Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:38:44 (1717422): wrapper (7.7.26015): starting
20:38:44 (1717422): wrapper: running run_atlas (--nthreads 3)
[2025-10-09 20:38:44] Arguments: --nthreads 3
[2025-10-09 20:38:44] Threads: 3
[2025-10-09 20:38:44] Checking for CVMFS
[2025-10-09 20:38:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 20:38:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 20:38:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 20:38:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 20:38:44] 2.9.2.0 1638022 254 55612 151520 1 57 5174116 36864000 0 130560 0 197038 99.994 6608 342 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-09 20:38:44] CVMFS is ok
[2025-10-09 20:38:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 20:38:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 20:38:44] Further information can be found at the LHC@home message board.
[2025-10-09 20:38:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 20:38:44] Checking for apptainer binary...
[2025-10-09 20:38:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 20:38:44] Running /usr/bin/apptainer --version
[2025-10-09 20:38:44] apptainer version 1.4.1-1.1
[2025-10-09 20:38:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 20:38:44] atlasA143
[2025-10-09 20:38:44] apptainer works
[2025-10-09 20:38:44] Set ATHENA_PROC_NUMBER=3
[2025-10-09 20:38:44] Set ATHENA_CORE_NUMBER=3
[2025-10-09 20:38:44] Starting ATLAS job with PandaID=6837332758
[2025-10-09 20:38:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 22:02:02]  *** The last 200 lines of the pilot log: ***
[2025-10-09 22:02:02]  protocol_id=None
[2025-10-09 22:02:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-09 22:02:02]  replicas=None
[2025-10-09 22:02:02]  scope=mc23_13p6TeV
[2025-10-09 22:02:02]  status=None
[2025-10-09 22:02:02]  status_code=0
[2025-10-09 22:02:02]  storage_token=
[2025-10-09 22:02:02]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6837332758/log.46676269._015380.job.log.tgz.1
[2025-10-09 22:02:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/de/log.46676269._015380.job.log.tgz.1
[2025-10-09 22:02:02]  workdir=None
[2025-10-09 22:02:02] ]
[2025-10-09 22:02:02] 2025-10-09 20:01:01,924 | INFO     | transferring file log.46676269._015380.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6837332758/log.46676269._015380.job.log.tgz.1 to /local/data/boinc/
[2025-10-09 22:02:02] 2025-10-09 20:01:01,924 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6837332758/log.46676269._015380.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0153
[2025-10-09 22:02:02] 2025-10-09 20:01:01,937 | INFO     | adding to output.list: log.46676269._015380.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/de/log.46676269._015380.job.log.tg
[2025-10-09 22:02:02] 2025-10-09 20:01:01,938 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 22:02:02] 2025-10-09 20:01:01,938 | INFO     | summary of transferred files:
[2025-10-09 22:02:02] 2025-10-09 20:01:01,938 | INFO     |  -- lfn=log.46676269._015380.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 22:02:02] 2025-10-09 20:01:01,938 | INFO     | stage-out finished correctly
[2025-10-09 22:02:02] 2025-10-09 20:01:02,840 | INFO     | time since job start (4932s) is within the limit (172800.0s)
[2025-10-09 22:02:02] 2025-10-09 20:01:03,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 22:02:02] 2025-10-09 20:01:03,068 | INFO     | job 6837332758 has state=finished
[2025-10-09 22:02:02] 2025-10-09 20:01:03,068 | INFO     | preparing for final server update for job 6837332758 in state='finished'
[2025-10-09 22:02:02] 2025-10-09 20:01:03,068 | INFO     | this job has now completed (state=finished)
[2025-10-09 22:02:02] 2025-10-09 20:01:03,068 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 22:02:02] 2025-10-09 20:01:03,068 | INFO     | log transfer has been attempted: DONE
[2025-10-09 22:02:02] 2025-10-09 20:01:03,068 | INFO     | job 6837332758 has finished - writing final server update
[2025-10-09 22:02:02] 2025-10-09 20:01:03,068 | INFO     | total number of processed events: 400 (read)
[2025-10-09 22:02:02] 2025-10-09 20:01:03,069 | INFO     | executing command: lscpu
[2025-10-09 22:02:02] 2025-10-09 20:01:03,082 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 22:02:02] 2025-10-09 20:01:04,845 | INFO     | time since job start (4934s) is within the limit (172800.0s)
[2025-10-09 22:02:02] 2025-10-09 20:01:05,254 | WARNING  | process 1727577 can no longer be monitored (due to stat problems) - aborting
[2025-10-09 22:02:02] 2025-10-09 20:01:05,254 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837332758/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 22:02:02] 2025-10-09 20:01:05,324 | INFO     | number of running child processes to parent process 1727577: 1
[2025-10-09 22:02:02] 2025-10-09 20:01:05,325 | INFO     | maximum number of monitored processes: 6
[2025-10-09 22:02:02] 2025-10-09 20:01:05,929 | INFO     | PID=1721138 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 22:02:02] 2025-10-09 20:01:06,929 | INFO     | time since job start (4936s) is within the limit (172800.0s)
[2025-10-09 22:02:02] 2025-10-09 20:01:07,625 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 22:02:02] 2025-10-09 20:01:07,626 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3656.5155833333333
[2025-10-09 22:02:02] 2025-10-09 20:01:07,627 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837332758/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 22:02:02] 2025-10-09 20:01:07,627 | INFO     | extracted standard info from prmon json
[2025-10-09 22:02:02] 2025-10-09 20:01:07,627 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 22:02:02] 2025-10-09 20:01:07,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 22:02:02] 2025-10-09 20:01:07,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 22:02:02] 2025-10-09 20:01:07,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 22:02:02] 2025-10-09 20:01:07,628 | INFO     | fitting pss+swap vs Time
[2025-10-09 22:02:02] 2025-10-09 20:01:07,628 | INFO     | sum of square deviations: 125630262.5
[2025-10-09 22:02:02] 2025-10-09 20:01:07,628 | INFO     | sum of deviations: -16214643050.499998
[2025-10-09 22:02:02] 2025-10-09 20:01:07,628 | INFO     | mean x: 1760037680.5
[2025-10-09 22:02:02] 2025-10-09 20:01:07,628 | INFO     | mean y: 2513393.364864865
[2025-10-09 22:02:02] 2025-10-09 20:01:07,628 | INFO     | -- intersect: 227164203394.1118
[2025-10-09 22:02:02] 2025-10-09 20:01:07,628 | INFO     | intersect: 227164203394.1118
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | chi2: 0.14350977501736936
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | -- intersect: 227164203394.1118
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | current memory leak: -129.07 B/s (using 74 data points, chi2=0.14)
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | could have reported an average CPU frequency of 3838 MHz (6 samples)
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | ..............................
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | . Timing measurements:
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | . get job = 0 s
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | . initial setup = 1 s
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | . payload setup = 2 s
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | . stage-in = 0 s
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | . payload execution = 4911 s
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | . stage-out = 0 s
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | . log creation = 0 s
[2025-10-09 22:02:02] 2025-10-09 20:01:07,629 | INFO     | ..............................
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | 
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | job summary report
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | --------------------------------------------------
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | PanDA job id: 6837332758
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | task id: 46676269
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | errors: (none)
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | pilot state: finished 
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | transexitcode: 0
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | exeerrorcode: 0
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | exeerrordiag: 
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | exitcode: 0
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | exitmsg: OK
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | cpuconsumptiontime: 14188 s
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | nevents: 400
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | neventsw: 0
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | pid: 1727577
[2025-10-09 22:02:02] 2025-10-09 20:01:07,906 | INFO     | pgrp: 1727577
[2025-10-09 22:02:02] 2025-10-09 20:01:07,907 | INFO     | corecount: 3
[2025-10-09 22:02:02] 2025-10-09 20:01:07,907 | INFO     | event service: False
[2025-10-09 22:02:02] 2025-10-09 20:01:07,907 | INFO     | sizes: {0: 2348856, 3: 2349118, 11: 2349146, 4917: 2375559, 4919: 2384563, 4920: 2384619, 4924: 2384941}
[2025-10-09 22:02:02] 2025-10-09 20:01:07,907 | INFO     | --------------------------------------------------
[2025-10-09 22:02:02] 2025-10-09 20:01:07,907 | INFO     | 
[2025-10-09 22:02:02] 2025-10-09 20:01:07,907 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-09 22:02:02] 2025-10-09 20:01:07,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,923 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | job 6837332758 has completed (purged errors)
[2025-10-09 22:02:02] 2025-10-09 20:01:07,924 | INFO     | overall cleanup function is called
[2025-10-09 22:02:02] 2025-10-09 20:01:08,931 | INFO     | --- collectZombieJob: --- 10, [1727577]
[2025-10-09 22:02:02] 2025-10-09 20:01:08,931 | INFO     | zombie collector waiting for pid 1727577
[2025-10-09 22:02:02] 2025-10-09 20:01:08,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 22:02:02] 2025-10-09 20:01:08,931 | INFO     | collected zombie processes
[2025-10-09 22:02:02] 2025-10-09 20:01:08,931 | INFO     | will attempt to kill all subprocesses of pid=1727577
[2025-10-09 22:02:02] 2025-10-09 20:01:08,995 | INFO     | process IDs to be killed: [1727577] (in reverse order)
[2025-10-09 22:02:02] 2025-10-09 20:01:09,025 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 22:02:02] 2025-10-09 20:01:09,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 22:02:02] 2025-10-09 20:01:09,028 | INFO     | did not find any defunct processes belonging to 1727577
[2025-10-09 22:02:02] 2025-10-09 20:01:09,029 | INFO     | did not find any defunct processes belonging to 1727577
[2025-10-09 22:02:02] 2025-10-09 20:01:09,029 | INFO     | ready for new job
[2025-10-09 22:02:02] 2025-10-09 20:01:09,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 22:02:02] 2025-10-09 20:01:09,030 | INFO     | ***************************************
[2025-10-09 22:02:02] 2025-10-09 20:01:09,030 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 22:02:02] 2025-10-09 20:01:09,030 | INFO     | ***************************************
[2025-10-09 22:02:02] 2025-10-09 20:01:09,030 | INFO     | 
[2025-10-09 22:02:02] 2025-10-09 20:01:09,031 | INFO     | architecture information:
[2025-10-09 22:02:02] 2025-10-09 20:01:09,031 | INFO     | executing command: cat /etc/os-release
[2025-10-09 22:02:02] 2025-10-09 20:01:09,040 | INFO     | cat /etc/os-release:
[2025-10-09 22:02:02] NAME="CentOS Linux"
[2025-10-09 22:02:02] VERSION="7 (Core)"
[2025-10-09 22:02:02] ID="centos"
[2025-10-09 22:02:02] ID_LIKE="rhel fedora"
[2025-10-09 22:02:02] VERSION_ID="7"
[2025-10-09 22:02:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 22:02:02] ANSI_COLOR="0;31"
[2025-10-09 22:02:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 22:02:02] HOME_URL="https://www.centos.org/"
[2025-10-09 22:02:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 22:02:02] 
[2025-10-09 22:02:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 22:02:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 22:02:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 22:02:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 22:02:02] 
[2025-10-09 22:02:02] 2025-10-09 20:01:09,040 | INFO     | ***************************************
[2025-10-09 22:02:02] 2025-10-09 20:01:09,543 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-09 22:02:02] 2025-10-09 20:01:09,555 | INFO     | sufficient remaining disk space (256726007808 B)
[2025-10-09 22:02:02] 2025-10-09 20:01:09,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 22:02:02] 2025-10-09 20:01:09,556 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 22:02:02] 2025-10-09 20:01:09,556 | INFO     | update_server=False
[2025-10-09 22:02:02] 2025-10-09 20:01:09,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 22:02:02] 2025-10-09 20:01:09,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 22:02:02] 2025-10-09 20:01:09,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 22:02:02] 2025-10-09 20:01:09,556 | INFO     | aborting loop
[2025-10-09 22:02:02] 2025-10-09 20:01:09,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 22:02:02] 2025-10-09 20:01:09,691 | INFO     | all data control threads have been joined
[2025-10-09 22:02:02] 2025-10-09 20:01:09,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 22:02:02] 2025-10-09 20:01:09,999 | INFO     | all payload control threads have been joined
[2025-10-09 22:02:02] 2025-10-09 20:01:10,561 | INFO     | [job] retrieve thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:10,562 | INFO     | [job] job monitor thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:10,562 | INFO     | [job] queue monitor thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:10,697 | INFO     | [data] control thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:10,704 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:10,878 | INFO     | all job control threads have been joined
[2025-10-09 22:02:02] 2025-10-09 20:01:11,005 | INFO     | [payload] control thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:11,334 | INFO     | [payload] validate_post thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:11,415 | INFO     | [data] copytool_in thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:11,530 | INFO     | [payload] failed_post thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:11,884 | INFO     | [job] control thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:11,957 | INFO     | [job] validate thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:11,985 | INFO     | [data] copytool_out thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:12,005 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:12,063 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:13,563 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:20,322 | INFO     | job.realtimelogging is not enabled
[2025-10-09 22:02:02] 2025-10-09 20:01:21,328 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 22:02:02] 2025-10-09 20:01:40,059 | INFO     | PID=1721138 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 22:02:02] 2025-10-09 20:01:40,060 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 22:02:02] 2025-10-09 20:01:40,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 22:02:02] 2025-10-09 20:01:40,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 22:02:02] 2025-10-09 20:01:55,795 | INFO     | [monitor] cgroup control has ended
[2025-10-09 22:02:02] 2025-10-09 20:01:57,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811194558272)>', '<ExcThread(monitor, started 139810110961408)>']
[2025-10-09 22:02:02] 2025-10-09 20:01:58,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 22:02:02] 2025-10-09 20:01:58,154 | INFO     | [monitor] control thread has ended
[2025-10-09 22:02:02] 2025-10-09 20:02:02,736 | INFO     | all workflow threads have been joined
[2025-10-09 22:02:02] 2025-10-09 20:02:02,736 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 22:02:02] 2025-10-09 20:02:02,737 | INFO     | traces error code: 0
[2025-10-09 22:02:02] 2025-10-09 20:02:02,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 22:02:02] 2025-10-09 20:02:02,790 [wrapper] ==== pilot stdout END ====
[2025-10-09 22:02:02] 2025-10-09 20:02:02,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 22:02:02] 2025-10-09 20:02:02,794 [wrapper] pilotpid: 1721138
[2025-10-09 22:02:02] 2025-10-09 20:02:02,797 [wrapper] Pilot exit status: 0
[2025-10-09 22:02:02] 2025-10-09 20:02:02,804 [wrapper] pandaids: 6837332758
[2025-10-09 22:02:02] 2025-10-09 20:02:02,824 [wrapper] cleanup supervisor_pilot 1741132 1721139
[2025-10-09 22:02:02] 2025-10-09 20:02:02,827 [wrapper] Test setup, not cleaning
[2025-10-09 22:02:02] 2025-10-09 20:02:02,829 [wrapper] apfmon messages muted
[2025-10-09 22:02:02] 2025-10-09 20:02:02,831 [wrapper] ==== wrapper stdout END ====
[2025-10-09 22:02:02] 2025-10-09 20:02:02,834 [wrapper] ==== wrapper stderr END ====
[2025-10-09 22:02:02]  *** Error codes and diagnostics ***
[2025-10-09 22:02:02]     "exeErrorCode": 0,
[2025-10-09 22:02:02]     "exeErrorDiag": "",
[2025-10-09 22:02:02]     "pilotErrorCode": 0,
[2025-10-09 22:02:02]     "pilotErrorDiag": "",
[2025-10-09 22:02:02]  *** Listing of results directory ***
[2025-10-09 22:02:02] total 409804
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc    557409 Oct  9 13:10 pilot3.tar.gz
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc      5112 Oct  9 13:16 queuedata.json
[2025-10-09 22:02:02] -rwx------ 1 boinc boinc     36292 Oct  9 13:17 runpilot2-wrapper.sh
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc       100 Oct  9 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 22:02:02] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 20:38 run_atlas
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc       105 Oct  9 20:38 job.xml
[2025-10-09 22:02:02] -rw-r--r-- 2 boinc boinc 221397739 Oct  9 20:38 EVNT.46676267._000633.pool.root.1
[2025-10-09 22:02:02] -rw-r--r-- 2 boinc boinc    569677 Oct  9 20:38 input.tar.gz
[2025-10-09 22:02:02] -rw-r--r-- 2 boinc boinc     15120 Oct  9 20:38 start_atlas.sh
[2025-10-09 22:02:02] drwxrwx--x 2 boinc boinc      4096 Oct  9 20:38 shared
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc         0 Oct  9 20:38 boinc_setup_complete
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc      6515 Oct  9 20:38 init_data.xml
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc         0 Oct  9 20:38 boinc_lockfile
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc      2548 Oct  9 20:38 pandaJob.out
[2025-10-09 22:02:02] -rw------- 1 boinc boinc    975446 Oct  9 20:38 agis_schedconf.cvmfs.json
[2025-10-09 22:02:02] -rw------- 1 boinc boinc   1560401 Oct  9 20:38 agis_ddmendpoints.agis.ALL.json
[2025-10-09 22:02:02] drwx------ 5 boinc boinc      4096 Oct  9 20:38 pilot3
[2025-10-09 22:02:02] -rw------- 1 boinc boinc 192405811 Oct  9 22:00 HITS.46676269._015380.pool.root.1
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc       529 Oct  9 22:00 boinc_task_state.xml
[2025-10-09 22:02:02] -rw------- 1 boinc boinc      1017 Oct  9 22:00 memory_monitor_summary.json
[2025-10-09 22:02:02] -rw------- 1 boinc boinc    243002 Oct  9 22:01 log.46676269._015380.job.log.tgz.1
[2025-10-09 22:02:02] -rw------- 1 boinc boinc      7769 Oct  9 22:01 heartbeat.json
[2025-10-09 22:02:02] -rw------- 1 boinc boinc        95 Oct  9 22:01 pilot_heartbeat.json
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc      8192 Oct  9 22:01 boinc_mmap_file
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc        27 Oct  9 22:01 wrapper_checkpoint.txt
[2025-10-09 22:02:02] -rw------- 1 boinc boinc      4824 Oct  9 22:02 pilotlog.txt
[2025-10-09 22:02:02] -rw------- 1 boinc boinc    723937 Oct  9 22:02 log.46676269._015380.job.log.1
[2025-10-09 22:02:02] -rw------- 1 boinc boinc       357 Oct  9 22:02 output.list
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc       620 Oct  9 22:02 runtime_log
[2025-10-09 22:02:02] -rw------- 1 boinc boinc    983040 Oct  9 22:02 result.tar.gz
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc      8792 Oct  9 22:02 runtime_log.err
[2025-10-09 22:02:02] -rw------- 1 boinc boinc       661 Oct  9 22:02 6VCNDmLp3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbUZNDmpdN2dm.diag
[2025-10-09 22:02:02] -rw-r--r-- 1 boinc boinc     21873 Oct  9 22:02 stderr.txt
[2025-10-09 22:02:02] HITS file was successfully produced:
[2025-10-09 22:02:02] -rw------- 1 boinc boinc 192405811 Oct  9 22:00 shared/HITS.pool.root.1
[2025-10-09 22:02:02]  *** Contents of shared directory: ***
[2025-10-09 22:02:02] total 405656
[2025-10-09 22:02:02] -rw-r--r-- 2 boinc boinc 221397739 Oct  9 20:38 ATLAS.root_0
[2025-10-09 22:02:02] -rw-r--r-- 2 boinc boinc    569677 Oct  9 20:38 input.tar.gz
[2025-10-09 22:02:02] -rw-r--r-- 2 boinc boinc     15120 Oct  9 20:38 start_atlas.sh
[2025-10-09 22:02:02] -rw------- 1 boinc boinc 192405811 Oct  9 22:00 HITS.pool.root.1
[2025-10-09 22:02:02] -rw------- 1 boinc boinc    983040 Oct  9 22:02 result.tar.gz
22:02:04 (1717422): run_atlas exited; CPU time 14214.812590
22:02:04 (1717422): called boinc_finish(0)

</stderr_txt>
]]>

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