Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:18:02 (1582861): wrapper (7.7.26015): starting
20:18:02 (1582861): wrapper: running run_atlas (--nthreads 3)
[2025-10-09 20:18:02] Arguments: --nthreads 3
[2025-10-09 20:18:02] Threads: 3
[2025-10-09 20:18:02] Checking for CVMFS
[2025-10-09 20:18:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 20:18:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 20:18:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 20:18:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 20:18:02] 2.9.2.0 1532479 167 54836 151520 1 56 29277184 36864001 0 130560 0 131348 99.978 9418 1080 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-09 20:18:02] CVMFS is ok
[2025-10-09 20:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 20:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 20:18:02] Further information can be found at the LHC@home message board.
[2025-10-09 20:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 20:18:02] Checking for apptainer binary...
[2025-10-09 20:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 20:18:02] Running /usr/bin/apptainer --version
[2025-10-09 20:18:02] apptainer version 1.4.1-1.1
[2025-10-09 20:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 20:18:02] magicA161
[2025-10-09 20:18:02] apptainer works
[2025-10-09 20:18:02] Set ATHENA_PROC_NUMBER=3
[2025-10-09 20:18:02] Set ATHENA_CORE_NUMBER=3
[2025-10-09 20:18:02] Starting ATLAS job with PandaID=6837338712
[2025-10-09 20:18:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 21:39:26]  *** The last 200 lines of the pilot log: ***
[2025-10-09 21:39:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 21:39:26] 
[2025-10-09 21:39:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 21:39:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 21:39:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 21:39:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 21:39:26] 
[2025-10-09 21:39:26] 2025-10-09 19:39:08,805 | INFO     | ***************************************
[2025-10-09 21:39:26] 2025-10-09 19:39:09,309 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-09 21:39:26] 2025-10-09 19:39:09,321 | INFO     | sufficient remaining disk space (376518475776 B)
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | INFO     | update_server=False
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 21:39:26] 2025-10-09 19:39:09,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 21:39:26] 2025-10-09 19:39:09,388 | INFO     | all data control threads have been joined
[2025-10-09 21:39:26] 2025-10-09 19:39:09,429 | INFO     | all payload control threads have been joined
[2025-10-09 21:39:26] 2025-10-09 19:39:09,613 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 21:39:26] 2025-10-09 19:39:09,613 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 21:39:26] 2025-10-09 19:39:09,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:39:26] 2025-10-09 19:39:09,613 | INFO     | will abort loop
[2025-10-09 21:39:26] 2025-10-09 19:39:10,010 | INFO     | all job control threads have been joined
[2025-10-09 21:39:26] 2025-10-09 19:39:10,328 | INFO     | [job] retrieve thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:10,328 | INFO     | [job] queue monitor thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:10,347 | INFO     | [payload] failed_post thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:10,394 | INFO     | [data] control thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:10,434 | INFO     | [payload] control thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:10,619 | INFO     | [job] job monitor thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:10,888 | INFO     | [data] copytool_in thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:11,016 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:11,016 | INFO     | [job] control thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:11,210 | INFO     | [job] validate thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:11,217 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:11,321 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:11,328 | INFO     | [data] copytool_out thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:11,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 21:39:26] 2025-10-09 19:39:11,848 | INFO     | [payload] validate_post thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:14,794 | INFO     | [monitor] cgroup control has ended
[2025-10-09 21:39:26] 2025-10-09 19:39:15,372 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:19,884 | INFO     | job.realtimelogging is not enabled
[2025-10-09 21:39:26] 2025-10-09 19:39:20,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 21:39:26] 2025-10-09 19:39:21,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121802598208)>', '<ExcThread(monitor, started 140121445734144)>']
[2025-10-09 21:39:26] 2025-10-09 19:39:21,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 21:39:26] 2025-10-09 19:39:21,387 | INFO     | [monitor] control thread has ended
[2025-10-09 21:39:26] 2025-10-09 19:39:26,094 | INFO     | all workflow threads have been joined
[2025-10-09 21:39:26] 2025-10-09 19:39:26,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 21:39:26] 2025-10-09 19:39:26,095 | INFO     | traces error code: 0
[2025-10-09 21:39:26] 2025-10-09 19:39:26,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 21:39:26] 2025-10-09 19:39:26,146 [wrapper] ==== pilot stdout END ====
[2025-10-09 21:39:26] 2025-10-09 19:39:26,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 21:39:26] 2025-10-09 19:39:26,151 [wrapper] pilotpid: 1586591
[2025-10-09 21:39:26] 2025-10-09 19:39:26,153 [wrapper] Pilot exit status: 0
[2025-10-09 21:39:26] 2025-10-09 19:39:26,161 [wrapper] pandaids: 6837338712
[2025-10-09 21:39:26] 2025-10-09 19:39:26,177 [wrapper] cleanup supervisor_pilot 1605062 1586592
[2025-10-09 21:39:26] 2025-10-09 19:39:26,180 [wrapper] Test setup, not cleaning
[2025-10-09 21:39:26] 2025-10-09 19:39:26,182 [wrapper] apfmon messages muted
[2025-10-09 21:39:26] 2025-10-09 19:39:26,185 [wrapper] ==== wrapper stdout END ====
[2025-10-09 21:39:26] 2025-10-09 19:39:26,187 [wrapper] ==== wrapper stderr END ====
[2025-10-09 21:39:26]  *** Error codes and diagnostics ***
[2025-10-09 21:39:26]     "exeErrorCode": 0,
[2025-10-09 21:39:26]     "exeErrorDiag": "",
[2025-10-09 21:39:26]     "pilotErrorCode": 0,
[2025-10-09 21:39:26]     "pilotErrorDiag": "",
[2025-10-09 21:39:26]  *** Listing of results directory ***
[2025-10-09 21:39:26] total 409892
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc    557409 Oct  9 14:33 pilot3.tar.gz
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc      5112 Oct  9 14:39 queuedata.json
[2025-10-09 21:39:26] -rwx------ 1 boinc boinc     36292 Oct  9 14:40 runpilot2-wrapper.sh
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc       100 Oct  9 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 21:39:26] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 20:18 run_atlas
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc       105 Oct  9 20:18 job.xml
[2025-10-09 21:39:26] -rw-r--r-- 2 boinc boinc 220604300 Oct  9 20:18 EVNT.46676267._000730.pool.root.1
[2025-10-09 21:39:26] -rw-r--r-- 2 boinc boinc    569680 Oct  9 20:18 input.tar.gz
[2025-10-09 21:39:26] -rw-r--r-- 2 boinc boinc     15120 Oct  9 20:18 start_atlas.sh
[2025-10-09 21:39:26] drwxrwx--x 2 boinc boinc      4096 Oct  9 20:18 shared
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc         0 Oct  9 20:18 boinc_setup_complete
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc      6449 Oct  9 20:18 init_data.xml
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc         0 Oct  9 20:18 boinc_lockfile
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc      2549 Oct  9 20:18 pandaJob.out
[2025-10-09 21:39:26] -rw------- 1 boinc boinc    975446 Oct  9 20:18 agis_schedconf.cvmfs.json
[2025-10-09 21:39:26] -rw------- 1 boinc boinc   1560401 Oct  9 20:18 agis_ddmendpoints.agis.ALL.json
[2025-10-09 21:39:26] drwx------ 5 boinc boinc      4096 Oct  9 20:18 pilot3
[2025-10-09 21:39:26] -rw------- 1 boinc boinc        95 Oct  9 21:38 pilot_heartbeat.json
[2025-10-09 21:39:26] -rw------- 1 boinc boinc 193303726 Oct  9 21:38 HITS.46676269._017617.pool.root.1
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc       529 Oct  9 21:38 boinc_task_state.xml
[2025-10-09 21:39:26] -rw------- 1 boinc boinc      1016 Oct  9 21:38 memory_monitor_summary.json
[2025-10-09 21:39:26] -rw------- 1 boinc boinc    251749 Oct  9 21:38 log.46676269._017617.job.log.tgz.1
[2025-10-09 21:39:26] -rw------- 1 boinc boinc      7758 Oct  9 21:39 heartbeat.json
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc      8192 Oct  9 21:39 boinc_mmap_file
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc        27 Oct  9 21:39 wrapper_checkpoint.txt
[2025-10-09 21:39:26] -rw------- 1 boinc boinc      4814 Oct  9 21:39 pilotlog.txt
[2025-10-09 21:39:26] -rw------- 1 boinc boinc    714420 Oct  9 21:39 log.46676269._017617.job.log.1
[2025-10-09 21:39:26] -rw------- 1 boinc boinc       357 Oct  9 21:39 output.list
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc       620 Oct  9 21:39 runtime_log
[2025-10-09 21:39:26] -rw------- 1 boinc boinc    983040 Oct  9 21:39 result.tar.gz
[2025-10-09 21:39:26] -rw------- 1 boinc boinc       661 Oct  9 21:39 x0pKDml74Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0uZNDm9ZivBn.diag
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc      8792 Oct  9 21:39 runtime_log.err
[2025-10-09 21:39:26] -rw-r--r-- 1 boinc boinc      8543 Oct  9 21:39 stderr.txt
[2025-10-09 21:39:26] HITS file was successfully produced:
[2025-10-09 21:39:26] -rw------- 1 boinc boinc 193303726 Oct  9 21:38 shared/HITS.pool.root.1
[2025-10-09 21:39:26]  *** Contents of shared directory: ***
[2025-10-09 21:39:26] total 405756
[2025-10-09 21:39:26] -rw-r--r-- 2 boinc boinc 220604300 Oct  9 20:18 ATLAS.root_0
[2025-10-09 21:39:26] -rw-r--r-- 2 boinc boinc    569680 Oct  9 20:18 input.tar.gz
[2025-10-09 21:39:26] -rw-r--r-- 2 boinc boinc     15120 Oct  9 20:18 start_atlas.sh
[2025-10-09 21:39:26] -rw------- 1 boinc boinc 193303726 Oct  9 21:38 HITS.pool.root.1
[2025-10-09 21:39:26] -rw------- 1 boinc boinc    983040 Oct  9 21:39 result.tar.gz
21:39:28 (1582861): run_atlas exited; CPU time 13899.494864
21:39:28 (1582861): called boinc_finish(0)

</stderr_txt>
]]>

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