Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:04:33 (417255): wrapper (7.7.26015): starting
18:04:33 (417255): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 18:04:33] Arguments: --nthreads 8
[2025-10-09 18:04:33] Threads: 8
[2025-10-09 18:04:33] Checking for CVMFS
[2025-10-09 18:04:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 18:04:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 18:04:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 18:04:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 18:04:37] 2.13.2.0 129325 105409 474992 151524 1 27 30140816 39288832 17197 16776704 0 159850111 99.510 209089835 29772 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 18:04:37] CVMFS is ok
[2025-10-09 18:04:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 18:04:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 18:04:37] Further information can be found at the LHC@home message board.
[2025-10-09 18:04:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 18:04:37] Checking for apptainer binary...
[2025-10-09 18:04:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 18:04:37] Running /usr/bin/apptainer --version
[2025-10-09 18:04:37] apptainer version 1.4.3-1.el9
[2025-10-09 18:04:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 18:04:39] c-211-28.aglt2.org
[2025-10-09 18:04:39] apptainer works
[2025-10-09 18:04:40] Set ATHENA_PROC_NUMBER=8
[2025-10-09 18:04:40] Set ATHENA_CORE_NUMBER=8
[2025-10-09 18:04:40] Starting ATLAS job with PandaID=6837345003
[2025-10-09 18:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:43:24]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:43:24] 2025-10-10 11:42:18,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:43:24] 2025-10-10 11:42:18,291 | INFO     | sum of deviations: -34745031205.841896
[2025-10-10 07:43:24] 2025-10-10 11:42:18,291 | INFO     | mean x: 1760072136.9210527
[2025-10-10 07:43:24] 2025-10-10 11:42:18,291 | INFO     | mean y: 2502561.1453634086
[2025-10-10 07:43:24] 2025-10-10 11:42:18,291 | INFO     | -- intersect: 390587748.80183977
[2025-10-10 07:43:24] 2025-10-10 11:42:18,364 | INFO     | intersect: 390587748.80183977
[2025-10-10 07:43:24] 2025-10-10 11:42:18,365 | INFO     | chi2: 8.505501766282142
[2025-10-10 07:43:24] 2025-10-10 11:42:18,366 | INFO     | sum of square deviations: 154635122236.36545
[2025-10-10 07:43:24] 2025-10-10 11:42:18,612 | INFO     | time since job start (48946s) is within the limit (172800.0s)
[2025-10-10 07:43:24] 2025-10-10 11:42:19,017 | INFO     | sum of deviations: 227504947716.97223
[2025-10-10 07:43:24] 2025-10-10 11:42:19,017 | INFO     | mean x: 1760071984.4300127
[2025-10-10 07:43:24] 2025-10-10 11:42:19,017 | INFO     | mean y: 2516147.774274905
[2025-10-10 07:43:24] 2025-10-10 11:42:19,018 | INFO     | -- intersect: -2586967269.736743
[2025-10-10 07:43:24] 2025-10-10 11:42:19,018 | INFO     | intersect: -2586967269.736743
[2025-10-10 07:43:24] 2025-10-10 11:42:19,041 | INFO     | chi2: 4.747668846225414
[2025-10-10 07:43:24] 2025-10-10 11:42:19,041 | INFO     | current chi2=4.747668846225414 (change=44.18120204211447 %)
[2025-10-10 07:43:24] 2025-10-10 11:42:19,042 | INFO     | sum of square deviations: 151728552812.01935
[2025-10-10 07:43:24] 2025-10-10 11:42:19,309 | INFO     | sum of deviations: 279795472749.36035
[2025-10-10 07:43:24] 2025-10-10 11:42:19,309 | INFO     | mean x: 1760071831.928934
[2025-10-10 07:43:24] 2025-10-10 11:42:19,309 | INFO     | mean y: 2518876.98857868
[2025-10-10 07:43:24] 2025-10-10 11:42:19,310 | INFO     | -- intersect: -3243146630.0008087
[2025-10-10 07:43:24] 2025-10-10 11:42:19,310 | INFO     | intersect: -3243146630.0008087
[2025-10-10 07:43:24] 2025-10-10 11:42:19,341 | INFO     | chi2: 3.957698018700248
[2025-10-10 07:43:24] 2025-10-10 11:42:19,341 | INFO     | current chi2=3.957698018700248 (change=16.639130763158096 %)
[2025-10-10 07:43:24] 2025-10-10 11:42:19,342 | INFO     | right removable region: 787
[2025-10-10 07:43:24] 2025-10-10 11:42:19,343 | INFO     | sum of square deviations: 154634527734.08066
[2025-10-10 07:43:24] 2025-10-10 11:42:19,500 | INFO     | sum of deviations: -266508083377.14752
[2025-10-10 07:43:24] 2025-10-10 11:42:19,500 | INFO     | mean x: 1760072289.4274905
[2025-10-10 07:43:24] 2025-10-10 11:42:19,500 | INFO     | mean y: 2514561.3278688523
[2025-10-10 07:43:24] 2025-10-10 11:42:19,500 | INFO     | -- intersect: 3035947645.9957194
[2025-10-10 07:43:24] 2025-10-10 11:42:19,501 | INFO     | intersect: 3035947645.9957194
[2025-10-10 07:43:24] 2025-10-10 11:42:19,502 | INFO     | chi2: 5.495203128507985
[2025-10-10 07:43:24] 2025-10-10 11:42:19,502 | INFO     | current chi2=5.495203128507985 (change=35.39236979184117 %)
[2025-10-10 07:43:24] 2025-10-10 11:42:19,503 | INFO     | sum of square deviations: 151727701679.69925
[2025-10-10 07:43:24] 2025-10-10 11:42:19,679 | INFO     | sum of deviations: -355006702886.54706
[2025-10-10 07:43:24] 2025-10-10 11:42:19,679 | INFO     | mean x: 1760072441.9352791
[2025-10-10 07:43:24] 2025-10-10 11:42:19,679 | INFO     | mean y: 2519198.0088832485
[2025-10-10 07:43:24] 2025-10-10 11:42:19,679 | INFO     | -- intersect: 4120669723.8236337
[2025-10-10 07:43:24] 2025-10-10 11:42:19,708 | INFO     | intersect: 4120669723.8236337
[2025-10-10 07:43:24] 2025-10-10 11:42:19,709 | INFO     | chi2: 4.9829876912755315
[2025-10-10 07:43:24] 2025-10-10 11:42:19,709 | INFO     | current chi2=4.9829876912755315 (change=9.321137458507854 %)
[2025-10-10 07:43:24] 2025-10-10 11:42:19,709 | INFO     | left removable region: 20
[2025-10-10 07:43:24] 2025-10-10 11:42:19,710 | INFO     | sum of square deviations: 139917974407.91647
[2025-10-10 07:43:24] 2025-10-10 11:42:19,802 | INFO     | sum of deviations: -87326961932.33232
[2025-10-10 07:43:24] 2025-10-10 11:42:19,802 | INFO     | mean x: 1760072411.4511082
[2025-10-10 07:43:24] 2025-10-10 11:42:19,802 | INFO     | mean y: 2538496.3911342896
[2025-10-10 07:43:24] 2025-10-10 11:42:19,852 | INFO     | -- intersect: 1101051944.1690269
[2025-10-10 07:43:24] 2025-10-10 11:42:19,852 | INFO     | intersect: 1101051944.1690269
[2025-10-10 07:43:24] 2025-10-10 11:42:19,857 | INFO     | chi2: 0.273135867816395
[2025-10-10 07:43:24] 2025-10-10 11:42:19,858 | INFO     | -- intersect: 1101051944.1690269
[2025-10-10 07:43:24] 2025-10-10 11:42:19,858 | INFO     | current memory leak: -0.62 B/s (using 767 data points, chi2=0.27)
[2025-10-10 07:43:24] 2025-10-10 11:42:19,859 | INFO     | could have reported an average CPU frequency of 2899 MHz (30 samples)
[2025-10-10 07:43:24] 2025-10-10 11:42:19,859 | INFO     | ..............................
[2025-10-10 07:43:24] 2025-10-10 11:42:19,860 | INFO     | . Timing measurements:
[2025-10-10 07:43:24] 2025-10-10 11:42:19,860 | INFO     | . get job = 1 s
[2025-10-10 07:43:24] 2025-10-10 11:42:19,860 | INFO     | . initial setup = 10 s
[2025-10-10 07:43:24] 2025-10-10 11:42:19,860 | INFO     | . payload setup = 71 s
[2025-10-10 07:43:24] 2025-10-10 11:42:19,860 | INFO     | . stage-in = 1 s
[2025-10-10 07:43:24] 2025-10-10 11:42:19,860 | INFO     | . payload execution = 48671 s
[2025-10-10 07:43:24] 2025-10-10 11:42:19,860 | INFO     | . stage-out = 16 s
[2025-10-10 07:43:24] 2025-10-10 11:42:19,874 | INFO     | . log creation = 3 s
[2025-10-10 07:43:24] 2025-10-10 11:42:19,874 | INFO     | ..............................
[2025-10-10 07:43:24] 2025-10-10 11:42:20,648 | INFO     | time since job start (48948s) is within the limit (172800.0s)
[2025-10-10 07:43:24] 2025-10-10 11:42:20,650 | INFO     | 
[2025-10-10 07:43:24] 2025-10-10 11:42:20,650 | INFO     | job summary report
[2025-10-10 07:43:24] 2025-10-10 11:42:20,650 | INFO     | --------------------------------------------------
[2025-10-10 07:43:24] 2025-10-10 11:42:20,650 | INFO     | PanDA job id: 6837345003
[2025-10-10 07:43:24] 2025-10-10 11:42:20,651 | INFO     | task id: 46676269
[2025-10-10 07:43:24] 2025-10-10 11:42:20,651 | INFO     | errors: (none)
[2025-10-10 07:43:24] 2025-10-10 11:42:20,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:43:24] 2025-10-10 11:42:20,651 | INFO     | pilot state: finished 
[2025-10-10 07:43:24] 2025-10-10 11:42:20,651 | INFO     | transexitcode: 0
[2025-10-10 07:43:24] 2025-10-10 11:42:20,651 | INFO     | exeerrorcode: 0
[2025-10-10 07:43:24] 2025-10-10 11:42:20,651 | INFO     | exeerrordiag: 
[2025-10-10 07:43:24] 2025-10-10 11:42:20,652 | INFO     | exitcode: 0
[2025-10-10 07:43:24] 2025-10-10 11:42:20,652 | INFO     | exitmsg: OK
[2025-10-10 07:43:24] 2025-10-10 11:42:20,652 | INFO     | cpuconsumptiontime: 79500 s
[2025-10-10 07:43:24] 2025-10-10 11:42:20,652 | INFO     | nevents: 400
[2025-10-10 07:43:24] 2025-10-10 11:42:20,652 | INFO     | neventsw: 0
[2025-10-10 07:43:24] 2025-10-10 11:42:20,652 | INFO     | pid: 448932
[2025-10-10 07:43:24] 2025-10-10 11:42:20,711 | INFO     | pgrp: 448932
[2025-10-10 07:43:24] 2025-10-10 11:42:20,711 | INFO     | corecount: 8
[2025-10-10 07:43:24] 2025-10-10 11:42:20,711 | INFO     | event service: False
[2025-10-10 07:43:24] 2025-10-10 11:42:20,711 | INFO     | sizes: {0: 2348027, 2: 2348628, 3: 2348712, 4: 2348768, 5: 2348768, 7: 2348967, 9: 2349123, 22: 2349151, 34: 2349179, 46: 2349207, 58: 2316549, 59: 2349805, 70: 23
[2025-10-10 07:43:24] 2025-10-10 11:42:20,712 | INFO     | --------------------------------------------------
[2025-10-10 07:43:24] 2025-10-10 11:42:20,712 | INFO     | 
[2025-10-10 07:43:24] 2025-10-10 11:42:20,712 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 07:43:24] 2025-10-10 11:42:20,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:43:24] 2025-10-10 11:42:20,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:43:24] 2025-10-10 11:42:20,919 | INFO     | job 6837345003 has completed (purged errors)
[2025-10-10 07:43:24] 2025-10-10 11:42:20,919 | INFO     | overall cleanup function is called
[2025-10-10 07:43:24] 2025-10-10 11:42:21,935 | INFO     | --- collectZombieJob: --- 10, [448932]
[2025-10-10 07:43:24] 2025-10-10 11:42:21,935 | INFO     | zombie collector waiting for pid 448932
[2025-10-10 07:43:24] 2025-10-10 11:42:21,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:43:24] 2025-10-10 11:42:21,935 | INFO     | collected zombie processes
[2025-10-10 07:43:24] 2025-10-10 11:42:21,935 | INFO     | will attempt to kill all subprocesses of pid=448932
[2025-10-10 07:43:24] 2025-10-10 11:42:25,067 | INFO     | process IDs to be killed: [448932] (in reverse order)
[2025-10-10 07:43:24] 2025-10-10 11:42:26,167 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:43:24] 2025-10-10 11:42:26,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:43:24] 2025-10-10 11:42:26,525 | INFO     | did not find any defunct processes belonging to 448932
[2025-10-10 07:43:24] 2025-10-10 11:42:27,122 | INFO     | did not find any defunct processes belonging to 448932
[2025-10-10 07:43:24] 2025-10-10 11:42:27,122 | INFO     | ready for new job
[2025-10-10 07:43:24] 2025-10-10 11:42:27,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:43:24] 2025-10-10 11:42:27,171 | INFO     | ***************************************
[2025-10-10 07:43:24] 2025-10-10 11:42:27,171 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:43:24] 2025-10-10 11:42:27,171 | INFO     | ***************************************
[2025-10-10 07:43:24] 2025-10-10 11:42:27,172 | INFO     | 
[2025-10-10 07:43:24] 2025-10-10 11:42:27,181 | INFO     | architecture information:
[2025-10-10 07:43:24] 2025-10-10 11:42:27,182 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:43:24] 2025-10-10 11:42:27,382 | INFO     | cat /etc/os-release:
[2025-10-10 07:43:24] NAME="CentOS Linux"
[2025-10-10 07:43:24] VERSION="7 (Core)"
[2025-10-10 07:43:24] ID="centos"
[2025-10-10 07:43:24] ID_LIKE="rhel fedora"
[2025-10-10 07:43:24] VERSION_ID="7"
[2025-10-10 07:43:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:43:24] ANSI_COLOR="0;31"
[2025-10-10 07:43:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:43:24] HOME_URL="https://www.centos.org/"
[2025-10-10 07:43:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:43:24] 
[2025-10-10 07:43:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:43:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:43:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:43:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:43:24] 
[2025-10-10 07:43:24] 2025-10-10 11:42:27,382 | INFO     | ***************************************
[2025-10-10 07:43:24] 2025-10-10 11:42:27,886 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 07:43:24] 2025-10-10 11:42:28,039 | INFO     | sufficient remaining disk space (52573503488 B)
[2025-10-10 07:43:24] 2025-10-10 11:42:28,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:43:24] 2025-10-10 11:42:28,040 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:43:24] 2025-10-10 11:42:28,040 | INFO     | update_server=False
[2025-10-10 07:43:24] 2025-10-10 11:42:28,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:43:24] 2025-10-10 11:42:28,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:43:24] 2025-10-10 11:42:28,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:43:24] 2025-10-10 11:42:28,457 | INFO     | all payload control threads have been joined
[2025-10-10 07:43:24] 2025-10-10 11:42:28,458 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 07:43:24] 2025-10-10 11:42:28,458 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 07:43:24] 2025-10-10 11:42:28,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:43:24] 2025-10-10 11:42:28,458 | INFO     | will abort loop
[2025-10-10 07:43:24] 2025-10-10 11:42:28,740 | INFO     | all data control threads have been joined
[2025-10-10 07:43:24] 2025-10-10 11:42:29,073 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,180 | INFO     | all job control threads have been joined
[2025-10-10 07:43:24] 2025-10-10 11:42:29,463 | INFO     | [payload] control thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,470 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,478 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,483 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,493 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,686 | INFO     | [job] validate thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,708 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,755 | INFO     | [data] control thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,883 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:29,992 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:30,002 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:30,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:43:24] 2025-10-10 11:42:30,080 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:30,186 | INFO     | [job] control thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:31,016 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:42:32,124 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:43:24] 2025-10-10 11:43:01,517 | INFO     | PID=429184 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 07:43:24] 2025-10-10 11:43:01,517 | INFO     | .. there are 30 such processes running
[2025-10-10 07:43:24] 2025-10-10 11:43:01,537 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:43:24] 2025-10-10 11:43:01,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:43:24] 2025-10-10 11:43:01,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:43:24] 2025-10-10 11:43:12,738 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:43:24] 2025-10-10 11:43:13,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169346094912)>', '<ExcThread(monitor, started 140168338077440)>']
[2025-10-10 07:43:24] 2025-10-10 11:43:14,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:43:24] 2025-10-10 11:43:14,653 | INFO     | [monitor] control thread has ended
[2025-10-10 07:43:24] 2025-10-10 11:43:18,774 | INFO     | all workflow threads have been joined
[2025-10-10 07:43:24] 2025-10-10 11:43:18,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:43:24] 2025-10-10 11:43:18,774 | INFO     | traces error code: 0
[2025-10-10 07:43:24] 2025-10-10 11:43:18,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:43:24] 2025-10-10 11:43:22,402 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:43:24] 2025-10-10 11:43:22,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:43:24] 2025-10-10 11:43:22,534 [wrapper] pilotpid: 429184
[2025-10-10 07:43:24] 2025-10-10 11:43:22,594 [wrapper] Pilot exit status: 0
[2025-10-10 07:43:24] 2025-10-10 11:43:22,782 [wrapper] pandaids: 6837345003
[2025-10-10 07:43:24] 2025-10-10 11:43:23,739 [wrapper] cleanup supervisor_pilot 1888249 429185
[2025-10-10 07:43:24] 2025-10-10 11:43:23,743 [wrapper] Test setup, not cleaning
[2025-10-10 07:43:24] 2025-10-10 11:43:23,751 [wrapper] apfmon messages muted
[2025-10-10 07:43:24] 2025-10-10 11:43:23,770 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:43:24] 2025-10-10 11:43:23,840 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:43:24]  *** Error codes and diagnostics ***
[2025-10-10 07:43:24]     "exeErrorCode": 0,
[2025-10-10 07:43:24]     "exeErrorDiag": "",
[2025-10-10 07:43:24]     "pilotErrorCode": 0,
[2025-10-10 07:43:24]     "pilotErrorDiag": "",
[2025-10-10 07:43:24]  *** Listing of results directory ***
[2025-10-10 07:43:24] total 417380
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 09:56 pilot3.tar.gz
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 09:59 queuedata.json
[2025-10-10 07:43:24] -rwx------. 1 boincer umatlas     36292 Oct  9 09:59 runpilot2-wrapper.sh
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas       100 Oct  9 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:43:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 18:04 run_atlas
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas       105 Oct  9 18:04 job.xml
[2025-10-10 07:43:24] -rw-r--r--. 2 boincer umatlas 220084981 Oct  9 18:04 EVNT.46676267._000806.pool.root.1
[2025-10-10 07:43:24] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 18:04 start_atlas.sh
[2025-10-10 07:43:24] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 18:04 shared
[2025-10-10 07:43:24] -rw-r--r--. 2 boincer umatlas    569677 Oct  9 18:04 input.tar.gz
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas         0 Oct  9 18:04 boinc_lockfile
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas      2549 Oct  9 18:04 pandaJob.out
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas    975454 Oct  9 18:06 agis_schedconf.cvmfs.json
[2025-10-10 07:43:24] drwx------. 5 boincer umatlas      4096 Oct  9 18:06 pilot3
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas 191854844 Oct 10 07:34 HITS.46676269._019436.pool.root.1
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas       531 Oct 10 07:35 boinc_task_state.xml
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas      1041 Oct 10 07:40 memory_monitor_summary.json
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas   1560580 Oct 10 07:40 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas      6524 Oct 10 07:41 init_data.xml
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas    805460 Oct 10 07:41 log.46676269._019436.job.log.tgz.1
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas      7824 Oct 10 07:42 heartbeat.json
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas        95 Oct 10 07:43 pilot_heartbeat.json
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas        28 Oct 10 07:43 wrapper_checkpoint.txt
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 07:43 boinc_mmap_file
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas      5009 Oct 10 07:43 pilotlog.txt
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas   4975637 Oct 10 07:43 log.46676269._019436.job.log.1
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas       357 Oct 10 07:43 output.list
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas       620 Oct 10 07:43 runtime_log
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas   5795840 Oct 10 07:43 result.tar.gz
[2025-10-10 07:43:24] -rw-------. 1 boincer umatlas       659 Oct 10 07:43 MNnNDmwL6Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCFaNDmqYOqon.diag
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas      8704 Oct 10 07:43 runtime_log.err
[2025-10-10 07:43:24] -rw-r--r--. 1 boincer umatlas     21146 Oct 10 07:43 stderr.txt
[2025-10-10 07:43:25] HITS file was successfully produced:
[2025-10-10 07:43:25] -rw-------. 1 boincer umatlas 191854844 Oct 10 07:34 shared/HITS.pool.root.1
[2025-10-10 07:43:25]  *** Contents of shared directory: ***
[2025-10-10 07:43:25] total 408528
[2025-10-10 07:43:25] -rw-r--r--. 2 boincer umatlas 220084981 Oct  9 18:04 ATLAS.root_0
[2025-10-10 07:43:25] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 18:04 start_atlas.sh
[2025-10-10 07:43:25] -rw-r--r--. 2 boincer umatlas    569677 Oct  9 18:04 input.tar.gz
[2025-10-10 07:43:25] -rw-------. 1 boincer umatlas 191854844 Oct 10 07:34 HITS.pool.root.1
[2025-10-10 07:43:25] -rw-------. 1 boincer umatlas   5795840 Oct 10 07:43 result.tar.gz
07:43:26 (417255): run_atlas exited; CPU time 81533.705731
07:43:26 (417255): called boinc_finish(0)

</stderr_txt>
]]>

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