Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:34:42 (2980253): wrapper (7.7.26015): starting
10:34:42 (2980253): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 10:34:42] Arguments: --nthreads 8
[2025-10-09 10:34:42] Threads: 8
[2025-10-09 10:34:42] Checking for CVMFS
[2025-10-09 10:34:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 10:34:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 10:34:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 10:34:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 10:34:43] 2.11.3.0 2268 27113 188916 151518 0 54 27474015 45568000 20385 130560 0 153673285 99.842 71955977 25875 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-10-09 10:34:43] CVMFS is ok
[2025-10-09 10:34:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 10:34:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 10:34:43] Further information can be found at the LHC@home message board.
[2025-10-09 10:34:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 10:34:43] Checking for apptainer binary...
[2025-10-09 10:34:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 10:34:43] Running /usr/bin/apptainer --version
[2025-10-09 10:34:43] apptainer version 1.4.1-1.el9
[2025-10-09 10:34:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 10:34:44] wns0008.triumf.lcg
[2025-10-09 10:34:44] apptainer works
[2025-10-09 10:34:44] Set ATHENA_PROC_NUMBER=8
[2025-10-09 10:34:44] Set ATHENA_CORE_NUMBER=8
[2025-10-09 10:34:44] Starting ATLAS job with PandaID=6837350281
[2025-10-09 10:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 10:40:14]  *** The last 200 lines of the pilot log: ***
[2025-10-09 10:40:14] 2025-10-09 17:39:20,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 10:40:14] 2025-10-09 17:39:20,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | WARNING  | wrong length of table data, x=[1760031380.0], y=[1806.0] (must be same and length>=4)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | ..............................
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . Timing measurements:
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . get job = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . initial setup = 5 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . payload setup = 20 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . stage-in = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . payload execution = 62 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | . stage-out = 1 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | . log creation = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | ..............................
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837350281/pilotlog.txt
[2025-10-09 10:40:14] 2025-10-09 17:39:20,688 | INFO     | time since job start (251s) is within the limit (172800.0s)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,692 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 10:40:14] - Log from pilotlog.txt -
[2025-10-09 10:40:14] 2025-10-09 17:39:20,670 | INFO     | extracted standard info from prmon json
[2025-10-09 10:40:14] 2025-10-09 17:39:20,670 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 10:40:14] 2025-10-09 17:39:20,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 10:40:14] 2025-10-09 17:39:20,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 10:40:14] 2025-10-09 17:39:20,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | WARNING  | wrong length of table data, x=[1760031380.0], y=[1806.0] (must be same and length>=4)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | ..............................
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . Timing measurements:
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . get job = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . initial setup = 5 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . payload setup = 20 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . stage-in = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . payload execution = 62 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | . stage-out = 1 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | . log creation = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | ..............................
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837350281/pilotlog.txt
[2025-10-09 10:40:14] 2025-10-09 17:39:20,688 | INFO     | time since job start (251s) is within the limit (172800.0s)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,693 | WARNING  | 
[2025-10-09 10:40:14] [begin log extracts]
[2025-10-09 10:40:14] - Log from pilotlog.txt -
[2025-10-09 10:40:14] 2025-10-09 17:39:20,670 | INFO     | extracted standard info from prmon json
[2025-10-09 10:40:14] 2025-10-09 17:39:20,670 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 10:40:14] 2025-10-09 17:39:20,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 10:40:14] 2025-10-09 17:39:20,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 10:40:14] 2025-10-09 17:39:20,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | WARNING  | wrong length of table data, x=[1760031380.0], y=[1806.0] (must be same and length>=4)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | ..............................
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . Timing measurements:
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . get job = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . initial setup = 5 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . payload setup = 20 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . stage-in = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,672 | INFO     | . payload execution = 62 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | . stage-out = 1 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | . log creation = 0 s
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | ..............................
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 10:40:14] 2025-10-09 17:39:20,673 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837350281/pilotlog.txt
[2025-10-09 10:40:14] 2025-10-09 17:39:20,688 | INFO     | time since job start (251s) is within the limit (172800.0s)
[2025-10-09 10:40:14] [end log extracts]
[2025-10-09 10:40:14] 2025-10-09 17:39:20,693 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 10:40:14] 2025-10-09 17:39:20,694 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 10:40:14] 2025-10-09 17:39:21,111 | INFO     | 
[2025-10-09 10:40:14] 2025-10-09 17:39:21,111 | INFO     | job summary report
[2025-10-09 10:40:14] 2025-10-09 17:39:21,111 | INFO     | --------------------------------------------------
[2025-10-09 10:40:14] 2025-10-09 17:39:21,111 | INFO     | PanDA job id: 6837350281
[2025-10-09 10:40:14] 2025-10-09 17:39:21,111 | INFO     | task id: 46676269
[2025-10-09 10:40:14] 2025-10-09 17:39:21,111 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 10:37:00,310 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 10:40:14] 2025-10-09 17:39:21,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 10:40:14] 2025-10-09 17:39:21,112 | INFO     | pilot state: failed 
[2025-10-09 10:40:14] 2025-10-09 17:39:21,116 | INFO     | transexitcode: 65
[2025-10-09 10:40:14] 2025-10-09 17:39:21,116 | INFO     | exeerrorcode: 65
[2025-10-09 10:40:14] 2025-10-09 17:39:21,116 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 10:40:14] 2025-10-09 17:39:21,116 | INFO     | exitcode: 65
[2025-10-09 10:40:14] 2025-10-09 17:39:21,116 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 10:40:14] 2025-10-09 17:39:21,116 | INFO     | cpuconsumptiontime: 20 s
[2025-10-09 10:40:14] 2025-10-09 17:39:21,116 | INFO     | nevents: 0
[2025-10-09 10:40:14] 2025-10-09 17:39:21,116 | INFO     | neventsw: 0
[2025-10-09 10:40:14] 2025-10-09 17:39:21,117 | INFO     | pid: 2990666
[2025-10-09 10:40:14] 2025-10-09 17:39:21,117 | INFO     | pgrp: 2990666
[2025-10-09 10:40:14] 2025-10-09 17:39:21,117 | INFO     | corecount: 8
[2025-10-09 10:40:14] 2025-10-09 17:39:21,117 | INFO     | event service: False
[2025-10-09 10:40:14] 2025-10-09 17:39:21,117 | INFO     | sizes: {0: 2348027, 1: 2348880, 12: 2348880, 19: 2349170, 23: 2349198, 87: 2372523, 90: 2376815, 93: 2376843, 217: 2377009}
[2025-10-09 10:40:14] 2025-10-09 17:39:21,117 | INFO     | --------------------------------------------------
[2025-10-09 10:40:14] 2025-10-09 17:39:21,117 | INFO     | 
[2025-10-09 10:40:14] 2025-10-09 17:39:21,117 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 10:40:14] 2025-10-09 17:39:21,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | job 6837350281 has completed (purged errors)
[2025-10-09 10:40:14] 2025-10-09 17:39:21,306 | INFO     | overall cleanup function is called
[2025-10-09 10:40:14] 2025-10-09 17:39:22,313 | INFO     | --- collectZombieJob: --- 10, [2990666]
[2025-10-09 10:40:14] 2025-10-09 17:39:22,313 | INFO     | zombie collector waiting for pid 2990666
[2025-10-09 10:40:14] 2025-10-09 17:39:22,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 10:40:14] 2025-10-09 17:39:22,313 | INFO     | collected zombie processes
[2025-10-09 10:40:14] 2025-10-09 17:39:22,313 | INFO     | will attempt to kill all subprocesses of pid=2990666
[2025-10-09 10:40:14] 2025-10-09 17:39:22,545 | INFO     | process IDs to be killed: [2990666] (in reverse order)
[2025-10-09 10:40:14] 2025-10-09 17:39:22,614 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 10:40:14] 2025-10-09 17:39:22,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 10:40:14] 2025-10-09 17:39:22,623 | INFO     | did not find any defunct processes belonging to 2990666
[2025-10-09 10:40:14] 2025-10-09 17:39:22,631 | INFO     | did not find any defunct processes belonging to 2990666
[2025-10-09 10:40:14] 2025-10-09 17:39:22,631 | INFO     | ready for new job
[2025-10-09 10:40:14] 2025-10-09 17:39:22,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 10:40:14] 2025-10-09 17:39:22,633 | INFO     | ***************************************
[2025-10-09 10:40:14] 2025-10-09 17:39:22,633 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 10:40:14] 2025-10-09 17:39:22,633 | INFO     | ***************************************
[2025-10-09 10:40:14] 2025-10-09 17:39:22,633 | INFO     | 
[2025-10-09 10:40:14] 2025-10-09 17:39:22,635 | INFO     | architecture information:
[2025-10-09 10:40:14] 2025-10-09 17:39:22,635 | INFO     | executing command: cat /etc/os-release
[2025-10-09 10:40:14] 2025-10-09 17:39:22,663 | INFO     | cat /etc/os-release:
[2025-10-09 10:40:14] NAME="CentOS Linux"
[2025-10-09 10:40:14] VERSION="7 (Core)"
[2025-10-09 10:40:14] ID="centos"
[2025-10-09 10:40:14] ID_LIKE="rhel fedora"
[2025-10-09 10:40:14] VERSION_ID="7"
[2025-10-09 10:40:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 10:40:14] ANSI_COLOR="0;31"
[2025-10-09 10:40:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 10:40:14] HOME_URL="https://www.centos.org/"
[2025-10-09 10:40:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 10:40:14] 
[2025-10-09 10:40:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 10:40:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 10:40:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 10:40:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 10:40:14] 
[2025-10-09 10:40:14] 2025-10-09 17:39:22,664 | INFO     | ***************************************
[2025-10-09 10:40:14] 2025-10-09 17:39:23,167 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 10:40:14] 2025-10-09 17:39:23,209 | INFO     | sufficient remaining disk space (1172495663104 B)
[2025-10-09 10:40:14] 2025-10-09 17:39:23,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 10:40:14] 2025-10-09 17:39:23,210 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 10:40:14] 2025-10-09 17:39:23,210 | INFO     | update_server=False
[2025-10-09 10:40:14] 2025-10-09 17:39:23,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 10:40:14] 2025-10-09 17:39:23,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 10:40:14] 2025-10-09 17:39:23,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:40:14] 2025-10-09 17:39:23,213 | INFO     | aborting loop
[2025-10-09 10:40:14] 2025-10-09 17:39:23,763 | INFO     | all payload control threads have been joined
[2025-10-09 10:40:14] 2025-10-09 17:39:23,851 | INFO     | all data control threads have been joined
[2025-10-09 10:40:14] 2025-10-09 17:39:24,216 | INFO     | [job] retrieve thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,219 | INFO     | [job] job monitor thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,333 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,553 | INFO     | [payload] failed_post thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,563 | INFO     | [data] copytool_in thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,576 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,614 | INFO     | [job] validate thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,769 | INFO     | [payload] control thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,841 | INFO     | all job control threads have been joined
[2025-10-09 10:40:14] 2025-10-09 17:39:24,857 | INFO     | [data] control thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:24,904 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:25,159 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:25,224 | INFO     | [data] copytool_out thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:25,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 10:40:14] 2025-10-09 17:39:25,264 | INFO     | [payload] validate_post thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:25,847 | INFO     | [job] control thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:25,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:40:14] 2025-10-09 17:39:26,931 | INFO     | [job] queue monitor thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:29,242 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 10:40:14] 2025-10-09 17:39:54,053 | INFO     | PID=2983938 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 10:40:14] 2025-10-09 17:39:54,053 | INFO     | .. there are 33 such processes running
[2025-10-09 10:40:14] 2025-10-09 17:39:54,054 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 10:40:14] 2025-10-09 17:39:54,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 10:40:14] 2025-10-09 17:39:54,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 10:40:14] 2025-10-09 17:40:08,107 | INFO     | [monitor] cgroup control has ended
[2025-10-09 10:40:14] 2025-10-09 17:40:09,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589671274304)>', '<ExcThread(monitor, started 140588833826560)>']
[2025-10-09 10:40:14] 2025-10-09 17:40:09,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 10:40:14] 2025-10-09 17:40:09,153 | INFO     | [monitor] control thread has ended
[2025-10-09 10:40:14] 2025-10-09 17:40:14,154 | INFO     | all workflow threads have been joined
[2025-10-09 10:40:14] 2025-10-09 17:40:14,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 10:40:14] 2025-10-09 17:40:14,154 | INFO     | traces error code: 0
[2025-10-09 10:40:14] 2025-10-09 17:40:14,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 10:40:14] 2025-10-09 17:40:14,304 [wrapper] ==== pilot stdout END ====
[2025-10-09 10:40:14] 2025-10-09 17:40:14,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 10:40:14] 2025-10-09 17:40:14,308 [wrapper] pilotpid: 2983938
[2025-10-09 10:40:14] 2025-10-09 17:40:14,310 [wrapper] Pilot exit status: 0
[2025-10-09 10:40:14] 2025-10-09 17:40:14,388 [wrapper] pandaids: 6837350281
[2025-10-09 10:40:14] 2025-10-09 17:40:14,441 [wrapper] cleanup supervisor_pilot 2983944 2983939
[2025-10-09 10:40:14] 2025-10-09 17:40:14,443 [wrapper] Test setup, not cleaning
[2025-10-09 10:40:14] 2025-10-09 17:40:14,446 [wrapper] apfmon messages muted
[2025-10-09 10:40:14] 2025-10-09 17:40:14,450 [wrapper] ==== wrapper stdout END ====
[2025-10-09 10:40:14] 2025-10-09 17:40:14,453 [wrapper] ==== wrapper stderr END ====
[2025-10-09 10:40:14]  *** Error codes and diagnostics ***
[2025-10-09 10:40:14]     "exeErrorCode": 65,
[2025-10-09 10:40:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 10:40:14]     "pilotErrorCode": 1305,
[2025-10-09 10:40:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 10:40:14]  *** Listing of results directory ***
[2025-10-09 10:40:14] total 219008
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc    557409 Oct  9 08:29 pilot3.tar.gz
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc      5112 Oct  9 08:43 queuedata.json
[2025-10-09 10:40:14] -rwx------. 1 boinc boinc     36292 Oct  9 08:44 runpilot2-wrapper.sh
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc       100 Oct  9 10:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 10:40:14] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 10:34 run_atlas
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc       105 Oct  9 10:34 job.xml
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc      6443 Oct  9 10:34 init_data.xml
[2025-10-09 10:40:14] -rw-r--r--. 2 boinc boinc 220132403 Oct  9 10:34 EVNT.46676267._000411.pool.root.1
[2025-10-09 10:40:14] -rw-r--r--. 2 boinc boinc     15120 Oct  9 10:34 start_atlas.sh
[2025-10-09 10:40:14] drwxrwx--x. 2 boinc boinc      4096 Oct  9 10:34 shared
[2025-10-09 10:40:14] -rw-r--r--. 2 boinc boinc    569682 Oct  9 10:34 input.tar.gz
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc         0 Oct  9 10:34 boinc_lockfile
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc      2549 Oct  9 10:34 pandaJob.out
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc    975446 Oct  9 10:35 agis_schedconf.cvmfs.json
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc   1560401 Oct  9 10:35 agis_ddmendpoints.agis.ALL.json
[2025-10-09 10:40:14] drwx------. 5 boinc boinc      4096 Oct  9 10:35 pilot3
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc       525 Oct  9 10:36 boinc_task_state.xml
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc       968 Oct  9 10:37 memory_monitor_summary.json
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc     22162 Oct  9 10:37 log.46676269._021648.job.log.tgz.1
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc        95 Oct  9 10:39 pilot_heartbeat.json
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc      8376 Oct  9 10:39 heartbeat.json
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc      8192 Oct  9 10:40 boinc_mmap_file
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc        23 Oct  9 10:40 wrapper_checkpoint.txt
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc      4823 Oct  9 10:40 pilotlog.txt
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc     91820 Oct  9 10:40 log.46676269._021648.job.log.1
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc       188 Oct  9 10:40 output.list
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc       620 Oct  9 10:40 runtime_log
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc    133120 Oct  9 10:40 result.tar.gz
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc      8526 Oct  9 10:40 runtime_log.err
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc       647 Oct  9 10:40 BKDODmPz7Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqcaNDmyMOqpn.diag
[2025-10-09 10:40:14] -rw-r--r--. 1 boinc boinc     21735 Oct  9 10:40 stderr.txt
[2025-10-09 10:40:14] No HITS result produced
[2025-10-09 10:40:14]  *** Contents of shared directory: ***
[2025-10-09 10:40:14] total 215688
[2025-10-09 10:40:14] -rw-r--r--. 2 boinc boinc 220132403 Oct  9 10:34 ATLAS.root_0
[2025-10-09 10:40:14] -rw-r--r--. 2 boinc boinc     15120 Oct  9 10:34 start_atlas.sh
[2025-10-09 10:40:14] -rw-r--r--. 2 boinc boinc    569682 Oct  9 10:34 input.tar.gz
[2025-10-09 10:40:14] -rw-------. 1 boinc boinc    133120 Oct  9 10:40 result.tar.gz
10:40:16 (2980253): run_atlas exited; CPU time 29.608727
10:40:16 (2980253): called boinc_finish(0)

</stderr_txt>
]]>

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