Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:22:37 (1082621): wrapper (7.7.26015): starting
14:22:37 (1082621): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 14:22:37] Arguments: --nthreads 8
[2025-10-09 14:22:37] Threads: 8
[2025-10-09 14:22:37] Checking for CVMFS
[2025-10-09 14:22:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 14:22:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 14:22:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 14:22:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 14:22:38] 2.13.2.0 3269412 31761 335876 151520 2 396 30087534 40960001 40258 16776704 0 387392365 99.829 172630923 37064 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 14:22:38] CVMFS is ok
[2025-10-09 14:22:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 14:22:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 14:22:38] Further information can be found at the LHC@home message board.
[2025-10-09 14:22:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 14:22:38] Checking for apptainer binary...
[2025-10-09 14:22:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 14:22:38] Running /usr/bin/apptainer --version
[2025-10-09 14:22:38] apptainer version 1.4.3-1.el9
[2025-10-09 14:22:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 14:22:39] c8-16-2.aglt2.org
[2025-10-09 14:22:39] apptainer works
[2025-10-09 14:22:39] Set ATHENA_PROC_NUMBER=8
[2025-10-09 14:22:39] Set ATHENA_CORE_NUMBER=8
[2025-10-09 14:22:39] Starting ATLAS job with PandaID=6837337240
[2025-10-09 14:22:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 15:31:21]  *** The last 200 lines of the pilot log: ***
[2025-10-09 15:31:21]  workdir=None
[2025-10-09 15:31:21] ]
[2025-10-09 15:31:21] 2025-10-09 19:30:22,018 | INFO     | transferring file log.46676269._017035.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6837337240/log.46676269._017035.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 15:31:21] 2025-10-09 19:30:22,019 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6837337240/log.46676269._017035.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._017035.job
[2025-10-09 15:31:21] 2025-10-09 19:30:22,046 | INFO     | adding to output.list: log.46676269._017035.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/69/log.46676269._017035.job.log.tg
[2025-10-09 15:31:21] 2025-10-09 19:30:22,047 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 15:31:21] 2025-10-09 19:30:22,047 | INFO     | summary of transferred files:
[2025-10-09 15:31:21] 2025-10-09 19:30:22,047 | INFO     |  -- lfn=log.46676269._017035.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 15:31:21] 2025-10-09 19:30:22,047 | INFO     | stage-out finished correctly
[2025-10-09 15:31:21] 2025-10-09 19:30:23,352 | INFO     | time since job start (4036s) is within the limit (172800.0s)
[2025-10-09 15:31:21] 2025-10-09 19:30:23,597 | INFO     | monitor loop #260: job 0:6837337240 is in state 'finished'
[2025-10-09 15:31:21] 2025-10-09 19:30:23,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 15:31:21] 2025-10-09 19:30:24,102 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 15:31:21] 2025-10-09 19:30:24,213 | INFO     | job 6837337240 has state=finished
[2025-10-09 15:31:21] 2025-10-09 19:30:24,213 | INFO     | preparing for final server update for job 6837337240 in state='finished'
[2025-10-09 15:31:21] 2025-10-09 19:30:24,213 | INFO     | this job has now completed (state=finished)
[2025-10-09 15:31:21] 2025-10-09 19:30:24,213 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 15:31:21] 2025-10-09 19:30:24,213 | INFO     | log transfer has been attempted: DONE
[2025-10-09 15:31:21] 2025-10-09 19:30:24,213 | INFO     | job 6837337240 has finished - writing final server update
[2025-10-09 15:31:21] 2025-10-09 19:30:24,214 | INFO     | total number of processed events: 400 (read)
[2025-10-09 15:31:21] 2025-10-09 19:30:24,215 | INFO     | executing command: lscpu
[2025-10-09 15:31:21] 2025-10-09 19:30:24,310 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 15:31:21] 2025-10-09 19:30:25,359 | INFO     | time since job start (4038s) is within the limit (172800.0s)
[2025-10-09 15:31:21] 2025-10-09 19:30:26,103 | INFO     | monitor loop #261: job 0:6837337240 is in state 'finished'
[2025-10-09 15:31:21] 2025-10-09 19:30:26,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 15:31:21] 2025-10-09 19:30:27,365 | INFO     | time since job start (4040s) is within the limit (172800.0s)
[2025-10-09 15:31:21] 2025-10-09 19:30:28,607 | INFO     | monitor loop #262: job 0:6837337240 is in state 'finished'
[2025-10-09 15:31:21] 2025-10-09 19:30:28,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 15:31:21] 2025-10-09 19:30:29,372 | INFO     | time since job start (4042s) is within the limit (172800.0s)
[2025-10-09 15:31:21] 2025-10-09 19:30:31,127 | INFO     | monitor loop #263: job 0:6837337240 is in state 'finished'
[2025-10-09 15:31:21] 2025-10-09 19:30:31,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 15:31:21] 2025-10-09 19:30:31,378 | INFO     | time since job start (4044s) is within the limit (172800.0s)
[2025-10-09 15:31:21] 2025-10-09 19:30:33,387 | INFO     | time since job start (4046s) is within the limit (172800.0s)
[2025-10-09 15:31:21] 2025-10-09 19:30:33,587 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 15:31:21] 2025-10-09 19:30:33,592 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.6926562499957
[2025-10-09 15:31:21] 2025-10-09 19:30:33,608 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6837337240/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 15:31:21] 2025-10-09 19:30:33,609 | INFO     | extracted standard info from prmon json
[2025-10-09 15:31:21] 2025-10-09 19:30:33,609 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 15:31:21] 2025-10-09 19:30:33,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 15:31:21] 2025-10-09 19:30:33,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 15:31:21] 2025-10-09 19:30:33,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | fitting pss+swap vs Time
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | sum of square deviations: 63666310.0
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | sum of deviations: 99187707.99999997
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | mean x: 1760036323.0
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | mean y: 2175982.813559322
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | -- intersect: -2739838889.3396664
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | intersect: -2739838889.3396664
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | chi2: 0.01552157922598367
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | -- intersect: -2739838889.3396664
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | current memory leak: 1.56 B/s (using 59 data points, chi2=0.02)
[2025-10-09 15:31:21] 2025-10-09 19:30:33,610 | INFO     | could have reported an average CPU frequency of 3797 MHz (6 samples)
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | ..............................
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | . Timing measurements:
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | . get job = 0 s
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | . initial setup = 3 s
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | . payload setup = 14 s
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | . stage-in = 0 s
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | . payload execution = 3992 s
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | . stage-out = 0 s
[2025-10-09 15:31:21] 2025-10-09 19:30:33,611 | INFO     | . log creation = 0 s
[2025-10-09 15:31:21] 2025-10-09 19:30:33,612 | INFO     | ..............................
[2025-10-09 15:31:21] 2025-10-09 19:30:33,672 | INFO     | 
[2025-10-09 15:31:21] 2025-10-09 19:30:33,672 | INFO     | job summary report
[2025-10-09 15:31:21] 2025-10-09 19:30:33,672 | INFO     | --------------------------------------------------
[2025-10-09 15:31:21] 2025-10-09 19:30:33,672 | INFO     | PanDA job id: 6837337240
[2025-10-09 15:31:21] 2025-10-09 19:30:33,672 | INFO     | task id: 46676269
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | errors: (none)
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | pilot state: finished 
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | transexitcode: 0
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | exeerrorcode: 0
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | exeerrordiag: 
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | exitcode: 0
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | exitmsg: OK
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | cpuconsumptiontime: 21884 s
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | nevents: 400
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | neventsw: 0
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | pid: 1099053
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | pgrp: 1099053
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | corecount: 8
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | event service: False
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | sizes: {0: 2348684, 1: 2348883, 9: 2349145, 11: 2349173, 4009: 2375043, 4010: 2375042, 4011: 2384224, 4013: 2384280, 4023: 2384474}
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | --------------------------------------------------
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | 
[2025-10-09 15:31:21] 2025-10-09 19:30:33,673 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-09 15:31:21] 2025-10-09 19:30:33,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 15:31:21] 2025-10-09 19:30:33,698 | INFO     | job 6837337240 has completed (purged errors)
[2025-10-09 15:31:21] 2025-10-09 19:30:33,699 | INFO     | overall cleanup function is called
[2025-10-09 15:31:21] 2025-10-09 19:30:34,711 | INFO     | --- collectZombieJob: --- 10, [1099053]
[2025-10-09 15:31:21] 2025-10-09 19:30:34,711 | INFO     | zombie collector waiting for pid 1099053
[2025-10-09 15:31:21] 2025-10-09 19:30:34,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 15:31:21] 2025-10-09 19:30:34,712 | INFO     | collected zombie processes
[2025-10-09 15:31:21] 2025-10-09 19:30:34,712 | INFO     | will attempt to kill all subprocesses of pid=1099053
[2025-10-09 15:31:21] 2025-10-09 19:30:36,046 | INFO     | PID=1086710 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-09 15:31:21] 2025-10-09 19:30:36,046 | INFO     | .. there are 54 such processes running
[2025-10-09 15:31:21] 2025-10-09 19:30:36,282 | INFO     | process IDs to be killed: [1099053] (in reverse order)
[2025-10-09 15:31:21] 2025-10-09 19:30:36,571 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 15:31:21] 2025-10-09 19:30:36,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 15:31:21] 2025-10-09 19:30:36,612 | INFO     | did not find any defunct processes belonging to 1099053
[2025-10-09 15:31:21] 2025-10-09 19:30:36,647 | INFO     | did not find any defunct processes belonging to 1099053
[2025-10-09 15:31:21] 2025-10-09 19:30:36,647 | INFO     | ready for new job
[2025-10-09 15:31:21] 2025-10-09 19:30:36,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 15:31:21] 2025-10-09 19:30:36,649 | INFO     | ***************************************
[2025-10-09 15:31:21] 2025-10-09 19:30:36,649 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 15:31:21] 2025-10-09 19:30:36,649 | INFO     | ***************************************
[2025-10-09 15:31:21] 2025-10-09 19:30:36,650 | INFO     | 
[2025-10-09 15:31:21] 2025-10-09 19:30:36,658 | INFO     | architecture information:
[2025-10-09 15:31:21] 2025-10-09 19:30:36,699 | INFO     | executing command: cat /etc/os-release
[2025-10-09 15:31:21] 2025-10-09 19:30:36,728 | INFO     | cat /etc/os-release:
[2025-10-09 15:31:21] NAME="CentOS Linux"
[2025-10-09 15:31:21] VERSION="7 (Core)"
[2025-10-09 15:31:21] ID="centos"
[2025-10-09 15:31:21] ID_LIKE="rhel fedora"
[2025-10-09 15:31:21] VERSION_ID="7"
[2025-10-09 15:31:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 15:31:21] ANSI_COLOR="0;31"
[2025-10-09 15:31:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 15:31:21] HOME_URL="https://www.centos.org/"
[2025-10-09 15:31:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 15:31:21] 
[2025-10-09 15:31:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 15:31:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 15:31:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 15:31:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 15:31:21] 
[2025-10-09 15:31:21] 2025-10-09 19:30:36,728 | INFO     | ***************************************
[2025-10-09 15:31:21] 2025-10-09 19:30:37,234 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-09 15:31:21] 2025-10-09 19:30:37,260 | INFO     | sufficient remaining disk space (165754699776 B)
[2025-10-09 15:31:21] 2025-10-09 19:30:37,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 15:31:21] 2025-10-09 19:30:37,261 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 15:31:21] 2025-10-09 19:30:37,261 | INFO     | update_server=False
[2025-10-09 15:31:21] 2025-10-09 19:30:37,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 15:31:21] 2025-10-09 19:30:37,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 15:31:21] 2025-10-09 19:30:37,262 | INFO     | aborting loop
[2025-10-09 15:31:21] 2025-10-09 19:30:37,362 | INFO     | all data control threads have been joined
[2025-10-09 15:31:21] 2025-10-09 19:30:37,552 | INFO     | all payload control threads have been joined
[2025-10-09 15:31:21] 2025-10-09 19:30:37,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 15:31:21] 2025-10-09 19:30:38,267 | INFO     | [job] retrieve thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:38,268 | INFO     | [job] job monitor thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:38,335 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:38,368 | INFO     | [data] control thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:38,402 | INFO     | [data] copytool_in thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:38,433 | INFO     | all job control threads have been joined
[2025-10-09 15:31:21] 2025-10-09 19:30:38,442 | INFO     | [payload] failed_post thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:38,558 | INFO     | [payload] control thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:38,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 15:31:21] 2025-10-09 19:30:39,002 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:39,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 15:31:21] 2025-10-09 19:30:39,398 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:39,438 | INFO     | [job] control thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:39,530 | INFO     | [payload] validate_post thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:39,722 | INFO     | [job] validate thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:39,730 | INFO     | [job] queue monitor thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:39,751 | INFO     | [data] copytool_out thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:43,283 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:30:47,885 | INFO     | job.realtimelogging is not enabled
[2025-10-09 15:31:21] 2025-10-09 19:30:48,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 15:31:21] 2025-10-09 19:31:09,051 | INFO     | PID=1086710 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 15:31:21] 2025-10-09 19:31:09,052 | INFO     | .. there are 56 such processes running
[2025-10-09 15:31:21] 2025-10-09 19:31:09,053 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 15:31:21] 2025-10-09 19:31:09,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 15:31:21] 2025-10-09 19:31:09,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 15:31:21] 2025-10-09 19:31:13,624 | INFO     | [monitor] cgroup control has ended
[2025-10-09 15:31:21] 2025-10-09 19:31:14,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885777905472)>', '<ExcThread(monitor, started 139885423859456)>']
[2025-10-09 15:31:21] 2025-10-09 19:31:15,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 15:31:21] 2025-10-09 19:31:15,089 | INFO     | [monitor] control thread has ended
[2025-10-09 15:31:21] 2025-10-09 19:31:19,724 | INFO     | all workflow threads have been joined
[2025-10-09 15:31:21] 2025-10-09 19:31:19,724 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 15:31:21] 2025-10-09 19:31:19,724 | INFO     | traces error code: 0
[2025-10-09 15:31:21] 2025-10-09 19:31:19,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 15:31:21] 2025-10-09 19:31:20,511 [wrapper] ==== pilot stdout END ====
[2025-10-09 15:31:21] 2025-10-09 19:31:20,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 15:31:21] 2025-10-09 19:31:20,593 [wrapper] pilotpid: 1086710
[2025-10-09 15:31:21] 2025-10-09 19:31:20,630 [wrapper] Pilot exit status: 0
[2025-10-09 15:31:21] 2025-10-09 19:31:20,674 [wrapper] pandaids: 6837337240
[2025-10-09 15:31:21] 2025-10-09 19:31:20,827 [wrapper] cleanup supervisor_pilot 1853954 1086711
[2025-10-09 15:31:21] 2025-10-09 19:31:20,834 [wrapper] Test setup, not cleaning
[2025-10-09 15:31:21] 2025-10-09 19:31:20,840 [wrapper] apfmon messages muted
[2025-10-09 15:31:21] 2025-10-09 19:31:20,858 [wrapper] ==== wrapper stdout END ====
[2025-10-09 15:31:21] 2025-10-09 19:31:20,862 [wrapper] ==== wrapper stderr END ====
[2025-10-09 15:31:21]  *** Error codes and diagnostics ***
[2025-10-09 15:31:21]     "exeErrorCode": 0,
[2025-10-09 15:31:21]     "exeErrorDiag": "",
[2025-10-09 15:31:21]     "pilotErrorCode": 0,
[2025-10-09 15:31:21]     "pilotErrorDiag": "",
[2025-10-09 15:31:21]  *** Listing of results directory ***
[2025-10-09 15:31:21] total 402400
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 07:59 pilot3.tar.gz
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 08:20 queuedata.json
[2025-10-09 15:31:21] -rwx------. 1 boincer umatlas     36292 Oct  9 08:20 runpilot2-wrapper.sh
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas       100 Oct  9 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 15:31:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 14:22 run_atlas
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas       105 Oct  9 14:22 job.xml
[2025-10-09 15:31:21] -rw-r--r--. 2 boincer umatlas 218383015 Oct  9 14:22 EVNT.46676267._000705.pool.root.1
[2025-10-09 15:31:21] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 14:22 start_atlas.sh
[2025-10-09 15:31:21] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 14:22 shared
[2025-10-09 15:31:21] -rw-r--r--. 2 boincer umatlas    569685 Oct  9 14:22 input.tar.gz
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas         0 Oct  9 14:22 boinc_lockfile
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas      2549 Oct  9 14:22 pandaJob.out
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas    975446 Oct  9 14:23 agis_schedconf.cvmfs.json
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas   1560401 Oct  9 14:23 agis_ddmendpoints.agis.ALL.json
[2025-10-09 15:31:21] drwx------. 5 boincer umatlas      4096 Oct  9 14:23 pilot3
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas 188024358 Oct  9 15:29 HITS.46676269._017035.pool.root.1
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas       529 Oct  9 15:29 boinc_task_state.xml
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas      1034 Oct  9 15:30 memory_monitor_summary.json
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas      7161 Oct  9 15:30 init_data.xml
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas    309958 Oct  9 15:30 log.46676269._017035.job.log.tgz.1
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas      7778 Oct  9 15:30 heartbeat.json
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas        95 Oct  9 15:31 pilot_heartbeat.json
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 15:31 boinc_mmap_file
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas        27 Oct  9 15:31 wrapper_checkpoint.txt
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas      4897 Oct  9 15:31 pilotlog.txt
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas    562341 Oct  9 15:31 log.46676269._017035.job.log.1
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas       357 Oct  9 15:31 output.list
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas       620 Oct  9 15:31 runtime_log
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas    890880 Oct  9 15:31 result.tar.gz
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas      8698 Oct  9 15:31 runtime_log.err
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas       651 Oct  9 15:31 K2PKDmRo4Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgoZNDm2ApASm.diag
[2025-10-09 15:31:21] -rw-r--r--. 1 boincer umatlas     22364 Oct  9 15:31 stderr.txt
[2025-10-09 15:31:21] HITS file was successfully produced:
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas 188024358 Oct  9 15:29 shared/HITS.pool.root.1
[2025-10-09 15:31:21]  *** Contents of shared directory: ***
[2025-10-09 15:31:21] total 398344
[2025-10-09 15:31:21] -rw-r--r--. 2 boincer umatlas 218383015 Oct  9 14:22 ATLAS.root_0
[2025-10-09 15:31:21] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 14:22 start_atlas.sh
[2025-10-09 15:31:21] -rw-r--r--. 2 boincer umatlas    569685 Oct  9 14:22 input.tar.gz
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas 188024358 Oct  9 15:29 HITS.pool.root.1
[2025-10-09 15:31:21] -rw-------. 1 boincer umatlas    890880 Oct  9 15:31 result.tar.gz
15:31:22 (1082621): run_atlas exited; CPU time 22026.016521
15:31:22 (1082621): called boinc_finish(0)

</stderr_txt>
]]>

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