Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 18:54:06 (11656): vboxwrapper version 26210
2025-10-09 18:54:06 (11656): BOINC client version: 8.0.4
2025-10-09 18:54:07 (11656): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-10-09 18:54:07 (11656): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 18:54:08 (11656): Create VM. (boinc_896280d9abd87b32, slot#0)
2025-10-09 18:54:08 (11656): Setting Memory Size for VM. (4200MB)
2025-10-09 18:54:08 (11656): Setting CPU Count for VM. (2)
2025-10-09 18:54:09 (11656): Setting Chipset Options for VM.
2025-10-09 18:54:09 (11656): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 18:54:09 (11656): Setting Boot Options for VM.
2025-10-09 18:54:10 (11656): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 18:54:10 (11656): Enabling VM Network Access.
2025-10-09 18:54:10 (11656): Disabling USB Support for VM.
2025-10-09 18:54:11 (11656): Disabling COM Port Support for VM.
2025-10-09 18:54:11 (11656): Disabling LPT Port Support for VM.
2025-10-09 18:54:11 (11656): Disabling Audio Support for VM.
2025-10-09 18:54:11 (11656): Disabling Clipboard Support for VM.
2025-10-09 18:54:12 (11656): Disabling Drag and Drop Support for VM.
2025-10-09 18:54:12 (11656): Adding storage controller(s) to VM.
2025-10-09 18:54:12 (11656): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 18:54:14 (11656): Adding VirtualBox Guest Additions to VM.
2025-10-09 18:54:14 (11656): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 18:54:15 (11656): forwarding host port 52997 to guest port 80
2025-10-09 18:54:15 (11656): Enabling remote desktop for VM.
2025-10-09 18:54:15 (11656): Required extension pack not installed, remote desktop not enabled.
2025-10-09 18:54:15 (11656): Enabling shared directory for VM.
2025-10-09 18:54:16 (11656): Starting VM using VBoxManage interface. (boinc_896280d9abd87b32, slot#0)
2025-10-09 18:54:20 (11656): Successfully started VM. (PID = '12228')
2025-10-09 18:54:20 (11656): Reporting VM Process ID to BOINC.
2025-10-09 18:54:20 (11656): Guest Log: BIOS: VirtualBox 7.1.4
2025-10-09 18:54:20 (11656): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 18:54:20 (11656): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 18:54:20 (11656): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 18:54:20 (11656): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 18:54:20 (11656): Detected: Web Application Enabled (http://localhost:52997)
2025-10-09 18:54:20 (11656): Preference change detected
2025-10-09 18:54:20 (11656): Setting CPU throttle for VM. (90%)
2025-10-09 18:54:21 (11656): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 18:54:22 (11656): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 18:54:22 (11656): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 18:54:25 (11656): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 18:54:25 (11656): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 18:54:25 (11656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 18:54:32 (11656): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 18:54:32 (11656): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 18:54:46 (11656): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 18:54:46 (11656): Guest Log: 00:00:00.000108 main     Log opened 2025-10-09T18:54:43.837340000Z
2025-10-09 18:54:46 (11656): Guest Log: 00:00:00.000180 main     OS Product: Linux
2025-10-09 18:54:46 (11656): Guest Log: 00:00:00.000200 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 18:54:46 (11656): Guest Log: 00:00:00.000216 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 18:54:46 (11656): Guest Log: 00:00:00.000231 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 18:54:46 (11656): Guest Log: 00:00:00.000231 main     Process ID: 1272
2025-10-09 18:54:46 (11656): Guest Log: 00:00:00.000232 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 18:54:46 (11656): Guest Log: 00:00:00.001192 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 18:54:46 (11656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 18:54:46 (11656): Guest Log: [INFO] Mounting shared directory
2025-10-09 18:54:46 (11656): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 18:54:49 (11656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 18:54:49 (11656): Guest Log: [INFO] Detected branch: prod
2025-10-09 18:54:49 (11656): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 18:54:49 (11656): Guest Log: Copying input files
2025-10-09 18:54:50 (11656): Guest Log: Copied input files into RunAtlas.
2025-10-09 18:54:50 (11656): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 18:54:50 (11656): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 18:54:50 (11656): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 18:54:50 (11656): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 18:54:56 (11656): Guest Log: 00:00:10.051133 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 673 392 000ns (GuestNow=1 760 032 496 166 464 000 ns GuestLast=1 760 036 083 839 856 000 ns fSetTimeLastLoop=true )
2025-10-09 18:54:59 (11656): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 18:54:59 (11656): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 18:54:59 (11656): Guest Log: 2.6.3.0 1547 0 30136 151518 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 18:55:05 (11656): Guest Log: copied the webapp to /var/www
2025-10-09 18:55:05 (11656): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-09 18:55:05 (11656): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-09 18:55:06 (11656): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 18:55:06 (11656): Guest Log:  *** Starting ATLAS job. (PandaID=6837345624 taskID=46676269) ***
2025-10-09 20:34:23 (11656): Status Report: Elapsed Time: '6000.000000'
2025-10-09 20:34:23 (11656): Status Report: CPU Time: '10352.000000'
2025-10-09 21:37:12 (11656): Guest Log:  *** Job finished ***
2025-10-09 21:37:12 (11656): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:36:28,628 | INFO     | job.realtimelogging is not enabled
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:36:29,629 | INFO     | [payload] run_realtimelog thread has finished
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:00,351 | INFO     | [monitor] cgroup control has ended
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:02,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597788817216)>', '<ExcThread(monitor, started 140597197256448)>']
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:03,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:03,155 | INFO     | [monitor] control thread has ended
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,447 | INFO     | all workflow threads have been joined
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,447 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,447 | INFO     | traces error code: 0
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,573 [wrapper] ==== pilot stdout END ====
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,575 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,578 [wrapper] pilotpid: 5915
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,581 [wrapper] Pilot exit status: 0
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,643 [wrapper] pandaids: 6837345624
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,669 [wrapper] cleanup supervisor_pilot  7134 5916
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,675 [wrapper] Test setup, not cleaning
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,679 [wrapper] apfmon messages muted
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,684 [wrapper] ==== wrapper stdout END ====
2025-10-09 21:37:12 (11656): Guest Log: 2025-10-09 20:37:07,686 [wrapper] ==== wrapper stderr END ====
2025-10-09 21:37:12 (11656): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 21:37:12 (11656): Guest Log:     "exeErrorCode": 0,
2025-10-09 21:37:12 (11656): Guest Log:     "exeErrorDiag": "",
2025-10-09 21:37:12 (11656): Guest Log:     "pilotErrorCode": 0,
2025-10-09 21:37:12 (11656): Guest Log:     "pilotErrorDiag": "",
2025-10-09 21:37:12 (11656): Guest Log:  *** Listing of results directory ***
2025-10-09 21:37:12 (11656): Guest Log: total 201512
2025-10-09 21:37:12 (11656): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 13:56 pilot3.tar.gz
2025-10-09 21:37:12 (11656): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 14:06 queuedata.json
2025-10-09 21:37:12 (11656): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 14:07 runpilot2-wrapper.sh
2025-10-09 21:37:12 (11656): Guest Log: -rwxr-xr-x. 1 atlas atlas      8896 Oct  9 17:54 init_data.xml
2025-10-09 21:37:12 (11656): Guest Log: -rwxr-xr-x. 1 atlas atlas    569682 Oct  9 17:54 input.tar.gz
2025-10-09 21:37:12 (11656): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 17:54 start_atlas.sh
2025-10-09 21:37:12 (11656): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 17:54 EVNT.46676267._000819.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 21:37:12 (11656): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct  9 17:55 pandaJob.out
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas    975446 Oct  9 17:55 agis_schedconf.cvmfs.json
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 17:55 agis_ddmendpoints.agis.ALL.json
2025-10-09 21:37:12 (11656): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 17:55 pilot3
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 20:35 pilot_heartbeat.json
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas 199270907 Oct  9 20:35 HITS.46676269._019698.pool.root.1
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas      1023 Oct  9 20:36 memory_monitor_summary.json
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas    308570 Oct  9 20:36 log.46676269._019698.job.log.tgz.1
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas      7749 Oct  9 20:36 heartbeat.json
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas      4684 Oct  9 20:37 pilotlog.txt
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas   1315373 Oct  9 20:37 log.46676269._019698.job.log.1
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 20:37 output.list
2025-10-09 21:37:12 (11656): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 20:37 runtime_log
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas   1638400 Oct  9 20:37 result.tar.gz
2025-10-09 21:37:12 (11656): Guest Log: -rw-r--r--. 1 atlas atlas      8614 Oct  9 20:37 runtime_log.err
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas       648 Oct  9 20:37 hZkNDmnT6Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmHaNDmLXawBn.diag
2025-10-09 21:37:12 (11656): Guest Log: Looking for outputfile HITS.46676269._019698.pool.root.1
2025-10-09 21:37:12 (11656): Guest Log: HITS file was successfully produced
2025-10-09 21:37:12 (11656): Guest Log: -rw-------. 1 atlas atlas 199270907 Oct  9 20:35 /home/atlas/RunAtlas/HITS.46676269._019698.pool.root.1
2025-10-09 21:37:13 (11656): Guest Log: Successfully finished the ATLAS job!
2025-10-09 21:37:13 (11656): Guest Log: Copying the results back to the shared directory!
2025-10-09 21:37:13 (11656): Guest Log:  *** Contents of shared directory: ***
2025-10-09 21:37:13 (11656): Guest Log: total 411107
2025-10-09 21:37:13 (11656): Guest Log: -rwxrwxrwx. 1 root root 219469165 Oct  9 17:54 ATLAS.root_0
2025-10-09 21:37:13 (11656): Guest Log: -rwxrwxrwx. 1 root root 199270907 Oct  9  2025 HITS.pool.root.1
2025-10-09 21:37:13 (11656): Guest Log: -rwxrwxrwx. 1 root root      8896 Oct  9 17:54 init_data.xml
2025-10-09 21:37:13 (11656): Guest Log: -rwxrwxrwx. 1 root root    569682 Oct  9 17:53 input.tar.gz
2025-10-09 21:37:13 (11656): Guest Log: -rwxrwxrwx. 1 root root   1638400 Oct  9  2025 result.tar.gz
2025-10-09 21:37:13 (11656): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 17:53 start_atlas.sh
2025-10-09 21:37:13 (11656): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 21:37:13 (11656): VM Completion File Detected.
2025-10-09 21:37:13 (11656): Powering off VM.
2025-10-09 21:37:14 (11656): Successfully stopped VM.
2025-10-09 21:37:14 (11656): Deregistering VM. (boinc_896280d9abd87b32, slot#0)
2025-10-09 21:37:14 (11656): Removing network bandwidth throttle group from VM.
2025-10-09 21:37:14 (11656): Removing VM from VirtualBox.
2025-10-09 21:37:19 (11656): called boinc_finish(0)

</stderr_txt>
]]>

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