Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:19:36 (2180041): wrapper (7.7.26015): starting
00:19:36 (2180041): wrapper: running run_atlas (--nthreads 3)
[2025-10-10 00:19:36] Arguments: --nthreads 3
[2025-10-10 00:19:36] Threads: 3
[2025-10-10 00:19:36] Checking for CVMFS
[2025-10-10 00:19:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:19:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:19:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:19:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:19:36] 2.9.2.0 2010327 581 63824 151526 3 56 2541306 36864000 0 130560 0 448282 99.992 16113 845 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 00:19:36] CVMFS is ok
[2025-10-10 00:19:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:19:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:19:36] Further information can be found at the LHC@home message board.
[2025-10-10 00:19:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:19:36] Checking for apptainer binary...
[2025-10-10 00:19:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:19:36] Running /usr/bin/apptainer --version
[2025-10-10 00:19:36] apptainer version 1.4.1-1.1
[2025-10-10 00:19:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:19:36] atlasA115
[2025-10-10 00:19:36] apptainer works
[2025-10-10 00:19:36] Set ATHENA_PROC_NUMBER=3
[2025-10-10 00:19:36] Set ATHENA_CORE_NUMBER=3
[2025-10-10 00:19:36] Starting ATLAS job with PandaID=6837336551
[2025-10-10 00:19:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 01:43:54]  *** The last 200 lines of the pilot log: ***
[2025-10-10 01:43:54]  protocol_id=None
[2025-10-10 01:43:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 01:43:54]  replicas=None
[2025-10-10 01:43:54]  scope=mc23_13p6TeV
[2025-10-10 01:43:54]  status=None
[2025-10-10 01:43:54]  status_code=0
[2025-10-10 01:43:54]  storage_token=
[2025-10-10 01:43:54]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6837336551/log.46676269._016367.job.log.tgz.1
[2025-10-10 01:43:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/67/log.46676269._016367.job.log.tgz.1
[2025-10-10 01:43:54]  workdir=None
[2025-10-10 01:43:54] ]
[2025-10-10 01:43:54] 2025-10-09 23:42:48,963 | INFO     | transferring file log.46676269._016367.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6837336551/log.46676269._016367.job.log.tgz.1 to /local/data/boinc/
[2025-10-10 01:43:54] 2025-10-09 23:42:48,963 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6837336551/log.46676269._016367.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0163
[2025-10-10 01:43:54] 2025-10-09 23:42:48,969 | INFO     | time since job start (4986s) is within the limit (172800.0s)
[2025-10-10 01:43:54] 2025-10-09 23:42:48,976 | INFO     | adding to output.list: log.46676269._016367.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/67/log.46676269._016367.job.log.tg
[2025-10-10 01:43:54] 2025-10-09 23:42:48,977 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 01:43:54] 2025-10-09 23:42:48,977 | INFO     | summary of transferred files:
[2025-10-10 01:43:54] 2025-10-09 23:42:48,977 | INFO     |  -- lfn=log.46676269._016367.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 01:43:54] 2025-10-09 23:42:48,977 | INFO     | stage-out finished correctly
[2025-10-10 01:43:54] 2025-10-09 23:42:49,007 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 01:43:54] 2025-10-09 23:42:49,871 | INFO     | monitor loop #384: job 0:6837336551 is in state 'finished'
[2025-10-10 01:43:54] 2025-10-09 23:42:49,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 01:43:54] 2025-10-09 23:42:50,890 | INFO     | job 6837336551 has state=finished
[2025-10-10 01:43:54] 2025-10-09 23:42:50,891 | INFO     | preparing for final server update for job 6837336551 in state='finished'
[2025-10-10 01:43:54] 2025-10-09 23:42:50,891 | INFO     | this job has now completed (state=finished)
[2025-10-10 01:43:54] 2025-10-09 23:42:50,891 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 01:43:54] 2025-10-09 23:42:50,891 | INFO     | log transfer has been attempted: DONE
[2025-10-10 01:43:54] 2025-10-09 23:42:50,891 | INFO     | job 6837336551 has finished - writing final server update
[2025-10-10 01:43:54] 2025-10-09 23:42:50,891 | INFO     | total number of processed events: 400 (read)
[2025-10-10 01:43:54] 2025-10-09 23:42:50,892 | INFO     | executing command: lscpu
[2025-10-10 01:43:54] 2025-10-09 23:42:50,908 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 01:43:54] 2025-10-09 23:42:50,975 | INFO     | time since job start (4988s) is within the limit (172800.0s)
[2025-10-10 01:43:54] 2025-10-09 23:42:52,374 | INFO     | monitor loop #385: job 0:6837336551 is in state 'finished'
[2025-10-10 01:43:54] 2025-10-09 23:42:52,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 01:43:54] 2025-10-09 23:42:52,980 | INFO     | time since job start (4990s) is within the limit (172800.0s)
[2025-10-10 01:43:54] 2025-10-09 23:42:54,877 | INFO     | monitor loop #386: job 0:6837336551 is in state 'finished'
[2025-10-10 01:43:54] 2025-10-09 23:42:54,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 01:43:54] 2025-10-09 23:42:54,902 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 01:43:54] 2025-10-09 23:42:54,903 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3639.09
[2025-10-10 01:43:54] 2025-10-09 23:42:54,904 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837336551/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 01:43:54] 2025-10-09 23:42:54,904 | INFO     | extracted standard info from prmon json
[2025-10-10 01:43:54] 2025-10-09 23:42:54,904 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 01:43:54] 2025-10-09 23:42:54,904 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 01:43:54] 2025-10-09 23:42:54,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 01:43:54] 2025-10-09 23:42:54,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | fitting pss+swap vs Time
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | sum of square deviations: 130793150.0
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | sum of deviations: -11325193449.0
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | mean x: 1760050963.0
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | mean y: 2520537.6533333333
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | -- intersect: 152402838414.19153
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | intersect: 152402838414.19153
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | chi2: 0.04418439565323851
[2025-10-10 01:43:54] 2025-10-09 23:42:54,905 | INFO     | -- intersect: 152402838414.19153
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | current memory leak: -86.59 B/s (using 75 data points, chi2=0.04)
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | could have reported an average CPU frequency of 3774 MHz (6 samples)
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | ..............................
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | . Timing measurements:
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | . get job = 0 s
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | . initial setup = 1 s
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | . payload setup = 2 s
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | . stage-in = 0 s
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | . payload execution = 4966 s
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | . stage-out = 0 s
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | . log creation = 0 s
[2025-10-10 01:43:54] 2025-10-09 23:42:54,906 | INFO     | ..............................
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | 
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | job summary report
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | --------------------------------------------------
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | PanDA job id: 6837336551
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | task id: 46676269
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | errors: (none)
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | pilot state: finished 
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | transexitcode: 0
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | exeerrorcode: 0
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | exeerrordiag: 
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | exitcode: 0
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | exitmsg: OK
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | cpuconsumptiontime: 14337 s
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | nevents: 400
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | neventsw: 0
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | pid: 2190191
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | pgrp: 2190191
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | corecount: 3
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | event service: False
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | sizes: {0: 2348858, 2: 2349120, 10: 2349148, 4972: 2375590, 4973: 2384650, 4979: 2384788}
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | --------------------------------------------------
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | 
[2025-10-10 01:43:54] 2025-10-09 23:42:54,937 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-10 01:43:54] 2025-10-09 23:42:54,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | job 6837336551 has completed (purged errors)
[2025-10-10 01:43:54] 2025-10-09 23:42:54,949 | INFO     | overall cleanup function is called
[2025-10-10 01:43:54] 2025-10-09 23:42:55,956 | INFO     | --- collectZombieJob: --- 10, [2190191]
[2025-10-10 01:43:54] 2025-10-09 23:42:55,956 | INFO     | zombie collector waiting for pid 2190191
[2025-10-10 01:43:54] 2025-10-09 23:42:55,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 01:43:54] 2025-10-09 23:42:55,956 | INFO     | collected zombie processes
[2025-10-10 01:43:54] 2025-10-09 23:42:55,956 | INFO     | will attempt to kill all subprocesses of pid=2190191
[2025-10-10 01:43:54] 2025-10-09 23:42:55,998 | INFO     | process IDs to be killed: [2190191] (in reverse order)
[2025-10-10 01:43:54] 2025-10-09 23:42:56,022 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 01:43:54] 2025-10-09 23:42:56,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 01:43:54] 2025-10-09 23:42:56,024 | INFO     | did not find any defunct processes belonging to 2190191
[2025-10-10 01:43:54] 2025-10-09 23:42:56,025 | INFO     | did not find any defunct processes belonging to 2190191
[2025-10-10 01:43:54] 2025-10-09 23:42:56,025 | INFO     | ready for new job
[2025-10-10 01:43:54] 2025-10-09 23:42:56,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 01:43:54] 2025-10-09 23:42:56,026 | INFO     | ***************************************
[2025-10-10 01:43:54] 2025-10-09 23:42:56,026 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 01:43:54] 2025-10-09 23:42:56,026 | INFO     | ***************************************
[2025-10-10 01:43:54] 2025-10-09 23:42:56,026 | INFO     | 
[2025-10-10 01:43:54] 2025-10-09 23:42:56,026 | INFO     | architecture information:
[2025-10-10 01:43:54] 2025-10-09 23:42:56,026 | INFO     | executing command: cat /etc/os-release
[2025-10-10 01:43:54] 2025-10-09 23:42:56,035 | INFO     | cat /etc/os-release:
[2025-10-10 01:43:54] NAME="CentOS Linux"
[2025-10-10 01:43:54] VERSION="7 (Core)"
[2025-10-10 01:43:54] ID="centos"
[2025-10-10 01:43:54] ID_LIKE="rhel fedora"
[2025-10-10 01:43:54] VERSION_ID="7"
[2025-10-10 01:43:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 01:43:54] ANSI_COLOR="0;31"
[2025-10-10 01:43:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 01:43:54] HOME_URL="https://www.centos.org/"
[2025-10-10 01:43:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 01:43:54] 
[2025-10-10 01:43:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 01:43:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 01:43:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 01:43:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 01:43:54] 
[2025-10-10 01:43:54] 2025-10-09 23:42:56,035 | INFO     | ***************************************
[2025-10-10 01:43:54] 2025-10-09 23:42:56,538 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 01:43:54] 2025-10-09 23:42:56,552 | INFO     | sufficient remaining disk space (357735333888 B)
[2025-10-10 01:43:54] 2025-10-09 23:42:56,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 01:43:54] 2025-10-09 23:42:56,552 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 01:43:54] 2025-10-09 23:42:56,552 | INFO     | update_server=False
[2025-10-10 01:43:54] 2025-10-09 23:42:56,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 01:43:54] 2025-10-09 23:42:56,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 01:43:54] 2025-10-09 23:42:56,552 | INFO     | aborting loop
[2025-10-10 01:43:54] 2025-10-09 23:42:56,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 01:43:54] 2025-10-09 23:42:56,979 | INFO     | all data control threads have been joined
[2025-10-10 01:43:54] 2025-10-09 23:42:57,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 01:43:54] 2025-10-09 23:42:57,552 | INFO     | all job control threads have been joined
[2025-10-10 01:43:54] 2025-10-09 23:42:57,558 | INFO     | [job] retrieve thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:57,558 | INFO     | [job] job monitor thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:57,558 | INFO     | [job] queue monitor thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:57,620 | INFO     | all payload control threads have been joined
[2025-10-10 01:43:54] 2025-10-09 23:42:57,962 | INFO     | [job] validate thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:57,985 | INFO     | [data] control thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,035 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,056 | INFO     | [payload] failed_post thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,145 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,554 | INFO     | [payload] validate_post thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,558 | INFO     | [job] control thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,615 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,625 | INFO     | [payload] control thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,892 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:58,916 | INFO     | [data] copytool_in thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:59,024 | INFO     | [data] copytool_out thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:42:59,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 01:43:54] 2025-10-09 23:43:03,551 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 01:43:54] 2025-10-09 23:43:26,092 | INFO     | PID=2183758 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 01:43:54] 2025-10-09 23:43:26,092 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 01:43:54] 2025-10-09 23:43:26,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 01:43:54] 2025-10-09 23:43:26,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 01:43:54] 2025-10-09 23:43:47,607 | INFO     | [monitor] cgroup control has ended
[2025-10-10 01:43:54] 2025-10-09 23:43:49,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358909581120)>', '<ExcThread(monitor, started 140358558136064)>']
[2025-10-10 01:43:54] 2025-10-09 23:43:50,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 01:43:54] 2025-10-09 23:43:50,212 | INFO     | [monitor] control thread has ended
[2025-10-10 01:43:54] 2025-10-09 23:43:54,516 | INFO     | all workflow threads have been joined
[2025-10-10 01:43:54] 2025-10-09 23:43:54,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 01:43:54] 2025-10-09 23:43:54,517 | INFO     | traces error code: 0
[2025-10-10 01:43:54] 2025-10-09 23:43:54,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 01:43:54] 2025-10-09 23:43:54,569 [wrapper] ==== pilot stdout END ====
[2025-10-10 01:43:54] 2025-10-09 23:43:54,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 01:43:54] 2025-10-09 23:43:54,573 [wrapper] pilotpid: 2183758
[2025-10-10 01:43:54] 2025-10-09 23:43:54,576 [wrapper] Pilot exit status: 0
[2025-10-10 01:43:54] 2025-10-09 23:43:54,583 [wrapper] pandaids: 6837336551
[2025-10-10 01:43:54] 2025-10-09 23:43:54,599 [wrapper] cleanup supervisor_pilot 2202020 2183759
[2025-10-10 01:43:54] 2025-10-09 23:43:54,601 [wrapper] Test setup, not cleaning
[2025-10-10 01:43:54] 2025-10-09 23:43:54,604 [wrapper] apfmon messages muted
[2025-10-10 01:43:54] 2025-10-09 23:43:54,606 [wrapper] ==== wrapper stdout END ====
[2025-10-10 01:43:54] 2025-10-09 23:43:54,609 [wrapper] ==== wrapper stderr END ====
[2025-10-10 01:43:54]  *** Error codes and diagnostics ***
[2025-10-10 01:43:54]     "exeErrorCode": 0,
[2025-10-10 01:43:54]     "exeErrorDiag": "",
[2025-10-10 01:43:54]     "pilotErrorCode": 0,
[2025-10-10 01:43:54]     "pilotErrorDiag": "",
[2025-10-10 01:43:54]  *** Listing of results directory ***
[2025-10-10 01:43:54] total 414524
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc    557409 Oct  9 13:26 pilot3.tar.gz
[2025-10-10 01:43:54] -rwx------ 1 boinc boinc     36292 Oct  9 13:55 runpilot2-wrapper.sh
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc      5112 Oct  9 13:55 queuedata.json
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc       100 Oct 10 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 01:43:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 00:19 run_atlas
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc       105 Oct 10 00:19 job.xml
[2025-10-10 01:43:54] -rw-r--r-- 2 boinc boinc 222640636 Oct 10 00:19 EVNT.46676267._000674.pool.root.1
[2025-10-10 01:43:54] -rw-r--r-- 2 boinc boinc    569680 Oct 10 00:19 input.tar.gz
[2025-10-10 01:43:54] -rw-r--r-- 2 boinc boinc     15120 Oct 10 00:19 start_atlas.sh
[2025-10-10 01:43:54] drwxrwx--x 2 boinc boinc      4096 Oct 10 00:19 shared
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc         0 Oct 10 00:19 boinc_setup_complete
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc      6439 Oct 10 00:19 init_data.xml
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc         0 Oct 10 00:19 boinc_lockfile
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc      2549 Oct 10 00:19 pandaJob.out
[2025-10-10 01:43:54] -rw------- 1 boinc boinc    975454 Oct 10 00:19 agis_schedconf.cvmfs.json
[2025-10-10 01:43:54] -rw------- 1 boinc boinc   1560401 Oct 10 00:19 agis_ddmendpoints.agis.ALL.json
[2025-10-10 01:43:54] drwx------ 5 boinc boinc      4096 Oct 10 00:19 pilot3
[2025-10-10 01:43:54] -rw------- 1 boinc boinc 195963092 Oct 10 01:42 HITS.46676269._016367.pool.root.1
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc       529 Oct 10 01:42 boinc_task_state.xml
[2025-10-10 01:43:54] -rw------- 1 boinc boinc      1020 Oct 10 01:42 memory_monitor_summary.json
[2025-10-10 01:43:54] -rw------- 1 boinc boinc    256112 Oct 10 01:42 log.46676269._016367.job.log.tgz.1
[2025-10-10 01:43:54] -rw------- 1 boinc boinc      7769 Oct 10 01:42 heartbeat.json
[2025-10-10 01:43:54] -rw------- 1 boinc boinc        95 Oct 10 01:43 pilot_heartbeat.json
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc        27 Oct 10 01:43 wrapper_checkpoint.txt
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc      8192 Oct 10 01:43 boinc_mmap_file
[2025-10-10 01:43:54] -rw------- 1 boinc boinc      4752 Oct 10 01:43 pilotlog.txt
[2025-10-10 01:43:54] -rw------- 1 boinc boinc    733053 Oct 10 01:43 log.46676269._016367.job.log.1
[2025-10-10 01:43:54] -rw------- 1 boinc boinc       357 Oct 10 01:43 output.list
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc       620 Oct 10 01:43 runtime_log
[2025-10-10 01:43:54] -rw------- 1 boinc boinc   1003520 Oct 10 01:43 result.tar.gz
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc      8792 Oct 10 01:43 runtime_log.err
[2025-10-10 01:43:54] -rw------- 1 boinc boinc       661 Oct 10 01:43 2TTLDmQQ4Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmugZNDmJTSnDo.diag
[2025-10-10 01:43:54] -rw-r--r-- 1 boinc boinc     21777 Oct 10 01:43 stderr.txt
[2025-10-10 01:43:54] HITS file was successfully produced:
[2025-10-10 01:43:54] -rw------- 1 boinc boinc 195963092 Oct 10 01:42 shared/HITS.pool.root.1
[2025-10-10 01:43:54]  *** Contents of shared directory: ***
[2025-10-10 01:43:54] total 410356
[2025-10-10 01:43:54] -rw-r--r-- 2 boinc boinc 222640636 Oct 10 00:19 ATLAS.root_0
[2025-10-10 01:43:54] -rw-r--r-- 2 boinc boinc    569680 Oct 10 00:19 input.tar.gz
[2025-10-10 01:43:54] -rw-r--r-- 2 boinc boinc     15120 Oct 10 00:19 start_atlas.sh
[2025-10-10 01:43:54] -rw------- 1 boinc boinc 195963092 Oct 10 01:42 HITS.pool.root.1
[2025-10-10 01:43:54] -rw------- 1 boinc boinc   1003520 Oct 10 01:43 result.tar.gz
01:43:56 (2180041): run_atlas exited; CPU time 14350.659441
01:43:56 (2180041): called boinc_finish(0)

</stderr_txt>
]]>

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