15] 2025-10-09 21:55:11,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 17:56:15] 2025-10-09 21:55:11,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 17:56:15] 2025-10-09 21:55:11,116 | INFO     | job 6836606984 has completed (purged errors)
[2025-10-09 17:56:15] 2025-10-09 21:55:11,116 | INFO     | overall cleanup function is called
[2025-10-09 17:56:15] 2025-10-09 21:55:12,125 | INFO     | --- collectZombieJob: --- 10, [3897193]
[2025-10-09 17:56:15] 2025-10-09 21:55:12,125 | INFO     | zombie collector waiting for pid 3897193
[2025-10-09 17:56:15] 2025-10-09 21:55:12,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 17:56:15] 2025-10-09 21:55:12,125 | INFO     | collected zombie processes
[2025-10-09 17:56:15] 2025-10-09 21:55:12,125 | INFO     | will attempt to kill all subprocesses of pid=3897193
[2025-10-09 17:56:15] 2025-10-09 21:55:12,501 | INFO     | process IDs to be killed: [3897193] (in reverse order)
[2025-10-09 17:56:15] 2025-10-09 21:55:12,648 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 17:56:15] 2025-10-09 21:55:12,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 17:56:15] 2025-10-09 21:55:12,667 | INFO     | did not find any defunct processes belonging to 3897193
[2025-10-09 17:56:15] 2025-10-09 21:55:12,686 | INFO     | did not find any defunct processes belonging to 3897193
[2025-10-09 17:56:15] 2025-10-09 21:55:12,687 | INFO     | ready for new job
[2025-10-09 17:56:15] 2025-10-09 21:55:12,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 17:56:15] 2025-10-09 21:55:12,689 | INFO     | ***************************************
[2025-10-09 17:56:15] 2025-10-09 21:55:12,689 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 17:56:15] 2025-10-09 21:55:12,689 | INFO     | ***************************************
[2025-10-09 17:56:15] 2025-10-09 21:55:12,689 | INFO     | 
[2025-10-09 17:56:15] 2025-10-09 21:55:12,694 | INFO     | architecture information:
[2025-10-09 17:56:15] 2025-10-09 21:55:12,695 | INFO     | executing command: cat /etc/os-release
[2025-10-09 17:56:15] 2025-10-09 21:55:12,734 | INFO     | cat /etc/os-release:
[2025-10-09 17:56:15] NAME="CentOS Linux"
[2025-10-09 17:56:15] VERSION="7 (Core)"
[2025-10-09 17:56:15] ID="centos"
[2025-10-09 17:56:15] ID_LIKE="rhel fedora"
[2025-10-09 17:56:15] VERSION_ID="7"
[2025-10-09 17:56:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 17:56:15] ANSI_COLOR="0;31"
[2025-10-09 17:56:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 17:56:15] HOME_URL="https://www.centos.org/"
[2025-10-09 17:56:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 17:56:15] 
[2025-10-09 17:56:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 17:56:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 17:56:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 17:56:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 17:56:15] 
[2025-10-09 17:56:15] 2025-10-09 21:55:12,734 | INFO     | ***************************************
[2025-10-09 17:56:15] 2025-10-09 21:55:13,238 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 17:56:15] 2025-10-09 21:55:13,282 | INFO     | sufficient remaining disk space (127145082880 B)
[2025-10-09 17:56:15] 2025-10-09 21:55:13,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 17:56:15] 2025-10-09 21:55:13,283 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 17:56:15] 2025-10-09 21:55:13,283 | INFO     | update_server=False
[2025-10-09 17:56:15] 2025-10-09 21:55:13,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 17:56:15] 2025-10-09 21:55:13,284 | INFO     | all payload control threads have been joined
[2025-10-09 17:56:15] 2025-10-09 21:55:13,333 | INFO     | all data control threads have been joined
[2025-10-09 17:56:15] 2025-10-09 21:55:13,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:56:15] 2025-10-09 21:55:13,850 | INFO     | aborting loop
[2025-10-09 17:56:15] 2025-10-09 21:55:13,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 17:56:15] 2025-10-09 21:55:14,248 | INFO     | all job control threads have been joined
[2025-10-09 17:56:15] 2025-10-09 21:55:14,289 | INFO     | [job] retrieve thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:14,290 | INFO     | [payload] control thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:14,345 | INFO     | [data] control thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:14,566 | INFO     | [data] copytool_in thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:14,856 | INFO     | [job] job monitor thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,141 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,255 | INFO     | [job] control thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,608 | INFO     | [payload] validate_post thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,627 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,674 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,729 | INFO     | [payload] failed_post thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,787 | INFO     | [job] validate thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:15,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 17:56:15] 2025-10-09 21:55:15,995 | INFO     | [data] copytool_out thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:16,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:56:15] 2025-10-09 21:55:17,066 | INFO     | [job] queue monitor thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:19,866 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 17:56:15] 2025-10-09 21:55:43,763 | INFO     | PID=3882817 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 17:56:15] 2025-10-09 21:55:43,763 | INFO     | .. there are 25 such processes running
[2025-10-09 17:56:15] 2025-10-09 21:55:43,764 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 17:56:15] 2025-10-09 21:55:43,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 17:56:15] 2025-10-09 21:55:43,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 17:56:15] 2025-10-09 21:56:08,236 | INFO     | [monitor] cgroup control has ended
[2025-10-09 17:56:15] 2025-10-09 21:56:08,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625616209728)>', '<ExcThread(monitor, started 139624722708224)>']
[2025-10-09 17:56:15] 2025-10-09 21:56:08,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 17:56:15] 2025-10-09 21:56:08,938 | INFO     | [monitor] control thread has ended
[2025-10-09 17:56:15] 2025-10-09 21:56:13,827 | INFO     | all workflow threads have been joined
[2025-10-09 17:56:15] 2025-10-09 21:56:13,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 17:56:15] 2025-10-09 21:56:13,828 | INFO     | traces error code: 0
[2025-10-09 17:56:15] 2025-10-09 21:56:13,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 17:56:15] 2025-10-09 21:56:14,092 [wrapper] ==== pilot stdout END ====
[2025-10-09 17:56:15] 2025-10-09 21:56:14,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 17:56:15] 2025-10-09 21:56:14,171 [wrapper] pilotpid: 3882817
[2025-10-09 17:56:15] 2025-10-09 21:56:14,228 [wrapper] Pilot exit status: 0
[2025-10-09 17:56:15] 2025-10-09 21:56:14,460 [wrapper] pandaids: 6836606984
[2025-10-09 17:56:15] 2025-10-09 21:56:14,633 [wrapper] cleanup supervisor_pilot  204386 3882818
[2025-10-09 17:56:15] 2025-10-09 21:56:14,667 [wrapper] Test setup, not cleaning
[2025-10-09 17:56:15] 2025-10-09 21:56:14,797 [wrapper] apfmon messages muted
[2025-10-09 17:56:15] 2025-10-09 21:56:14,829 [wrapper] ==== wrapper stdout END ====
[2025-10-09 17:56:15] 2025-10-09 21:56:14,859 [wrapper] ==== wrapper stderr END ====
[2025-10-09 17:56:15]  *** Error codes and diagnostics ***
[2025-10-09 17:56:15]     "exeErrorCode": 0,
[2025-10-09 17:56:15]     "exeErrorDiag": "",
[2025-10-09 17:56:15]     "pilotErrorCode": 0,
[2025-10-09 17:56:15]     "pilotErrorDiag": "",
[2025-10-09 17:56:15]  *** Listing of results directory ***
[2025-10-09 17:56:15] total 414868
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 19:22 pilot3.tar.gz
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:45 queuedata.json
[2025-10-09 17:56:15] -rwx------. 1 boincer umatlas     36292 Oct  8 19:45 runpilot2-wrapper.sh
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas       100 Oct  9 15:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 17:56:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 15:13 run_atlas
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas       105 Oct  9 15:13 job.xml
[2025-10-09 17:56:15] -rw-r--r--. 2 boincer umatlas 219870005 Oct  9 15:13 EVNT.46676267._000474.pool.root.1
[2025-10-09 17:56:15] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 15:13 start_atlas.sh
[2025-10-09 17:56:15] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 15:13 shared
[2025-10-09 17:56:15] -rw-r--r--. 2 boincer umatlas    569677 Oct  9 15:13 input.tar.gz
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas         0 Oct  9 15:13 boinc_lockfile
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas      2548 Oct  9 15:13 pandaJob.out
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas    975446 Oct  9 15:14 agis_schedconf.cvmfs.json
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas   1560401 Oct  9 15:14 agis_ddmendpoints.agis.ALL.json
[2025-10-09 17:56:15] drwx------. 5 boincer umatlas      4096 Oct  9 15:14 pilot3
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas      6946 Oct  9 17:47 init_data.xml
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas 197734506 Oct  9 17:53 HITS.46676269._011601.pool.root.1
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas       530 Oct  9 17:53 boinc_task_state.xml
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas      1054 Oct  9 17:54 memory_monitor_summary.json
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas    384637 Oct  9 17:54 log.46676269._011601.job.log.tgz.1
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas      7784 Oct  9 17:55 heartbeat.json
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas        95 Oct  9 17:55 pilot_heartbeat.json
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas      4825 Oct  9 17:56 pilotlog.txt
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 17:56 boinc_mmap_file
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas        27 Oct  9 17:56 wrapper_checkpoint.txt
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas   1277652 Oct  9 17:56 log.46676269._011601.job.log.1
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas       357 Oct  9 17:56 output.list
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas       620 Oct  9 17:56 runtime_log
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas   1679360 Oct  9 17:56 result.tar.gz
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas      8703 Oct  9 17:56 runtime_log.err
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas       654 Oct  9 17:56 RtGKDma1sQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrwYNDmLWuQ4n.diag
[2025-10-09 17:56:15] -rw-r--r--. 1 boincer umatlas     21269 Oct  9 17:56 stderr.txt
[2025-10-09 17:56:15] HITS file was successfully produced:
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas 197734506 Oct  9 17:53 shared/HITS.pool.root.1
[2025-10-09 17:56:15]  *** Contents of shared directory: ***
[2025-10-09 17:56:15] total 410044
[2025-10-09 17:56:15] -rw-r--r--. 2 boincer umatlas 219870005 Oct  9 15:13 ATLAS.root_0
[2025-10-09 17:56:15] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 15:13 start_atlas.sh
[2025-10-09 17:56:15] -rw-r--r--. 2 boincer umatlas    569677 Oct  9 15:13 input.tar.gz
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas 197734506 Oct  9 17:53 HITS.pool.root.1
[2025-10-09 17:56:15] -rw-------. 1 boincer umatlas   1679360 Oct  9 17:56 result.tar.gz
17:56:17 (3877335): run_atlas exited; CPU time 32100.846024
17:56:17 (3877335): called boinc_finish(0)

</stderr_txt>
]]>

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