Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:47:45 (3437920): wrapper (7.7.26015): starting
09:47:45 (3437920): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 09:47:45] Arguments: --nthreads 12
[2025-10-09 09:47:45] Threads: 12
[2025-10-09 09:47:45] Checking for CVMFS
[2025-10-09 09:47:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 09:47:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 09:47:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 09:47:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 09:47:46] 2.11.5.0 2461 27066 149528 151513 3 728 42731503 45568001 17637 130560 0 260953954 99.852 118007661 11982 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 09:47:46] CVMFS is ok
[2025-10-09 09:47:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 09:47:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 09:47:46] Further information can be found at the LHC@home message board.
[2025-10-09 09:47:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 09:47:46] Checking for apptainer binary...
[2025-10-09 09:47:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 09:47:46] Running /usr/bin/apptainer --version
[2025-10-09 09:47:46] apptainer version 1.4.1-1.el9
[2025-10-09 09:47:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 09:47:47] wns0083.triumf.lcg
[2025-10-09 09:47:47] apptainer works
[2025-10-09 09:47:47] Set ATHENA_PROC_NUMBER=12
[2025-10-09 09:47:47] Set ATHENA_CORE_NUMBER=12
[2025-10-09 09:47:47] Starting ATLAS job with PandaID=6837349234
[2025-10-09 09:47:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 09:52:21]  *** The last 200 lines of the pilot log: ***
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | WARNING  | wrong length of table data, x=[1760028551.0], y=[1034.0] (must be same and length>=4)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | INFO     | could have reported an average CPU frequency of 2641 MHz (4 samples)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | INFO     | ..............................
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . Timing measurements:
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . get job = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . initial setup = 4 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . payload setup = 12 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . stage-in = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . payload execution = 35 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . stage-out = 1 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . log creation = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | ..............................
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837349234/pilotlog.txt
[2025-10-09 09:52:21] 2025-10-09 16:51:46,882 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 09:52:21] - Log from pilotlog.txt -
[2025-10-09 09:52:21] 2025-10-09 16:51:46,867 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837349234/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,868 | INFO     | extracted standard info from prmon json
[2025-10-09 09:52:21] 2025-10-09 16:51:46,868 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 09:52:21] 2025-10-09 16:51:46,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | WARNING  | wrong length of table data, x=[1760028551.0], y=[1034.0] (must be same and length>=4)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | INFO     | could have reported an average CPU frequency of 2641 MHz (4 samples)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | INFO     | ..............................
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . Timing measurements:
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . get job = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . initial setup = 4 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . payload setup = 12 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . stage-in = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . payload execution = 35 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . stage-out = 1 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . log creation = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | ..............................
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837349234/pilotlog.txt
[2025-10-09 09:52:21] 2025-10-09 16:51:46,883 | WARNING  | 
[2025-10-09 09:52:21] [begin log extracts]
[2025-10-09 09:52:21] - Log from pilotlog.txt -
[2025-10-09 09:52:21] 2025-10-09 16:51:46,867 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837349234/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,868 | INFO     | extracted standard info from prmon json
[2025-10-09 09:52:21] 2025-10-09 16:51:46,868 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 09:52:21] 2025-10-09 16:51:46,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | WARNING  | wrong length of table data, x=[1760028551.0], y=[1034.0] (must be same and length>=4)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | INFO     | could have reported an average CPU frequency of 2641 MHz (4 samples)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,869 | INFO     | ..............................
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . Timing measurements:
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . get job = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . initial setup = 4 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . payload setup = 12 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . stage-in = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . payload execution = 35 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . stage-out = 1 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | . log creation = 0 s
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | ..............................
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 09:52:21] 2025-10-09 16:51:46,870 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837349234/pilotlog.txt
[2025-10-09 09:52:21] [end log extracts]
[2025-10-09 09:52:21] 2025-10-09 16:51:46,883 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 09:52:21] 2025-10-09 16:51:46,884 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 09:52:21] 2025-10-09 16:51:47,092 | INFO     | time since job start (216s) is within the limit (172800.0s)
[2025-10-09 09:52:21] 2025-10-09 16:51:47,213 | INFO     | 
[2025-10-09 09:52:21] 2025-10-09 16:51:47,213 | INFO     | job summary report
[2025-10-09 09:52:21] 2025-10-09 16:51:47,213 | INFO     | --------------------------------------------------
[2025-10-09 09:52:21] 2025-10-09 16:51:47,213 | INFO     | PanDA job id: 6837349234
[2025-10-09 09:52:21] 2025-10-09 16:51:47,213 | INFO     | task id: 46676269
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 09:49:25,526 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | pilot state: failed 
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | transexitcode: 65
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | exeerrorcode: 65
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | exitcode: 65
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | cpuconsumptiontime: 17 s
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | nevents: 0
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | neventsw: 0
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | pid: 3448975
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | pgrp: 3448975
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | corecount: 12
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | event service: False
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | sizes: {0: 2348681, 1: 2348880, 12: 2349170, 23: 2349170, 52: 2372447, 55: 2376739, 58: 2376895, 182: 2377061}
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | --------------------------------------------------
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | 
[2025-10-09 09:52:21] 2025-10-09 16:51:47,214 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | job 6837349234 has completed (purged errors)
[2025-10-09 09:52:21] 2025-10-09 16:51:47,235 | INFO     | overall cleanup function is called
[2025-10-09 09:52:21] 2025-10-09 16:51:48,242 | INFO     | --- collectZombieJob: --- 10, [3448975]
[2025-10-09 09:52:21] 2025-10-09 16:51:48,242 | INFO     | zombie collector waiting for pid 3448975
[2025-10-09 09:52:21] 2025-10-09 16:51:48,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 09:52:21] 2025-10-09 16:51:48,242 | INFO     | collected zombie processes
[2025-10-09 09:52:21] 2025-10-09 16:51:48,243 | INFO     | will attempt to kill all subprocesses of pid=3448975
[2025-10-09 09:52:21] 2025-10-09 16:51:48,697 | INFO     | process IDs to be killed: [3448975] (in reverse order)
[2025-10-09 09:52:21] 2025-10-09 16:51:48,765 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 09:52:21] 2025-10-09 16:51:48,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 09:52:21] 2025-10-09 16:51:48,773 | INFO     | did not find any defunct processes belonging to 3448975
[2025-10-09 09:52:21] 2025-10-09 16:51:48,782 | INFO     | did not find any defunct processes belonging to 3448975
[2025-10-09 09:52:21] 2025-10-09 16:51:48,782 | INFO     | ready for new job
[2025-10-09 09:52:21] 2025-10-09 16:51:48,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 09:52:21] 2025-10-09 16:51:48,784 | INFO     | ***************************************
[2025-10-09 09:52:21] 2025-10-09 16:51:48,784 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 09:52:21] 2025-10-09 16:51:48,784 | INFO     | ***************************************
[2025-10-09 09:52:21] 2025-10-09 16:51:48,784 | INFO     | 
[2025-10-09 09:52:21] 2025-10-09 16:51:48,786 | INFO     | architecture information:
[2025-10-09 09:52:21] 2025-10-09 16:51:48,786 | INFO     | executing command: cat /etc/os-release
[2025-10-09 09:52:21] 2025-10-09 16:51:48,799 | INFO     | cat /etc/os-release:
[2025-10-09 09:52:21] NAME="CentOS Linux"
[2025-10-09 09:52:21] VERSION="7 (Core)"
[2025-10-09 09:52:21] ID="centos"
[2025-10-09 09:52:21] ID_LIKE="rhel fedora"
[2025-10-09 09:52:21] VERSION_ID="7"
[2025-10-09 09:52:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 09:52:21] ANSI_COLOR="0;31"
[2025-10-09 09:52:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 09:52:21] HOME_URL="https://www.centos.org/"
[2025-10-09 09:52:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 09:52:21] 
[2025-10-09 09:52:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 09:52:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 09:52:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 09:52:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 09:52:21] 
[2025-10-09 09:52:21] 2025-10-09 16:51:48,799 | INFO     | ***************************************
[2025-10-09 09:52:21] 2025-10-09 16:51:49,302 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 09:52:21] 2025-10-09 16:51:49,335 | INFO     | sufficient remaining disk space (1881127518208 B)
[2025-10-09 09:52:21] 2025-10-09 16:51:49,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 09:52:21] 2025-10-09 16:51:49,336 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 09:52:21] 2025-10-09 16:51:49,336 | INFO     | update_server=False
[2025-10-09 09:52:21] 2025-10-09 16:51:49,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 09:52:21] 2025-10-09 16:51:49,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 09:52:21] 2025-10-09 16:51:49,336 | INFO     | aborting loop
[2025-10-09 09:52:21] 2025-10-09 16:51:49,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 09:52:21] 2025-10-09 16:51:49,422 | INFO     | all data control threads have been joined
[2025-10-09 09:52:21] 2025-10-09 16:51:49,675 | INFO     | all payload control threads have been joined
[2025-10-09 09:52:21] 2025-10-09 16:51:49,925 | INFO     | all job control threads have been joined
[2025-10-09 09:52:21] 2025-10-09 16:51:50,358 | INFO     | [job] retrieve thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:50,359 | INFO     | [job] job monitor thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:50,428 | INFO     | [data] control thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:50,681 | INFO     | [payload] control thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:50,798 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:50,931 | INFO     | [job] control thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,032 | INFO     | [job] validate thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,048 | INFO     | [data] copytool_in thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 09:52:21] 2025-10-09 16:51:51,283 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,343 | INFO     | [data] copytool_out thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,635 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,735 | INFO     | [payload] validate_post thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,759 | INFO     | [payload] failed_post thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,826 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:51,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 09:52:21] 2025-10-09 16:51:52,962 | INFO     | [job] queue monitor thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:51:55,244 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 09:52:21] 2025-10-09 16:52:10,762 | INFO     | [monitor] cgroup control has ended
[2025-10-09 09:52:21] 2025-10-09 16:52:11,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768307611456)>', '<ExcThread(monitor, started 139767987541760)>']
[2025-10-09 09:52:21] 2025-10-09 16:52:17,000 | INFO     | all workflow threads have been joined
[2025-10-09 09:52:21] 2025-10-09 16:52:17,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 09:52:21] 2025-10-09 16:52:17,001 | INFO     | traces error code: 0
[2025-10-09 09:52:21] 2025-10-09 16:52:17,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 09:52:21] 2025-10-09 16:52:20,492 | INFO     | PID=3442309 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 09:52:21] 2025-10-09 16:52:20,493 | INFO     | .. there are 28 such processes running
[2025-10-09 09:52:21] 2025-10-09 16:52:20,494 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 09:52:21] 2025-10-09 16:52:20,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 09:52:21] 2025-10-09 16:52:20,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 09:52:21] 2025-10-09 16:52:20,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 09:52:21] 2025-10-09 16:52:20,494 | CRITICAL | thread 'MainThread' is not alive
[2025-10-09 09:52:21] 2025-10-09 16:52:20,494 | INFO     | [monitor] control thread has ended
[2025-10-09 09:52:21] 2025-10-09 16:52:20,711 [wrapper] ==== pilot stdout END ====
[2025-10-09 09:52:21] 2025-10-09 16:52:20,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 09:52:21] 2025-10-09 16:52:20,715 [wrapper] pilotpid: 3442309
[2025-10-09 09:52:21] 2025-10-09 16:52:20,717 [wrapper] Pilot exit status: 0
[2025-10-09 09:52:21] 2025-10-09 16:52:20,727 [wrapper] pandaids: 6837349234
[2025-10-09 09:52:21] 2025-10-09 16:52:20,770 [wrapper] cleanup supervisor_pilot 3442315 3442310
[2025-10-09 09:52:21] 2025-10-09 16:52:20,772 [wrapper] Test setup, not cleaning
[2025-10-09 09:52:21] 2025-10-09 16:52:20,774 [wrapper] apfmon messages muted
[2025-10-09 09:52:21] 2025-10-09 16:52:20,776 [wrapper] ==== wrapper stdout END ====
[2025-10-09 09:52:21] 2025-10-09 16:52:20,778 [wrapper] ==== wrapper stderr END ====
[2025-10-09 09:52:21]  *** Error codes and diagnostics ***
[2025-10-09 09:52:21]     "exeErrorCode": 65,
[2025-10-09 09:52:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 09:52:21]     "pilotErrorCode": 1305,
[2025-10-09 09:52:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 09:52:21]  *** Listing of results directory ***
[2025-10-09 09:52:21] total 217812
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc    557409 Oct  9 07:53 pilot3.tar.gz
[2025-10-09 09:52:21] -rwx------. 1 boinc boinc     36292 Oct  9 07:59 runpilot2-wrapper.sh
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc      5112 Oct  9 07:59 queuedata.json
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc       100 Oct  9 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 09:52:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 09:47 run_atlas
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc       105 Oct  9 09:47 job.xml
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc      6594 Oct  9 09:47 init_data.xml
[2025-10-09 09:52:21] -rw-r--r--. 2 boinc boinc 218918803 Oct  9 09:47 EVNT.46676267._000866.pool.root.1
[2025-10-09 09:52:21] -rw-r--r--. 2 boinc boinc     15120 Oct  9 09:47 start_atlas.sh
[2025-10-09 09:52:21] drwxrwx--x. 2 boinc boinc      4096 Oct  9 09:47 shared
[2025-10-09 09:52:21] -rw-r--r--. 2 boinc boinc    569678 Oct  9 09:47 input.tar.gz
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc         0 Oct  9 09:47 boinc_lockfile
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc      2549 Oct  9 09:47 pandaJob.out
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc    975462 Oct  9 09:48 agis_schedconf.cvmfs.json
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc   1560401 Oct  9 09:48 agis_ddmendpoints.agis.ALL.json
[2025-10-09 09:52:21] drwx------. 5 boinc boinc      4096 Oct  9 09:48 pilot3
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc       523 Oct  9 09:49 boinc_task_state.xml
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc       960 Oct  9 09:49 memory_monitor_summary.json
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc     22300 Oct  9 09:49 log.46676269._020751.job.log.tgz.1
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc      8382 Oct  9 09:51 heartbeat.json
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc        22 Oct  9 09:52 wrapper_checkpoint.txt
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc      8192 Oct  9 09:52 boinc_mmap_file
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc        95 Oct  9 09:52 pilot_heartbeat.json
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc       893 Oct  9 09:52 pilotlog.txt
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc     88996 Oct  9 09:52 log.46676269._020751.job.log.1
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc       188 Oct  9 09:52 output.list
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc       620 Oct  9 09:52 runtime_log
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc    133120 Oct  9 09:52 result.tar.gz
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc      8528 Oct  9 09:52 runtime_log.err
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc       644 Oct  9 09:52 KwGNDmgI7Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDm28NMDmR53wvn.diag
[2025-10-09 09:52:21] -rw-r--r--. 1 boinc boinc     21802 Oct  9 09:52 stderr.txt
[2025-10-09 09:52:21] No HITS result produced
[2025-10-09 09:52:21]  *** Contents of shared directory: ***
[2025-10-09 09:52:21] total 214500
[2025-10-09 09:52:21] -rw-r--r--. 2 boinc boinc 218918803 Oct  9 09:47 ATLAS.root_0
[2025-10-09 09:52:21] -rw-r--r--. 2 boinc boinc     15120 Oct  9 09:47 start_atlas.sh
[2025-10-09 09:52:21] -rw-r--r--. 2 boinc boinc    569678 Oct  9 09:47 input.tar.gz
[2025-10-09 09:52:21] -rw-------. 1 boinc boinc    133120 Oct  9 09:52 result.tar.gz
09:52:23 (3437920): run_atlas exited; CPU time 25.570031
09:52:23 (3437920): called boinc_finish(0)

</stderr_txt>
]]>

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