Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
23:59:04 (1369011): wrapper (7.7.26015): starting
23:59:04 (1369011): wrapper: running run_atlas (--nthreads 2)
[2025-10-09 23:59:04] Arguments: --nthreads 2
[2025-10-09 23:59:04] Threads: 2
[2025-10-09 23:59:04] Checking for CVMFS
[2025-10-09 23:59:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 23:59:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 23:59:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 23:59:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 23:59:05] 2.11.0.0 1278923 671 47748 151524 2 56 5482022 6144000 0 130560 0 1471817 99.997 20030 509 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-09 23:59:05] CVMFS is ok
[2025-10-09 23:59:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 23:59:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-09 23:59:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-09 23:59:05] Further information can be found at the LHC@home message board.
[2025-10-09 23:59:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 23:59:05] Checking for apptainer binary...
[2025-10-09 23:59:05] apptainer is not installed, using version from CVMFS
[2025-10-09 23:59:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 23:59:05] mordor
[2025-10-09 23:59:05] apptainer works
[2025-10-09 23:59:05] Set ATHENA_PROC_NUMBER=2
[2025-10-09 23:59:05] Set ATHENA_CORE_NUMBER=2
[2025-10-09 23:59:05] Starting ATLAS job with PandaID=6837343873
[2025-10-09 23:59:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 05:43:53]  *** The last 200 lines of the pilot log: ***
[2025-10-10 05:43:53] 2025-10-10 03:43:07,970 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 05:43:53] 2025-10-10 03:43:07,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 05:43:53] 2025-10-10 03:43:07,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 05:43:53] 2025-10-10 03:43:07,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 05:43:53] 2025-10-10 03:43:07,975 | INFO     | fitting pss+swap vs Time
[2025-10-10 05:43:53] 2025-10-10 03:43:07,975 | INFO     | sum of square deviations: 11973599384.5
[2025-10-10 05:43:53] 2025-10-10 03:43:07,977 | INFO     | sum of deviations: 16650872685.999992
[2025-10-10 05:43:53] 2025-10-10 03:43:07,977 | INFO     | mean x: 1760057452.5
[2025-10-10 05:43:53] 2025-10-10 03:43:07,977 | INFO     | mean y: 2255568.928994083
[2025-10-10 05:43:53] 2025-10-10 03:43:07,977 | INFO     | -- intersect: -2445336973.6744156
[2025-10-10 05:43:53] 2025-10-10 03:43:07,978 | INFO     | intersect: -2445336973.6744156
[2025-10-10 05:43:53] 2025-10-10 03:43:07,978 | INFO     | chi2: 1.7771700352941444
[2025-10-10 05:43:53] 2025-10-10 03:43:07,978 | INFO     | sum of square deviations: 11450045382.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,980 | INFO     | sum of deviations: 34657745848.00001
[2025-10-10 05:43:53] 2025-10-10 03:43:07,980 | INFO     | mean x: 1760057300.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,980 | INFO     | mean y: 2260748.4114114116
[2025-10-10 05:43:53] 2025-10-10 03:43:07,980 | INFO     | -- intersect: -5325195741.604893
[2025-10-10 05:43:53] 2025-10-10 03:43:07,980 | INFO     | intersect: -5325195741.604893
[2025-10-10 05:43:53] 2025-10-10 03:43:07,981 | INFO     | chi2: 1.120946591593968
[2025-10-10 05:43:53] 2025-10-10 03:43:07,981 | INFO     | current chi2=1.120946591593968 (change=36.92519177499879 %)
[2025-10-10 05:43:53] 2025-10-10 03:43:07,981 | INFO     | sum of square deviations: 10941980042.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,983 | INFO     | sum of deviations: 33605808472.999996
[2025-10-10 05:43:53] 2025-10-10 03:43:07,983 | INFO     | mean x: 1760057147.5
[2025-10-10 05:43:53] 2025-10-10 03:43:07,983 | INFO     | mean y: 2260432.6280487804
[2025-10-10 05:43:53] 2025-10-10 03:43:07,983 | INFO     | -- intersect: -5403355660.015497
[2025-10-10 05:43:53] 2025-10-10 03:43:07,984 | INFO     | intersect: -5403355660.015497
[2025-10-10 05:43:53] 2025-10-10 03:43:07,984 | INFO     | chi2: 1.1211417049480539
[2025-10-10 05:43:53] 2025-10-10 03:43:07,984 | INFO     | current chi2=1.1211417049480539 (change=-0.017406124033830433 %)
[2025-10-10 05:43:53] 2025-10-10 03:43:07,984 | INFO     | right removable region: 327
[2025-10-10 05:43:53] 2025-10-10 03:43:07,984 | INFO     | sum of square deviations: 11450045382.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,986 | INFO     | sum of deviations: -3748301160.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,986 | INFO     | mean x: 1760057605.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,987 | INFO     | mean y: 2261405.900900901
[2025-10-10 05:43:53] 2025-10-10 03:43:07,987 | INFO     | -- intersect: 578436062.1917368
[2025-10-10 05:43:53] 2025-10-10 03:43:07,987 | INFO     | intersect: 578436062.1917368
[2025-10-10 05:43:53] 2025-10-10 03:43:07,987 | INFO     | chi2: 0.6935122266861986
[2025-10-10 05:43:53] 2025-10-10 03:43:07,987 | INFO     | current chi2=0.6935122266861986 (change=60.97659689769564 %)
[2025-10-10 05:43:53] 2025-10-10 03:43:07,987 | INFO     | sum of square deviations: 10941980042.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,989 | INFO     | sum of deviations: -2114258535.999998
[2025-10-10 05:43:53] 2025-10-10 03:43:07,990 | INFO     | mean x: 1760057757.5
[2025-10-10 05:43:53] 2025-10-10 03:43:07,990 | INFO     | mean y: 2260927.6280487804
[2025-10-10 05:43:53] 2025-10-10 03:43:07,990 | INFO     | -- intersect: 342347193.8580882
[2025-10-10 05:43:53] 2025-10-10 03:43:07,990 | INFO     | intersect: 342347193.8580882
[2025-10-10 05:43:53] 2025-10-10 03:43:07,990 | INFO     | chi2: 0.6700953082136629
[2025-10-10 05:43:53] 2025-10-10 03:43:07,990 | INFO     | current chi2=0.6700953082136629 (change=3.376568944491213 %)
[2025-10-10 05:43:53] 2025-10-10 03:43:07,990 | INFO     | left removable region: 20
[2025-10-10 05:43:53] 2025-10-10 03:43:07,991 | INFO     | sum of square deviations: 8971993338.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,992 | INFO     | sum of deviations: 11477150549.000002
[2025-10-10 05:43:53] 2025-10-10 03:43:07,992 | INFO     | mean x: 1760057727.0
[2025-10-10 05:43:53] 2025-10-10 03:43:07,992 | INFO     | mean y: 2267165.605863192
[2025-10-10 05:43:53] 2025-10-10 03:43:07,993 | INFO     | -- intersect: -2249233336.7577224
[2025-10-10 05:43:53] 2025-10-10 03:43:07,993 | INFO     | intersect: -2249233336.7577224
[2025-10-10 05:43:53] 2025-10-10 03:43:07,993 | INFO     | chi2: 0.0034069700467115496
[2025-10-10 05:43:53] 2025-10-10 03:43:07,993 | INFO     | -- intersect: -2249233336.7577224
[2025-10-10 05:43:53] 2025-10-10 03:43:07,993 | INFO     | current memory leak: 1.28 B/s (using 307 data points, chi2=0.00)
[2025-10-10 05:43:53] 2025-10-10 03:43:07,993 | INFO     | could have reported an average CPU frequency of 2970 MHz (15 samples)
[2025-10-10 05:43:53] 2025-10-10 03:43:07,993 | INFO     | ..............................
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | . Timing measurements:
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | . get job = 0 s
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | . initial setup = 1 s
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | . payload setup = 3 s
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | . stage-in = 0 s
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | . payload execution = 20579 s
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | . stage-out = 2 s
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | . log creation = 0 s
[2025-10-10 05:43:53] 2025-10-10 03:43:07,994 | INFO     | ..............................
[2025-10-10 05:43:53] 2025-10-10 03:43:08,454 | INFO     | 
[2025-10-10 05:43:53] 2025-10-10 03:43:08,455 | INFO     | job summary report
[2025-10-10 05:43:53] 2025-10-10 03:43:08,455 | INFO     | --------------------------------------------------
[2025-10-10 05:43:53] 2025-10-10 03:43:08,455 | INFO     | PanDA job id: 6837343873
[2025-10-10 05:43:53] 2025-10-10 03:43:08,455 | INFO     | task id: 46676269
[2025-10-10 05:43:53] 2025-10-10 03:43:08,455 | INFO     | errors: (none)
[2025-10-10 05:43:53] 2025-10-10 03:43:08,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 05:43:53] 2025-10-10 03:43:08,456 | INFO     | pilot state: finished 
[2025-10-10 05:43:53] 2025-10-10 03:43:08,456 | INFO     | transexitcode: 0
[2025-10-10 05:43:53] 2025-10-10 03:43:08,456 | INFO     | exeerrorcode: 0
[2025-10-10 05:43:53] 2025-10-10 03:43:08,456 | INFO     | exeerrordiag: 
[2025-10-10 05:43:53] 2025-10-10 03:43:08,456 | INFO     | exitcode: 0
[2025-10-10 05:43:53] 2025-10-10 03:43:08,456 | INFO     | exitmsg: OK
[2025-10-10 05:43:53] 2025-10-10 03:43:08,456 | INFO     | cpuconsumptiontime: 40196 s
[2025-10-10 05:43:53] 2025-10-10 03:43:08,457 | INFO     | nevents: 400
[2025-10-10 05:43:53] 2025-10-10 03:43:08,457 | INFO     | neventsw: 0
[2025-10-10 05:43:53] 2025-10-10 03:43:08,457 | INFO     | pid: 1378984
[2025-10-10 05:43:53] 2025-10-10 03:43:08,457 | INFO     | pgrp: 1378984
[2025-10-10 05:43:53] 2025-10-10 03:43:08,457 | INFO     | corecount: 2
[2025-10-10 05:43:53] 2025-10-10 03:43:08,457 | INFO     | event service: False
[2025-10-10 05:43:53] 2025-10-10 03:43:08,457 | INFO     | sizes: {0: 2348027, 1: 2348890, 3: 2349152, 12: 2349180, 20586: 2382803, 20589: 2391815, 20591: 2391999, 20622: 2392193}
[2025-10-10 05:43:53] 2025-10-10 03:43:08,458 | INFO     | --------------------------------------------------
[2025-10-10 05:43:53] 2025-10-10 03:43:08,458 | INFO     | 
[2025-10-10 05:43:53] 2025-10-10 03:43:08,458 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 05:43:53] 2025-10-10 03:43:08,476 | INFO     | job 6837343873 has completed (purged errors)
[2025-10-10 05:43:53] 2025-10-10 03:43:08,476 | INFO     | overall cleanup function is called
[2025-10-10 05:43:53] 2025-10-10 03:43:09,481 | INFO     | --- collectZombieJob: --- 10, [1378984]
[2025-10-10 05:43:53] 2025-10-10 03:43:09,482 | INFO     | zombie collector waiting for pid 1378984
[2025-10-10 05:43:53] 2025-10-10 03:43:09,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 05:43:53] 2025-10-10 03:43:09,482 | INFO     | collected zombie processes
[2025-10-10 05:43:53] 2025-10-10 03:43:09,482 | INFO     | will attempt to kill all subprocesses of pid=1378984
[2025-10-10 05:43:53] 2025-10-10 03:43:09,544 | INFO     | process IDs to be killed: [1378984] (in reverse order)
[2025-10-10 05:43:53] 2025-10-10 03:43:09,570 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 05:43:53] 2025-10-10 03:43:09,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 05:43:53] 2025-10-10 03:43:09,572 | INFO     | did not find any defunct processes belonging to 1378984
[2025-10-10 05:43:53] 2025-10-10 03:43:09,573 | INFO     | did not find any defunct processes belonging to 1378984
[2025-10-10 05:43:53] 2025-10-10 03:43:09,573 | INFO     | ready for new job
[2025-10-10 05:43:53] 2025-10-10 03:43:09,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 05:43:53] 2025-10-10 03:43:09,575 | INFO     | ***************************************
[2025-10-10 05:43:53] 2025-10-10 03:43:09,575 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 05:43:53] 2025-10-10 03:43:09,575 | INFO     | ***************************************
[2025-10-10 05:43:53] 2025-10-10 03:43:09,575 | INFO     | 
[2025-10-10 05:43:53] 2025-10-10 03:43:09,595 | INFO     | architecture information:
[2025-10-10 05:43:53] 2025-10-10 03:43:09,595 | INFO     | executing command: cat /etc/os-release
[2025-10-10 05:43:53] 2025-10-10 03:43:09,606 | INFO     | cat /etc/os-release:
[2025-10-10 05:43:53] NAME="CentOS Linux"
[2025-10-10 05:43:53] VERSION="7 (Core)"
[2025-10-10 05:43:53] ID="centos"
[2025-10-10 05:43:53] ID_LIKE="rhel fedora"
[2025-10-10 05:43:53] VERSION_ID="7"
[2025-10-10 05:43:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 05:43:53] ANSI_COLOR="0;31"
[2025-10-10 05:43:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 05:43:53] HOME_URL="https://www.centos.org/"
[2025-10-10 05:43:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 05:43:53] 
[2025-10-10 05:43:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 05:43:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 05:43:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 05:43:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 05:43:53] 
[2025-10-10 05:43:53] 2025-10-10 03:43:09,607 | INFO     | ***************************************
[2025-10-10 05:43:53] 2025-10-10 03:43:10,110 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-10 05:43:53] 2025-10-10 03:43:10,122 | INFO     | sufficient remaining disk space (417809301504 B)
[2025-10-10 05:43:53] 2025-10-10 03:43:10,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 05:43:53] 2025-10-10 03:43:10,122 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 05:43:53] 2025-10-10 03:43:10,122 | INFO     | update_server=False
[2025-10-10 05:43:53] 2025-10-10 03:43:10,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 05:43:53] 2025-10-10 03:43:10,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:43:53] 2025-10-10 03:43:10,123 | INFO     | aborting loop
[2025-10-10 05:43:53] 2025-10-10 03:43:10,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 05:43:53] 2025-10-10 03:43:10,899 | INFO     | all data control threads have been joined
[2025-10-10 05:43:53] 2025-10-10 03:43:10,987 | INFO     | all job control threads have been joined
[2025-10-10 05:43:53] 2025-10-10 03:43:10,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 05:43:53] 2025-10-10 03:43:11,127 | INFO     | [job] job monitor thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:11,128 | INFO     | [job] retrieve thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:11,378 | INFO     | [payload] failed_post thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:11,478 | INFO     | all payload control threads have been joined
[2025-10-10 05:43:53] 2025-10-10 03:43:11,905 | INFO     | [data] control thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:11,989 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:11,991 | INFO     | [job] control thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:12,037 | INFO     | [payload] validate_post thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:12,167 | INFO     | [job] validate thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:12,331 | INFO     | [data] copytool_in thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:12,457 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:12,483 | INFO     | [payload] control thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:12,559 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:12,621 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:12,994 | INFO     | [data] copytool_out thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:13,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:43:53] 2025-10-10 03:43:14,070 | INFO     | [job] queue monitor thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:14,172 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 05:43:53] 2025-10-10 03:43:39,777 | INFO     | PID=1372648 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 05:43:53] 2025-10-10 03:43:39,777 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 05:43:53] 2025-10-10 03:43:39,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 05:43:53] 2025-10-10 03:43:39,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 05:43:53] 2025-10-10 03:43:46,831 | INFO     | [monitor] cgroup control has ended
[2025-10-10 05:43:53] 2025-10-10 03:43:48,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959882516288)>', '<ExcThread(monitor, started 139959218464512)>']
[2025-10-10 05:43:53] 2025-10-10 03:43:48,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 05:43:53] 2025-10-10 03:43:48,819 | INFO     | [monitor] control thread has ended
[2025-10-10 05:43:53] 2025-10-10 03:43:53,768 | INFO     | all workflow threads have been joined
[2025-10-10 05:43:53] 2025-10-10 03:43:53,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 05:43:53] 2025-10-10 03:43:53,769 | INFO     | traces error code: 0
[2025-10-10 05:43:53] 2025-10-10 03:43:53,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 05:43:53] 2025-10-10 03:43:53,853 [wrapper] ==== pilot stdout END ====
[2025-10-10 05:43:53] 2025-10-10 03:43:53,854 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 05:43:53] 2025-10-10 03:43:53,856 [wrapper] pilotpid: 1372648
[2025-10-10 05:43:53] 2025-10-10 03:43:53,857 [wrapper] Pilot exit status: 0
[2025-10-10 05:43:53] 2025-10-10 03:43:53,863 [wrapper] pandaids: 6837343873
[2025-10-10 05:43:53] 2025-10-10 03:43:53,875 [wrapper] cleanup supervisor_pilot 1409620 1372649
[2025-10-10 05:43:53] 2025-10-10 03:43:53,877 [wrapper] Test setup, not cleaning
[2025-10-10 05:43:53] 2025-10-10 03:43:53,879 [wrapper] apfmon messages muted
[2025-10-10 05:43:53] 2025-10-10 03:43:53,880 [wrapper] ==== wrapper stdout END ====
[2025-10-10 05:43:53] 2025-10-10 03:43:53,882 [wrapper] ==== wrapper stderr END ====
[2025-10-10 05:43:53]  *** Error codes and diagnostics ***
[2025-10-10 05:43:53]     "exeErrorCode": 0,
[2025-10-10 05:43:53]     "exeErrorDiag": "",
[2025-10-10 05:43:53]     "pilotErrorCode": 0,
[2025-10-10 05:43:53]     "pilotErrorDiag": "",
[2025-10-10 05:43:53]  *** Listing of results directory ***
[2025-10-10 05:43:53] total 414884
[2025-10-10 05:43:53] -rw-r--r-- 1 root root    557409 Oct  9 15:21 pilot3.tar.gz
[2025-10-10 05:43:53] -rw-r--r-- 1 root root      5112 Oct  9 15:23 queuedata.json
[2025-10-10 05:43:53] -rwx------ 1 4871 1028     36292 Oct  9 15:26 runpilot2-wrapper.sh
[2025-10-10 05:43:53] -rw-r--r-- 1 root root       100 Oct  9 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 05:43:53] -rwxr-xr-x 1 root root      7986 Oct  9 23:59 run_atlas
[2025-10-10 05:43:53] -rw-r--r-- 1 root root       105 Oct  9 23:59 job.xml
[2025-10-10 05:43:53] -rw-r--r-- 2 root root     15120 Oct  9 23:59 start_atlas.sh
[2025-10-10 05:43:53] drwxrwx--x 2 root root      4096 Oct  9 23:59 shared
[2025-10-10 05:43:53] -rw-r--r-- 2 root root    569678 Oct  9 23:59 input.tar.gz
[2025-10-10 05:43:53] -rw-r--r-- 1 root root      6136 Oct  9 23:59 init_data.xml
[2025-10-10 05:43:53] -rw-r--r-- 2 root root 219350128 Oct  9 23:59 EVNT.46676267._000772.pool.root.1
[2025-10-10 05:43:53] -rw-r--r-- 1 root root         0 Oct  9 23:59 boinc_lockfile
[2025-10-10 05:43:53] -rw-r--r-- 1 root root      2549 Oct  9 23:59 pandaJob.out
[2025-10-10 05:43:53] -rw------- 1 root root    975454 Oct  9 23:59 agis_schedconf.cvmfs.json
[2025-10-10 05:43:53] drwxr-xr-x 5  320  320      4096 Oct  9 23:59 pilot3
[2025-10-10 05:43:53] -rw------- 1 root root 194965021 Oct 10 05:42 HITS.46676269._018647.pool.root.1
[2025-10-10 05:43:53] -rw-r--r-- 1 root root       530 Oct 10 05:42 boinc_task_state.xml
[2025-10-10 05:43:53] -rw------- 1 root root      1032 Oct 10 05:42 memory_monitor_summary.json
[2025-10-10 05:43:53] -rw------- 1 root root   1560580 Oct 10 05:42 agis_ddmendpoints.agis.ALL.json
[2025-10-10 05:43:53] -rw------- 1 root root    461829 Oct 10 05:42 log.46676269._018647.job.log.tgz.1
[2025-10-10 05:43:53] -rw------- 1 root root        95 Oct 10 05:42 pilot_heartbeat.json
[2025-10-10 05:43:53] -rw------- 1 root root      7788 Oct 10 05:43 heartbeat.json
[2025-10-10 05:43:53] -rw-r--r-- 1 root root      8192 Oct 10 05:43 boinc_mmap_file
[2025-10-10 05:43:53] -rw-r--r-- 1 root root        28 Oct 10 05:43 wrapper_checkpoint.txt
[2025-10-10 05:43:53] -rw------- 1 root root      4756 Oct 10 05:43 pilotlog.txt
[2025-10-10 05:43:53] -rw------- 1 root root   2851125 Oct 10 05:43 log.46676269._018647.job.log.1
[2025-10-10 05:43:53] -rw------- 1 root root       357 Oct 10 05:43 output.list
[2025-10-10 05:43:53] -rw-r--r-- 1 root root       620 Oct 10 05:43 runtime_log
[2025-10-10 05:43:53] -rw------- 1 root root   3328000 Oct 10 05:43 result.tar.gz
[2025-10-10 05:43:53] -rw-r--r-- 1 root root      8767 Oct 10 05:43 runtime_log.err
[2025-10-10 05:43:53] -rw------- 1 root root       654 Oct 10 05:43 ERSNDmtp5Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX6ZNDmmi2tcm.diag
[2025-10-10 05:43:53] -rw-r--r-- 1 root root     21013 Oct 10 05:43 stderr.txt
[2025-10-10 05:43:53] HITS file was successfully produced:
[2025-10-10 05:43:53] -rw------- 1 root root 194965021 Oct 10 05:42 shared/HITS.pool.root.1
[2025-10-10 05:43:53]  *** Contents of shared directory: ***
[2025-10-10 05:43:53] total 408440
[2025-10-10 05:43:53] -rw-r--r-- 2 root root     15120 Oct  9 23:59 start_atlas.sh
[2025-10-10 05:43:53] -rw-r--r-- 2 root root    569678 Oct  9 23:59 input.tar.gz
[2025-10-10 05:43:53] -rw-r--r-- 2 root root 219350128 Oct  9 23:59 ATLAS.root_0
[2025-10-10 05:43:53] -rw------- 1 root root 194965021 Oct 10 05:42 HITS.pool.root.1
[2025-10-10 05:43:53] -rw------- 1 root root   3328000 Oct 10 05:43 result.tar.gz
05:43:55 (1369011): run_atlas exited; CPU time 40338.159266
05:43:55 (1369011): called boinc_finish(0)

</stderr_txt>
]]>

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