Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 19:04:12 (8924): vboxwrapper version 26210
2025-10-09 19:04:12 (8924): BOINC client version: 8.0.2
2025-10-09 19:04:13 (8924): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-09 19:04:14 (8924): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 19:04:14 (8924): Create VM. (boinc_2408a3390f902c65, slot#4)
2025-10-09 19:04:14 (8924): Setting Memory Size for VM. (4100MB)
2025-10-09 19:04:15 (8924): Setting CPU Count for VM. (1)
2025-10-09 19:04:15 (8924): Setting Chipset Options for VM.
2025-10-09 19:04:16 (8924): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 19:04:16 (8924): Setting Boot Options for VM.
2025-10-09 19:04:16 (8924): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 19:04:17 (8924): Enabling VM Network Access.
2025-10-09 19:04:17 (8924): Disabling USB Support for VM.
2025-10-09 19:04:17 (8924): Disabling COM Port Support for VM.
2025-10-09 19:04:17 (8924): Disabling LPT Port Support for VM.
2025-10-09 19:04:18 (8924): Disabling Audio Support for VM.
2025-10-09 19:04:18 (8924): Disabling Clipboard Support for VM.
2025-10-09 19:04:18 (8924): Disabling Drag and Drop Support for VM.
2025-10-09 19:04:19 (8924): Adding storage controller(s) to VM.
2025-10-09 19:04:19 (8924): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 19:04:21 (8924): Adding VirtualBox Guest Additions to VM.
2025-10-09 19:04:22 (8924): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 19:04:22 (8924): forwarding host port 64807 to guest port 80
2025-10-09 19:04:22 (8924): Enabling remote desktop for VM.
2025-10-09 19:04:22 (8924): Required extension pack not installed, remote desktop not enabled.
2025-10-09 19:04:22 (8924): Enabling shared directory for VM.
2025-10-09 19:04:23 (8924): Starting VM using VBoxManage interface. (boinc_2408a3390f902c65, slot#4)
2025-10-09 19:04:29 (8924): Successfully started VM. (PID = '3848')
2025-10-09 19:04:29 (8924): Reporting VM Process ID to BOINC.
2025-10-09 19:04:29 (8924): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-09 19:04:29 (8924): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 19:04:29 (8924): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 19:04:29 (8924): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 19:04:29 (8924): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 19:04:29 (8924): Detected: Web Application Enabled (http://localhost:64807)
2025-10-09 19:04:29 (8924): Preference change detected
2025-10-09 19:04:29 (8924): Setting CPU throttle for VM. (100%)
2025-10-09 19:04:29 (8924): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 19:04:31 (8924): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 19:04:31 (8924): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 19:04:34 (8924): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 19:04:34 (8924): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 19:04:34 (8924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 19:04:40 (8924): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 19:04:40 (8924): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 19:04:53 (8924): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 19:04:53 (8924): Guest Log: 00:00:00.000142 main     Log opened 2025-10-09T19:04:51.868371000Z
2025-10-09 19:04:53 (8924): Guest Log: 00:00:00.000245 main     OS Product: Linux
2025-10-09 19:04:53 (8924): Guest Log: 00:00:00.000277 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 19:04:53 (8924): Guest Log: 00:00:00.000302 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 19:04:53 (8924): Guest Log: 00:00:00.000326 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 19:04:53 (8924): Guest Log: 00:00:00.000326 main     Process ID: 1257
2025-10-09 19:04:53 (8924): Guest Log: 00:00:00.000327 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 19:04:53 (8924): Guest Log: 00:00:00.001520 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 19:04:53 (8924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 19:04:53 (8924): Guest Log: [INFO] Mounting shared directory
2025-10-09 19:04:53 (8924): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 19:04:58 (8924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 19:04:58 (8924): Guest Log: [INFO] Detected branch: prod
2025-10-09 19:04:59 (8924): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 19:04:59 (8924): Guest Log: Copying input files
2025-10-09 19:05:00 (8924): Guest Log: Copied input files into RunAtlas.
2025-10-09 19:05:00 (8924): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 19:05:00 (8924): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 19:05:00 (8924): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 19:05:00 (8924): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 19:05:02 (8924): Guest Log: 00:00:10.012069 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 923 271 000ns (GuestNow=1 760 029 502 956 497 000 ns GuestLast=1 760 036 691 879 768 000 ns fSetTimeLastLoop=true )
2025-10-09 19:05:15 (8924): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 19:05:16 (8924): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 19:05:16 (8924): Guest Log: 2.6.3.0 1526 0 32292 151514 3 1 3120538 4096000 0 65024 0 0 n/a 1292 2494 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 19:05:20 (8924): Guest Log: copied the webapp to /var/www
2025-10-09 19:05:20 (8924): Guest Log: core_number=1
2025-10-09 19:05:21 (8924): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 19:05:21 (8924): Guest Log:  *** Starting ATLAS job. (PandaID=6837336694 taskID=46676269) ***
2025-10-09 20:46:40 (8924): Status Report: Elapsed Time: '6000.000000'
2025-10-09 20:46:40 (8924): Status Report: CPU Time: '5935.234375'
2025-10-09 22:29:50 (8924): Status Report: Elapsed Time: '12000.000000'
2025-10-09 22:29:50 (8924): Status Report: CPU Time: '11745.859375'
2025-10-10 00:12:36 (8924): Status Report: Elapsed Time: '18000.000000'
2025-10-10 00:12:36 (8924): Status Report: CPU Time: '17745.390625'
2025-10-10 01:54:15 (8924): Status Report: Elapsed Time: '24000.000000'
2025-10-10 01:54:15 (8924): Status Report: CPU Time: '23754.109375'
2025-10-10 03:24:41 (8924): Preference change detected
2025-10-10 03:24:41 (8924): Setting CPU throttle for VM. (100%)
2025-10-10 03:24:41 (8924): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 03:35:58 (8924): Status Report: Elapsed Time: '30000.000000'
2025-10-10 03:35:58 (8924): Status Report: CPU Time: '29783.140625'
2025-10-10 05:17:18 (8924): Status Report: Elapsed Time: '36000.000000'
2025-10-10 05:17:18 (8924): Status Report: CPU Time: '35811.421875'
2025-10-10 06:50:57 (8924): Guest Log:  *** Job finished ***
2025-10-10 06:50:57 (8924): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:31,913 | INFO     | [data] copytool_out thread has finished
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:32,862 | INFO     | [data] queue_monitor thread has finished
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:51,305 | INFO     | [monitor] cgroup control has ended
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:51,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638867019584)>', '<ExcThread(monitor, started 140638284666624)>']
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:51,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:51,892 | INFO     | [monitor] control thread has ended
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:56,535 | INFO     | all workflow threads have been joined
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:56,535 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:56,535 | INFO     | traces error code: 0
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:56,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:56,708 [wrapper] ==== pilot stdout END ====
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:56,711 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:56,715 [wrapper] pilotpid: 5870
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:56,719 [wrapper] Pilot exit status: 0
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:57,119 [wrapper] pandaids: 6837336694
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:57,139 [wrapper] cleanup supervisor_pilot 25709 5871
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:57,143 [wrapper] Test setup, not cleaning
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:57,146 [wrapper] apfmon messages muted
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:57,150 [wrapper] ==== wrapper stdout END ====
2025-10-10 06:50:57 (8924): Guest Log: 2025-10-10 04:50:57,153 [wrapper] ==== wrapper stderr END ====
2025-10-10 06:50:57 (8924): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 06:50:57 (8924): Guest Log:     "exeErrorCode": 0,
2025-10-10 06:50:57 (8924): Guest Log:     "exeErrorDiag": "",
2025-10-10 06:50:57 (8924): Guest Log:     "pilotErrorCode": 0,
2025-10-10 06:50:57 (8924): Guest Log:     "pilotErrorDiag": "",
2025-10-10 06:50:57 (8924): Guest Log:  *** Listing of results directory ***
2025-10-10 06:50:57 (8924): Guest Log: total 210640
2025-10-10 06:50:57 (8924): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 11:59 pilot3.tar.gz
2025-10-10 06:50:57 (8924): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 11:59 runpilot2-wrapper.sh
2025-10-10 06:50:57 (8924): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 11:59 queuedata.json
2025-10-10 06:50:57 (8924): Guest Log: -rwxr-xr-x. 1 atlas atlas      9273 Oct  9 17:05 init_data.xml
2025-10-10 06:50:57 (8924): Guest Log: -rwxr-xr-x. 1 atlas atlas    569671 Oct  9 17:05 input.tar.gz
2025-10-10 06:50:57 (8924): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 17:05 start_atlas.sh
2025-10-10 06:50:57 (8924): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 17:05 EVNT.46676267._000681.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 06:50:57 (8924): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct  9 17:05 pandaJob.out
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas    975462 Oct  9 17:06 agis_schedconf.cvmfs.json
2025-10-10 06:50:57 (8924): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 17:06 pilot3
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas 198832431 Oct 10 04:49 HITS.46676269._016510.pool.root.1
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 04:50 pilot_heartbeat.json
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 10 04:50 memory_monitor_summary.json
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 04:50 agis_ddmendpoints.agis.ALL.json
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas    736768 Oct 10 04:50 log.46676269._016510.job.log.tgz.1
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas      7783 Oct 10 04:50 heartbeat.json
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 10 04:50 pilotlog.txt
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas   5776317 Oct 10 04:50 log.46676269._016510.job.log.1
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 04:50 output.list
2025-10-10 06:50:57 (8924): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 04:50 runtime_log
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas   6533120 Oct 10 04:50 result.tar.gz
2025-10-10 06:50:57 (8924): Guest Log: -rw-r--r--. 1 atlas atlas      8494 Oct 10 04:50 runtime_log.err
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas       653 Oct 10 04:50 bt3KDmMU4Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSjZNDmnwHcCo.diag
2025-10-10 06:50:57 (8924): Guest Log: Looking for outputfile HITS.46676269._016510.pool.root.1
2025-10-10 06:50:57 (8924): Guest Log: HITS file was successfully produced
2025-10-10 06:50:57 (8924): Guest Log: -rw-------. 1 atlas atlas 198832431 Oct 10 04:49 /home/atlas/RunAtlas/HITS.46676269._016510.pool.root.1
2025-10-10 06:50:59 (8924): Guest Log: Successfully finished the ATLAS job!
2025-10-10 06:50:59 (8924): Guest Log: Copying the results back to the shared directory!
2025-10-10 06:50:59 (8924): Guest Log:  *** Contents of shared directory: ***
2025-10-10 06:50:59 (8924): Guest Log: total 416992
2025-10-10 06:50:59 (8924): Guest Log: -rwxrwxrwx. 1 root root 221027081 Oct  9 17:04 ATLAS.root_0
2025-10-10 06:50:59 (8924): Guest Log: -rwxrwxrwx. 1 root root 198832431 Oct 10 04:50 HITS.pool.root.1
2025-10-10 06:50:59 (8924): Guest Log: -rwxrwxrwx. 1 root root      9273 Oct  9 17:04 init_data.xml
2025-10-10 06:50:59 (8924): Guest Log: -rwxrwxrwx. 1 root root    569671 Oct  9 16:57 input.tar.gz
2025-10-10 06:50:59 (8924): Guest Log: -rwxrwxrwx. 1 root root   6533120 Oct 10 04:50 result.tar.gz
2025-10-10 06:50:59 (8924): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  9 16:57 start_atlas.sh
2025-10-10 06:50:59 (8924): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 06:50:59 (8924): VM Completion File Detected.
2025-10-10 06:50:59 (8924): Powering off VM.
2025-10-10 06:51:01 (8924): Successfully stopped VM.
2025-10-10 06:51:01 (8924): Deregistering VM. (boinc_2408a3390f902c65, slot#4)
2025-10-10 06:51:01 (8924): Removing network bandwidth throttle group from VM.
2025-10-10 06:51:01 (8924): Removing VM from VirtualBox.
2025-10-10 06:51:07 (8924): called boinc_finish(0)

</stderr_txt>
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