Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:28:53 (1875975): wrapper (7.7.26015): starting
14:28:53 (1875975): wrapper: running run_atlas (--nthreads 10)
[2025-10-09 14:28:53] Arguments: --nthreads 10
[2025-10-09 14:28:53] Threads: 10
[2025-10-09 14:28:53] Checking for CVMFS
[2025-10-09 14:28:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 14:28:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 14:28:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 14:28:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 14:28:55] 2.13.2.0 552491 33048 117464 151520 3 329 29420880 40960001 29618 16776704 0 347032859 99.800 179493314 32893 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 14:28:55] CVMFS is ok
[2025-10-09 14:28:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 14:28:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 14:28:55] Further information can be found at the LHC@home message board.
[2025-10-09 14:28:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 14:28:55] Checking for apptainer binary...
[2025-10-09 14:28:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 14:28:55] Running /usr/bin/apptainer --version
[2025-10-09 14:28:55] apptainer version 1.4.3-1.el9
[2025-10-09 14:28:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 14:28:56] c8-7-5.aglt2.org
[2025-10-09 14:28:56] apptainer works
[2025-10-09 14:28:56] Set ATHENA_PROC_NUMBER=10
[2025-10-09 14:28:56] Set ATHENA_CORE_NUMBER=10
[2025-10-09 14:28:56] Starting ATLAS job with PandaID=6837333752
[2025-10-09 14:28:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 16:12:21]  *** The last 200 lines of the pilot log: ***
[2025-10-09 16:12:21] 2025-10-09 20:10:49,805 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 16:12:21] 2025-10-09 20:10:50,634 | INFO     | time since job start (6045s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:10:50,720 | INFO     | monitor loop #402: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:10:50,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:10:52,641 | INFO     | time since job start (6047s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:10:53,225 | INFO     | monitor loop #403: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:10:53,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:10:54,648 | INFO     | time since job start (6049s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:10:55,738 | INFO     | monitor loop #404: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:10:55,740 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:10:56,655 | INFO     | time since job start (6051s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:10:58,245 | INFO     | monitor loop #405: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:10:58,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:10:58,662 | INFO     | time since job start (6053s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:11:00,671 | INFO     | time since job start (6055s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:11:00,750 | INFO     | monitor loop #406: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:11:00,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:11:02,678 | INFO     | time since job start (6057s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:11:03,255 | INFO     | monitor loop #407: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:11:03,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:11:04,685 | INFO     | time since job start (6059s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:11:05,779 | INFO     | monitor loop #408: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:11:05,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:11:06,692 | INFO     | time since job start (6061s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:11:08,291 | INFO     | monitor loop #409: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:11:08,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:11:08,699 | INFO     | time since job start (6063s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:11:10,706 | INFO     | time since job start (6065s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:11:10,706 | INFO     | 6072s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-09 16:12:21] 2025-10-09 20:11:10,798 | INFO     | monitor loop #410: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:11:10,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:11:12,823 | INFO     | PID=1883505 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 16:12:21] 2025-10-09 20:11:12,823 | INFO     | .. there are 26 such processes running
[2025-10-09 16:12:21] 2025-10-09 20:11:13,311 | INFO     | monitor loop #411: job 0:6837333752 is in state 'finished'
[2025-10-09 16:12:21] 2025-10-09 20:11:13,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 16:12:21] 2025-10-09 20:11:13,827 | INFO     | time since job start (6068s) is within the limit (172800.0s)
[2025-10-09 16:12:21] 2025-10-09 20:11:15,321 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 16:12:21] 2025-10-09 20:11:15,330 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3793.926343750005
[2025-10-09 16:12:21] 2025-10-09 20:11:15,357 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837333752/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 16:12:21] 2025-10-09 20:11:15,358 | INFO     | extracted standard info from prmon json
[2025-10-09 16:12:21] 2025-10-09 20:11:15,358 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 16:12:21] 2025-10-09 20:11:15,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 16:12:21] 2025-10-09 20:11:15,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 16:12:21] 2025-10-09 20:11:15,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 16:12:21] 2025-10-09 20:11:15,363 | INFO     | fitting pss+swap vs Time
[2025-10-09 16:12:21] 2025-10-09 20:11:15,363 | INFO     | sum of square deviations: 226013647.15555575
[2025-10-09 16:12:21] 2025-10-09 20:11:15,363 | INFO     | sum of deviations: -3531533160.3111105
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | mean x: 1760037785.6222222
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | mean y: 2559012.7555555557
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | -- intersect: 27503693928.946945
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | intersect: 27503693928.946945
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | chi2: 0.028047266001804363
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | -- intersect: 27503693928.946945
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | current memory leak: -15.63 B/s (using 90 data points, chi2=0.03)
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | could have reported an average CPU frequency of 3775 MHz (7 samples)
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | ..............................
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | . Timing measurements:
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | . get job = 0 s
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | . initial setup = 6 s
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | . payload setup = 58 s
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | . stage-in = 0 s
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | . payload execution = 5909 s
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | . stage-out = 1 s
[2025-10-09 16:12:21] 2025-10-09 20:11:15,364 | INFO     | . log creation = 0 s
[2025-10-09 16:12:21] 2025-10-09 20:11:15,365 | INFO     | ..............................
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | 
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | job summary report
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | --------------------------------------------------
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | PanDA job id: 6837333752
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | task id: 46676269
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | errors: (none)
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | pilot state: finished 
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | transexitcode: 0
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | exeerrorcode: 0
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | exeerrordiag: 
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | exitcode: 0
[2025-10-09 16:12:21] 2025-10-09 20:11:15,430 | INFO     | exitmsg: OK
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | cpuconsumptiontime: 22504 s
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | nevents: 400
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | neventsw: 0
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | pid: 1903488
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | pgrp: 1903488
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | corecount: 10
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | event service: False
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | sizes: {0: 2348855, 1: 2348855, 11: 2348883, 22: 2348911, 31: 2349201, 33: 2349229, 5972: 2376199, 5974: 2385253, 6001: 2385391}
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | --------------------------------------------------
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | 
[2025-10-09 16:12:21] 2025-10-09 20:11:15,431 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-09 16:12:21] 2025-10-09 20:11:15,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 16:12:21] 2025-10-09 20:11:15,484 | INFO     | job 6837333752 has completed (purged errors)
[2025-10-09 16:12:21] 2025-10-09 20:11:15,484 | INFO     | overall cleanup function is called
[2025-10-09 16:12:21] 2025-10-09 20:11:16,498 | INFO     | --- collectZombieJob: --- 10, [1903488]
[2025-10-09 16:12:21] 2025-10-09 20:11:16,498 | INFO     | zombie collector waiting for pid 1903488
[2025-10-09 16:12:21] 2025-10-09 20:11:16,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 16:12:21] 2025-10-09 20:11:16,498 | INFO     | collected zombie processes
[2025-10-09 16:12:21] 2025-10-09 20:11:16,498 | INFO     | will attempt to kill all subprocesses of pid=1903488
[2025-10-09 16:12:21] 2025-10-09 20:11:17,290 | INFO     | process IDs to be killed: [1903488] (in reverse order)
[2025-10-09 16:12:21] 2025-10-09 20:11:17,797 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 16:12:21] 2025-10-09 20:11:17,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 16:12:21] 2025-10-09 20:11:17,838 | INFO     | did not find any defunct processes belonging to 1903488
[2025-10-09 16:12:21] 2025-10-09 20:11:17,886 | INFO     | did not find any defunct processes belonging to 1903488
[2025-10-09 16:12:21] 2025-10-09 20:11:17,886 | INFO     | ready for new job
[2025-10-09 16:12:21] 2025-10-09 20:11:17,886 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 16:12:21] 2025-10-09 20:11:17,891 | INFO     | ***************************************
[2025-10-09 16:12:21] 2025-10-09 20:11:17,891 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 16:12:21] 2025-10-09 20:11:17,891 | INFO     | ***************************************
[2025-10-09 16:12:21] 2025-10-09 20:11:17,892 | INFO     | 
[2025-10-09 16:12:21] 2025-10-09 20:11:17,910 | INFO     | architecture information:
[2025-10-09 16:12:21] 2025-10-09 20:11:17,914 | INFO     | executing command: cat /etc/os-release
[2025-10-09 16:12:21] 2025-10-09 20:11:17,971 | INFO     | cat /etc/os-release:
[2025-10-09 16:12:21] NAME="CentOS Linux"
[2025-10-09 16:12:21] VERSION="7 (Core)"
[2025-10-09 16:12:21] ID="centos"
[2025-10-09 16:12:21] ID_LIKE="rhel fedora"
[2025-10-09 16:12:21] VERSION_ID="7"
[2025-10-09 16:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 16:12:21] ANSI_COLOR="0;31"
[2025-10-09 16:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 16:12:21] HOME_URL="https://www.centos.org/"
[2025-10-09 16:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 16:12:21] 
[2025-10-09 16:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 16:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 16:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 16:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 16:12:21] 
[2025-10-09 16:12:21] 2025-10-09 20:11:17,971 | INFO     | ***************************************
[2025-10-09 16:12:21] 2025-10-09 20:11:18,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-09 16:12:21] 2025-10-09 20:11:18,542 | INFO     | sufficient remaining disk space (170552983552 B)
[2025-10-09 16:12:21] 2025-10-09 20:11:18,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 16:12:21] 2025-10-09 20:11:18,543 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 16:12:21] 2025-10-09 20:11:18,543 | INFO     | update_server=False
[2025-10-09 16:12:21] 2025-10-09 20:11:18,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 16:12:21] 2025-10-09 20:11:18,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 16:12:21] 2025-10-09 20:11:19,239 | INFO     | all data control threads have been joined
[2025-10-09 16:12:21] 2025-10-09 20:11:19,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 16:12:21] 2025-10-09 20:11:19,332 | INFO     | aborting loop
[2025-10-09 16:12:21] 2025-10-09 20:11:19,457 | INFO     | all payload control threads have been joined
[2025-10-09 16:12:21] 2025-10-09 20:11:19,548 | INFO     | [job] retrieve thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:19,600 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:19,627 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:19,793 | INFO     | [job] validate thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:19,844 | INFO     | all job control threads have been joined
[2025-10-09 16:12:21] 2025-10-09 20:11:19,903 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,230 | INFO     | [data] copytool_in thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,245 | INFO     | [data] control thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,316 | INFO     | [payload] validate_post thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,338 | INFO     | [job] job monitor thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 16:12:21] 2025-10-09 20:11:20,463 | INFO     | [payload] control thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,550 | INFO     | [data] copytool_out thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,646 | INFO     | [payload] failed_post thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,657 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:20,850 | INFO     | [job] control thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:21,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 16:12:21] 2025-10-09 20:11:21,450 | INFO     | [job] queue monitor thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:25,041 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 16:12:21] 2025-10-09 20:11:47,796 | INFO     | PID=1883505 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 16:12:21] 2025-10-09 20:11:47,798 | INFO     | .. there are 26 such processes running
[2025-10-09 16:12:21] 2025-10-09 20:11:47,798 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 16:12:21] 2025-10-09 20:11:47,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 16:12:21] 2025-10-09 20:11:47,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 16:12:21] 2025-10-09 20:12:15,047 | INFO     | [monitor] cgroup control has ended
[2025-10-09 16:12:21] 2025-10-09 20:12:15,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444303763264)>', '<ExcThread(monitor, started 140443677353728)>']
[2025-10-09 16:12:21] 2025-10-09 20:12:15,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 16:12:21] 2025-10-09 20:12:15,977 | INFO     | [monitor] control thread has ended
[2025-10-09 16:12:21] 2025-10-09 20:12:20,255 | INFO     | all workflow threads have been joined
[2025-10-09 16:12:21] 2025-10-09 20:12:20,255 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 16:12:21] 2025-10-09 20:12:20,255 | INFO     | traces error code: 0
[2025-10-09 16:12:21] 2025-10-09 20:12:20,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 16:12:21] 2025-10-09 20:12:20,508 [wrapper] ==== pilot stdout END ====
[2025-10-09 16:12:21] 2025-10-09 20:12:20,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 16:12:21] 2025-10-09 20:12:20,637 [wrapper] pilotpid: 1883505
[2025-10-09 16:12:21] 2025-10-09 20:12:20,652 [wrapper] Pilot exit status: 0
[2025-10-09 16:12:21] 2025-10-09 20:12:20,757 [wrapper] pandaids: 6837333752
[2025-10-09 16:12:21] 2025-10-09 20:12:21,135 [wrapper] cleanup supervisor_pilot 2328983 1883506
[2025-10-09 16:12:21] 2025-10-09 20:12:21,147 [wrapper] Test setup, not cleaning
[2025-10-09 16:12:21] 2025-10-09 20:12:21,166 [wrapper] apfmon messages muted
[2025-10-09 16:12:21] 2025-10-09 20:12:21,189 [wrapper] ==== wrapper stdout END ====
[2025-10-09 16:12:21] 2025-10-09 20:12:21,218 [wrapper] ==== wrapper stderr END ====
[2025-10-09 16:12:21]  *** Error codes and diagnostics ***
[2025-10-09 16:12:21]     "exeErrorCode": 0,
[2025-10-09 16:12:21]     "exeErrorDiag": "",
[2025-10-09 16:12:21]     "pilotErrorCode": 0,
[2025-10-09 16:12:21]     "pilotErrorDiag": "",
[2025-10-09 16:12:21]  *** Listing of results directory ***
[2025-10-09 16:12:21] total 408920
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 07:26 pilot3.tar.gz
[2025-10-09 16:12:21] -rwx------. 1 boincer umatlas     36292 Oct  9 07:35 runpilot2-wrapper.sh
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 07:35 queuedata.json
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas       100 Oct  9 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 16:12:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 14:28 run_atlas
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas       105 Oct  9 14:28 job.xml
[2025-10-09 16:12:21] -rw-r--r--. 2 boincer umatlas 220093831 Oct  9 14:28 EVNT.46676267._000656.pool.root.1
[2025-10-09 16:12:21] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 14:28 start_atlas.sh
[2025-10-09 16:12:21] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 14:28 shared
[2025-10-09 16:12:21] -rw-r--r--. 2 boincer umatlas    569676 Oct  9 14:28 input.tar.gz
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas         0 Oct  9 14:28 boinc_lockfile
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas      2549 Oct  9 14:28 pandaJob.out
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas    975446 Oct  9 14:29 agis_schedconf.cvmfs.json
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas   1560401 Oct  9 14:30 agis_ddmendpoints.agis.ALL.json
[2025-10-09 16:12:21] drwx------. 5 boincer umatlas      4096 Oct  9 14:30 pilot3
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas 192398576 Oct  9 16:09 HITS.46676269._015932.pool.root.1
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas       529 Oct  9 16:09 boinc_task_state.xml
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas      7162 Oct  9 16:10 init_data.xml
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas      1048 Oct  9 16:10 memory_monitor_summary.json
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas    363763 Oct  9 16:10 log.46676269._015932.job.log.tgz.1
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas        95 Oct  9 16:10 pilot_heartbeat.json
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas      7816 Oct  9 16:11 heartbeat.json
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas      4825 Oct  9 16:12 pilotlog.txt
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 16:12 boinc_mmap_file
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas        27 Oct  9 16:12 wrapper_checkpoint.txt
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas    806969 Oct  9 16:12 log.46676269._015932.job.log.1
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas       357 Oct  9 16:12 output.list
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas       620 Oct  9 16:12 runtime_log
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas   1187840 Oct  9 16:12 result.tar.gz
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas      8695 Oct  9 16:12 runtime_log.err
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas       655 Oct  9 16:12 g8EMDmQ63Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVaZNDmnWEcxn.diag
[2025-10-09 16:12:21] -rw-r--r--. 1 boincer umatlas     22462 Oct  9 16:12 stderr.txt
[2025-10-09 16:12:21] HITS file was successfully produced:
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas 192398576 Oct  9 16:09 shared/HITS.pool.root.1
[2025-10-09 16:12:21]  *** Contents of shared directory: ***
[2025-10-09 16:12:21] total 404572
[2025-10-09 16:12:21] -rw-r--r--. 2 boincer umatlas 220093831 Oct  9 14:28 ATLAS.root_0
[2025-10-09 16:12:21] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 14:28 start_atlas.sh
[2025-10-09 16:12:21] -rw-r--r--. 2 boincer umatlas    569676 Oct  9 14:28 input.tar.gz
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas 192398576 Oct  9 16:09 HITS.pool.root.1
[2025-10-09 16:12:21] -rw-------. 1 boincer umatlas   1187840 Oct  9 16:12 result.tar.gz
16:12:23 (1875975): run_atlas exited; CPU time 22678.042225
16:12:23 (1875975): called boinc_finish(0)

</stderr_txt>
]]>

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