Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:06 (2904522): wrapper (7.7.26015): starting
17:20:06 (2904522): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 17:20:06] Arguments: --nthreads 8
[2025-10-09 17:20:06] Threads: 8
[2025-10-09 17:20:06] Checking for CVMFS
[2025-10-09 17:20:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 17:20:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 17:20:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 17:20:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 17:20:10] 2.13.2.0 941838 134300 247260 151524 0 64 32761565 32935937 21819 16776704 0 83799705 99.706 66692353 30037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 17:20:10] CVMFS is ok
[2025-10-09 17:20:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 17:20:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 17:20:10] Further information can be found at the LHC@home message board.
[2025-10-09 17:20:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 17:20:10] Checking for apptainer binary...
[2025-10-09 17:20:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 17:20:10] Running /usr/bin/apptainer --version
[2025-10-09 17:20:10] apptainer version 1.4.3-1.el9
[2025-10-09 17:20:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 17:20:11] c-6-7.aglt2.org
[2025-10-09 17:20:11] apptainer works
[2025-10-09 17:20:11] Set ATHENA_PROC_NUMBER=8
[2025-10-09 17:20:11] Set ATHENA_CORE_NUMBER=8
[2025-10-09 17:20:12] Starting ATLAS job with PandaID=6837343693
[2025-10-09 17:20:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:12:45]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:12:45] 2025-10-10 15:11:40,478 | INFO     | mean x: 1760077058.8194842
[2025-10-10 11:12:45] 2025-10-10 15:11:40,478 | INFO     | mean y: 2067159.7125119388
[2025-10-10 11:12:45] 2025-10-10 15:11:40,478 | INFO     | -- intersect: 3178370623.0522237
[2025-10-10 11:12:45] 2025-10-10 15:11:40,478 | INFO     | intersect: 3178370623.0522237
[2025-10-10 11:12:45] 2025-10-10 15:11:40,481 | INFO     | chi2: 7.910070458261541
[2025-10-10 11:12:45] 2025-10-10 15:11:40,496 | INFO     | sum of square deviations: 350808388704.00885
[2025-10-10 11:12:45] 2025-10-10 15:11:40,731 | INFO     | sum of deviations: -367039717183.215
[2025-10-10 11:12:45] 2025-10-10 15:11:40,761 | INFO     | mean x: 1760076906.3234165
[2025-10-10 11:12:45] 2025-10-10 15:11:40,762 | INFO     | mean y: 2075431.1727447216
[2025-10-10 11:12:45] 2025-10-10 15:11:40,762 | INFO     | -- intersect: 1843588207.7179096
[2025-10-10 11:12:45] 2025-10-10 15:11:40,762 | INFO     | intersect: 1843588207.7179096
[2025-10-10 11:12:45] 2025-10-10 15:11:40,763 | INFO     | chi2: 4.4283830547646685
[2025-10-10 11:12:45] 2025-10-10 15:11:40,764 | INFO     | current chi2=4.4283830547646685 (change=44.015883573584134 %)
[2025-10-10 11:12:45] 2025-10-10 15:11:40,765 | INFO     | sum of square deviations: 345782686388.1019
[2025-10-10 11:12:45] 2025-10-10 15:11:41,147 | INFO     | sum of deviations: -335991068303.3047
[2025-10-10 11:12:45] 2025-10-10 15:11:41,147 | INFO     | mean x: 1760076753.8273866
[2025-10-10 11:12:45] 2025-10-10 15:11:41,148 | INFO     | mean y: 2076373.193828351
[2025-10-10 11:12:45] 2025-10-10 15:11:41,148 | INFO     | -- intersect: 1712312576.7223368
[2025-10-10 11:12:45] 2025-10-10 15:11:41,148 | INFO     | intersect: 1712312576.7223368
[2025-10-10 11:12:45] 2025-10-10 15:11:41,149 | INFO     | chi2: 4.398523468224324
[2025-10-10 11:12:45] 2025-10-10 15:11:41,149 | INFO     | current chi2=4.398523468224324 (change=0.6742774094083233 %)
[2025-10-10 11:12:45] 2025-10-10 15:11:41,150 | INFO     | right removable region: 1036
[2025-10-10 11:12:45] 2025-10-10 15:11:41,175 | INFO     | sum of square deviations: 350807992937.29865
[2025-10-10 11:12:45] 2025-10-10 15:11:41,514 | INFO     | sum of deviations: -846460737376.1132
[2025-10-10 11:12:45] 2025-10-10 15:11:41,514 | INFO     | mean x: 1760077211.3214972
[2025-10-10 11:12:45] 2025-10-10 15:11:41,514 | INFO     | mean y: 2073291.5854126678
[2025-10-10 11:12:45] 2025-10-10 15:11:41,514 | INFO     | -- intersect: 4248944184.2915893
[2025-10-10 11:12:45] 2025-10-10 15:11:41,514 | INFO     | intersect: 4248944184.2915893
[2025-10-10 11:12:45] 2025-10-10 15:11:41,531 | INFO     | chi2: 5.694187109950461
[2025-10-10 11:12:45] 2025-10-10 15:11:41,532 | INFO     | current chi2=5.694187109950461 (change=28.01344640358719 %)
[2025-10-10 11:12:45] 2025-10-10 15:11:41,533 | INFO     | sum of square deviations: 345782085540.6384
[2025-10-10 11:12:45] 2025-10-10 15:11:42,379 | INFO     | sum of deviations: -928530560662.3104
[2025-10-10 11:12:45] 2025-10-10 15:11:42,379 | INFO     | mean x: 1760077363.8206365
[2025-10-10 11:12:45] 2025-10-10 15:11:42,379 | INFO     | mean y: 2075781.0144648023
[2025-10-10 11:12:45] 2025-10-10 15:11:42,379 | INFO     | -- intersect: 4728421331.513915
[2025-10-10 11:12:45] 2025-10-10 15:11:42,379 | INFO     | intersect: 4728421331.513915
[2025-10-10 11:12:45] 2025-10-10 15:11:42,492 | INFO     | chi2: 5.31014903222297
[2025-10-10 11:12:45] 2025-10-10 15:11:42,496 | INFO     | current chi2=5.31014903222297 (change=6.744388098107857 %)
[2025-10-10 11:12:45] 2025-10-10 15:11:42,496 | INFO     | left removable region: 20
[2025-10-10 11:12:45] 2025-10-10 15:11:42,497 | INFO     | sum of square deviations: 325197651022.2
[2025-10-10 11:12:45] 2025-10-10 15:11:43,024 | INFO     | monitor loop #2675: job 0:6837343693 is in state 'finished'
[2025-10-10 11:12:45] 2025-10-10 15:11:43,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 11:12:45] 2025-10-10 15:11:43,150 | INFO     | sum of deviations: -635082538605.7307
[2025-10-10 11:12:45] 2025-10-10 15:11:43,150 | INFO     | mean x: 1760077333.3287401
[2025-10-10 11:12:45] 2025-10-10 15:11:43,151 | INFO     | mean y: 2085887.843503937
[2025-10-10 11:12:45] 2025-10-10 15:11:43,151 | INFO     | -- intersect: 3439362809.9837365
[2025-10-10 11:12:45] 2025-10-10 15:11:43,151 | INFO     | intersect: 3439362809.9837365
[2025-10-10 11:12:45] 2025-10-10 15:11:43,328 | INFO     | chi2: 1.6509476992109173
[2025-10-10 11:12:45] 2025-10-10 15:11:43,329 | INFO     | -- intersect: 3439362809.9837365
[2025-10-10 11:12:45] 2025-10-10 15:11:43,329 | INFO     | current memory leak: -1.95 B/s (using 1016 data points, chi2=1.65)
[2025-10-10 11:12:45] 2025-10-10 15:11:43,330 | INFO     | could have reported an average CPU frequency of 2600 MHz (38 samples)
[2025-10-10 11:12:45] 2025-10-10 15:11:43,330 | INFO     | ..............................
[2025-10-10 11:12:45] 2025-10-10 15:11:43,330 | INFO     | . Timing measurements:
[2025-10-10 11:12:45] 2025-10-10 15:11:43,331 | INFO     | . get job = 1 s
[2025-10-10 11:12:45] 2025-10-10 15:11:43,331 | INFO     | . initial setup = 8 s
[2025-10-10 11:12:45] 2025-10-10 15:11:43,331 | INFO     | . payload setup = 67 s
[2025-10-10 11:12:45] 2025-10-10 15:11:43,331 | INFO     | . stage-in = 0 s
[2025-10-10 11:12:45] 2025-10-10 15:11:43,331 | INFO     | . payload execution = 63909 s
[2025-10-10 11:12:45] 2025-10-10 15:11:43,331 | INFO     | . stage-out = 16 s
[2025-10-10 11:12:45] 2025-10-10 15:11:43,331 | INFO     | . log creation = 2 s
[2025-10-10 11:12:45] 2025-10-10 15:11:43,331 | INFO     | ..............................
[2025-10-10 11:12:45] 2025-10-10 15:11:46,984 | INFO     | 
[2025-10-10 11:12:45] 2025-10-10 15:11:46,984 | INFO     | job summary report
[2025-10-10 11:12:45] 2025-10-10 15:11:46,984 | INFO     | --------------------------------------------------
[2025-10-10 11:12:45] 2025-10-10 15:11:46,984 | INFO     | PanDA job id: 6837343693
[2025-10-10 11:12:45] 2025-10-10 15:11:46,984 | INFO     | task id: 46676269
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | errors: (none)
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | pilot state: finished 
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | transexitcode: 0
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | exeerrorcode: 0
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | exeerrordiag: 
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | exitcode: 0
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | exitmsg: OK
[2025-10-10 11:12:45] 2025-10-10 15:11:46,985 | INFO     | cpuconsumptiontime: 51332 s
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | nevents: 400
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | neventsw: 0
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | pid: 2921243
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | pgrp: 2921243
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | corecount: 8
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | event service: False
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | sizes: {0: 2347976, 1: 2348577, 3: 2348661, 4: 2348717, 5: 2348916, 6: 2348944, 17: 2349100, 28: 2349128, 40: 2349156, 52: 2349184, 64: 2349810, 76: 2349810, 63980
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | --------------------------------------------------
[2025-10-10 11:12:45] 2025-10-10 15:11:46,986 | INFO     | 
[2025-10-10 11:12:45] 2025-10-10 15:11:46,987 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 11:12:45] 2025-10-10 15:11:47,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 11:12:45] 2025-10-10 15:11:47,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 11:12:45] 2025-10-10 15:11:47,355 | INFO     | job 6837343693 has completed (purged errors)
[2025-10-10 11:12:45] 2025-10-10 15:11:47,434 | INFO     | overall cleanup function is called
[2025-10-10 11:12:45] 2025-10-10 15:11:47,865 | INFO     | PID=2910955 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:12:45] 2025-10-10 15:11:47,866 | INFO     | .. there are 43 such processes running
[2025-10-10 11:12:45] 2025-10-10 15:11:48,443 | INFO     | --- collectZombieJob: --- 10, [2921243]
[2025-10-10 11:12:45] 2025-10-10 15:11:48,443 | INFO     | zombie collector waiting for pid 2921243
[2025-10-10 11:12:45] 2025-10-10 15:11:48,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 11:12:45] 2025-10-10 15:11:48,443 | INFO     | collected zombie processes
[2025-10-10 11:12:45] 2025-10-10 15:11:48,444 | INFO     | will attempt to kill all subprocesses of pid=2921243
[2025-10-10 11:12:45] 2025-10-10 15:11:55,375 | INFO     | process IDs to be killed: [2921243] (in reverse order)
[2025-10-10 11:12:45] 2025-10-10 15:11:56,895 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 11:12:45] 2025-10-10 15:11:56,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 11:12:45] 2025-10-10 15:11:56,968 | INFO     | did not find any defunct processes belonging to 2921243
[2025-10-10 11:12:45] 2025-10-10 15:11:57,377 | INFO     | did not find any defunct processes belonging to 2921243
[2025-10-10 11:12:45] 2025-10-10 15:11:57,378 | INFO     | ready for new job
[2025-10-10 11:12:45] 2025-10-10 15:11:57,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 11:12:45] 2025-10-10 15:11:57,531 | INFO     | ***************************************
[2025-10-10 11:12:45] 2025-10-10 15:11:57,531 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 11:12:45] 2025-10-10 15:11:57,531 | INFO     | ***************************************
[2025-10-10 11:12:45] 2025-10-10 15:11:57,531 | INFO     | 
[2025-10-10 11:12:45] 2025-10-10 15:11:57,557 | INFO     | architecture information:
[2025-10-10 11:12:45] 2025-10-10 15:11:57,580 | INFO     | executing command: cat /etc/os-release
[2025-10-10 11:12:45] 2025-10-10 15:11:57,784 | INFO     | cat /etc/os-release:
[2025-10-10 11:12:45] NAME="CentOS Linux"
[2025-10-10 11:12:45] VERSION="7 (Core)"
[2025-10-10 11:12:45] ID="centos"
[2025-10-10 11:12:45] ID_LIKE="rhel fedora"
[2025-10-10 11:12:45] VERSION_ID="7"
[2025-10-10 11:12:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 11:12:45] ANSI_COLOR="0;31"
[2025-10-10 11:12:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 11:12:45] HOME_URL="https://www.centos.org/"
[2025-10-10 11:12:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 11:12:45] 
[2025-10-10 11:12:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 11:12:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 11:12:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 11:12:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 11:12:45] 
[2025-10-10 11:12:45] 2025-10-10 15:11:57,784 | INFO     | ***************************************
[2025-10-10 11:12:45] 2025-10-10 15:11:58,288 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 11:12:45] 2025-10-10 15:11:58,585 | INFO     | sufficient remaining disk space (74548510720 B)
[2025-10-10 11:12:45] 2025-10-10 15:11:58,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 11:12:45] 2025-10-10 15:11:58,586 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 11:12:45] 2025-10-10 15:11:58,586 | INFO     | update_server=False
[2025-10-10 11:12:45] 2025-10-10 15:11:58,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 11:12:45] 2025-10-10 15:11:58,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:12:45] 2025-10-10 15:11:58,884 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 11:12:45] 2025-10-10 15:11:58,884 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 11:12:45] 2025-10-10 15:11:58,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:12:45] 2025-10-10 15:11:58,885 | INFO     | will abort loop
[2025-10-10 11:12:45] 2025-10-10 15:11:58,903 | INFO     | all payload control threads have been joined
[2025-10-10 11:12:45] 2025-10-10 15:11:58,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 11:12:45] 2025-10-10 15:11:59,121 | INFO     | all data control threads have been joined
[2025-10-10 11:12:45] 2025-10-10 15:11:59,642 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:11:59,886 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:11:59,902 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:11:59,910 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:11:59,911 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:11:59,911 | INFO     | [payload] control thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:11:59,926 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:00,059 | INFO     | all job control threads have been joined
[2025-10-10 11:12:45] 2025-10-10 15:12:00,150 | INFO     | [data] control thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:00,225 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:00,326 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:00,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:12:45] 2025-10-10 15:12:00,917 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:00,956 | INFO     | [job] validate thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:01,068 | INFO     | [job] control thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:01,187 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:01,524 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:02,655 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:12:45] 2025-10-10 15:12:16,777 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:12:45] 2025-10-10 15:12:18,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140685979670336)>', '<ExcThread(monitor, started 140685252478720)>']
[2025-10-10 11:12:45] 2025-10-10 15:12:22,876 | INFO     | PID=2910955 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:12:45] 2025-10-10 15:12:22,876 | INFO     | .. there are 43 such processes running
[2025-10-10 11:12:45] 2025-10-10 15:12:22,877 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:12:45] 2025-10-10 15:12:22,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:12:45] 2025-10-10 15:12:22,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:12:45] 2025-10-10 15:12:22,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:12:45] 2025-10-10 15:12:22,877 | INFO     | [monitor] control thread has ended
[2025-10-10 11:12:45] 2025-10-10 15:12:23,180 | INFO     | all workflow threads have been joined
[2025-10-10 11:12:45] 2025-10-10 15:12:23,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:12:45] 2025-10-10 15:12:23,180 | INFO     | traces error code: 0
[2025-10-10 11:12:45] 2025-10-10 15:12:23,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:12:45] 2025-10-10 15:12:23,714 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:12:45] 2025-10-10 15:12:23,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:12:45] 2025-10-10 15:12:23,742 [wrapper] pilotpid: 2910955
[2025-10-10 11:12:45] 2025-10-10 15:12:23,745 [wrapper] Pilot exit status: 0
[2025-10-10 11:12:45] 2025-10-10 15:12:23,885 [wrapper] pandaids: 6837343693
[2025-10-10 11:12:45] 2025-10-10 15:12:24,190 [wrapper] cleanup supervisor_pilot 2697475 2910956
[2025-10-10 11:12:45] 2025-10-10 15:12:24,253 [wrapper] Test setup, not cleaning
[2025-10-10 11:12:45] 2025-10-10 15:12:24,396 [wrapper] apfmon messages muted
[2025-10-10 11:12:45] 2025-10-10 15:12:24,428 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:12:45] 2025-10-10 15:12:24,480 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:12:45]  *** Error codes and diagnostics ***
[2025-10-10 11:12:45]     "exeErrorCode": 0,
[2025-10-10 11:12:45]     "exeErrorDiag": "",
[2025-10-10 11:12:45]     "pilotErrorCode": 0,
[2025-10-10 11:12:45]     "pilotErrorDiag": "",
[2025-10-10 11:12:45]  *** Listing of results directory ***
[2025-10-10 11:12:45] total 423588
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 09:21 pilot3.tar.gz
[2025-10-10 11:12:45] -rwx------. 1 boincer umatlas     36292 Oct  9 09:22 runpilot2-wrapper.sh
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 09:22 queuedata.json
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas       100 Oct  9 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:12:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 17:20 run_atlas
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas       105 Oct  9 17:20 job.xml
[2025-10-10 11:12:45] -rw-r--r--. 2 boincer umatlas 219350128 Oct  9 17:20 EVNT.46676267._000772.pool.root.1
[2025-10-10 11:12:45] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 17:20 shared
[2025-10-10 11:12:45] -rw-r--r--. 2 boincer umatlas    569672 Oct  9 17:20 input.tar.gz
[2025-10-10 11:12:45] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 17:20 start_atlas.sh
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas         0 Oct  9 17:20 boinc_lockfile
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas      2548 Oct  9 17:20 pandaJob.out
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas    975454 Oct  9 17:21 agis_schedconf.cvmfs.json
[2025-10-10 11:12:45] drwx------. 5 boincer umatlas      4096 Oct  9 17:21 pilot3
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas 195997099 Oct 10 11:04 HITS.46676269._018639.pool.root.1
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas       531 Oct 10 11:05 boinc_task_state.xml
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas      6658 Oct 10 11:09 init_data.xml
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas      1054 Oct 10 11:10 memory_monitor_summary.json
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas   1560580 Oct 10 11:10 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas    972601 Oct 10 11:10 log.46676269._018639.job.log.tgz.1
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas      7845 Oct 10 11:11 heartbeat.json
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas        95 Oct 10 11:12 pilot_heartbeat.json
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas      5010 Oct 10 11:12 pilotlog.txt
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas   6282957 Oct 10 11:12 log.46676269._018639.job.log.1
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas       357 Oct 10 11:12 output.list
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas       620 Oct 10 11:12 runtime_log
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas   7270400 Oct 10 11:12 result.tar.gz
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas       660 Oct 10 11:12 zjgLDmcm5Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms5ZNDmN6gsIn.diag
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas      8689 Oct 10 11:12 runtime_log.err
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 11:12 boinc_mmap_file
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas        28 Oct 10 11:12 wrapper_checkpoint.txt
[2025-10-10 11:12:45] -rw-r--r--. 1 boincer umatlas     21243 Oct 10 11:12 stderr.txt
[2025-10-10 11:12:45] HITS file was successfully produced:
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas 195997099 Oct 10 11:04 shared/HITS.pool.root.1
[2025-10-10 11:12:45]  *** Contents of shared directory: ***
[2025-10-10 11:12:45] total 413296
[2025-10-10 11:12:45] -rw-r--r--. 2 boincer umatlas 219350128 Oct  9 17:20 ATLAS.root_0
[2025-10-10 11:12:45] -rw-r--r--. 2 boincer umatlas    569672 Oct  9 17:20 input.tar.gz
[2025-10-10 11:12:45] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 17:20 start_atlas.sh
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas 195997099 Oct 10 11:04 HITS.pool.root.1
[2025-10-10 11:12:45] -rw-------. 1 boincer umatlas   7270400 Oct 10 11:12 result.tar.gz
11:12:47 (2904522): run_atlas exited; CPU time 53750.415577
11:12:47 (2904522): called boinc_finish(0)

</stderr_txt>
]]>

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