Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:40:21 (3199): wrapper (7.7.26015): starting
12:40:21 (3199): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 12:40:21] Arguments: --nthreads 8
[2025-10-09 12:40:21] Threads: 8
[2025-10-09 12:40:21] Checking for CVMFS
[2025-10-09 12:40:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 12:40:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 12:40:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 12:40:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 12:40:22] 2.11.2.0 2822 4431 70784 151513 1 188 10663636 20275201 1 130560 0 2380678 99.988 143314 36597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 12:40:22] CVMFS is ok
[2025-10-09 12:40:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 12:40:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 12:40:22] Further information can be found at the LHC@home message board.
[2025-10-09 12:40:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 12:40:22] Checking for apptainer binary...
[2025-10-09 12:40:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 12:40:22] Running /usr/bin/apptainer --version
[2025-10-09 12:40:22] apptainer version 1.3.2-1.el7
[2025-10-09 12:40:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 12:40:23] c-204-37.aglt2.org
[2025-10-09 12:40:23] apptainer works
[2025-10-09 12:40:23] Set ATHENA_PROC_NUMBER=8
[2025-10-09 12:40:23] Set ATHENA_CORE_NUMBER=8
[2025-10-09 12:40:23] Starting ATLAS job with PandaID=6826359727
[2025-10-09 12:40:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 15:09:01]  *** The last 200 lines of the pilot log: ***
[2025-10-09 15:09:01] 2025-10-09 19:07:58,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 15:09:01] 2025-10-09 19:07:58,282 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 15:09:01] 2025-10-09 19:07:58,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 15:09:01] 2025-10-09 19:07:58,285 | INFO     | fitting pss+swap vs Time
[2025-10-09 15:09:01] 2025-10-09 19:07:58,285 | INFO     | sum of square deviations: 945282840.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,286 | INFO     | sum of deviations: -2439244026.999999
[2025-10-09 15:09:01] 2025-10-09 19:07:58,286 | INFO     | mean x: 1760032464.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,286 | INFO     | mean y: 2501623.9862068966
[2025-10-09 15:09:01] 2025-10-09 19:07:58,286 | INFO     | -- intersect: 4544156770.437496
[2025-10-09 15:09:01] 2025-10-09 19:07:58,286 | INFO     | intersect: 4544156770.437496
[2025-10-09 15:09:01] 2025-10-09 19:07:58,286 | INFO     | chi2: 2.2806062047015434
[2025-10-09 15:09:01] 2025-10-09 19:07:58,287 | INFO     | sum of square deviations: 850825255.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,287 | INFO     | sum of deviations: 7064444129.500008
[2025-10-09 15:09:01] 2025-10-09 19:07:58,288 | INFO     | mean x: 1760032311.5
[2025-10-09 15:09:01] 2025-10-09 19:07:58,288 | INFO     | mean y: 2516533.9214285715
[2025-10-09 15:09:01] 2025-10-09 19:07:58,288 | INFO     | -- intersect: -14611118707.437862
[2025-10-09 15:09:01] 2025-10-09 19:07:58,288 | INFO     | intersect: -14611118707.437862
[2025-10-09 15:09:01] 2025-10-09 19:07:58,288 | INFO     | chi2: 1.5205731072327136
[2025-10-09 15:09:01] 2025-10-09 19:07:58,288 | INFO     | current chi2=1.5205731072327136 (change=33.32592430477463 %)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,289 | INFO     | sum of square deviations: 762879420.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,289 | INFO     | sum of deviations: 6775559749.999999
[2025-10-09 15:09:01] 2025-10-09 19:07:58,289 | INFO     | mean x: 1760032159.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,290 | INFO     | mean y: 2516033.111111111
[2025-10-09 15:09:01] 2025-10-09 19:07:58,290 | INFO     | -- intersect: -15629316131.43463
[2025-10-09 15:09:01] 2025-10-09 19:07:58,290 | INFO     | intersect: -15629316131.43463
[2025-10-09 15:09:01] 2025-10-09 19:07:58,290 | INFO     | chi2: 1.5219933767108078
[2025-10-09 15:09:01] 2025-10-09 19:07:58,290 | INFO     | current chi2=1.5219933767108078 (change=-0.09340356417844352 %)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,290 | INFO     | right removable region: 134
[2025-10-09 15:09:01] 2025-10-09 19:07:58,291 | INFO     | sum of square deviations: 850825255.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,291 | INFO     | sum of deviations: -22976085296.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,291 | INFO     | mean x: 1760032616.5
[2025-10-09 15:09:01] 2025-10-09 19:07:58,292 | INFO     | mean y: 2534220.7285714285
[2025-10-09 15:09:01] 2025-10-09 19:07:58,292 | INFO     | -- intersect: 47531282671.48543
[2025-10-09 15:09:01] 2025-10-09 19:07:58,292 | INFO     | intersect: 47531282671.48543
[2025-10-09 15:09:01] 2025-10-09 19:07:58,292 | INFO     | chi2: 0.9154456711977493
[2025-10-09 15:09:01] 2025-10-09 19:07:58,292 | INFO     | current chi2=0.9154456711977493 (change=59.85954658412624 %)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,292 | INFO     | sum of square deviations: 762879420.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,293 | INFO     | sum of deviations: -21388083947.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,293 | INFO     | mean x: 1760032769.0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,293 | INFO     | mean y: 2531368.8592592594
[2025-10-09 15:09:01] 2025-10-09 19:07:58,293 | INFO     | -- intersect: 49346802070.04407
[2025-10-09 15:09:01] 2025-10-09 19:07:58,294 | INFO     | intersect: 49346802070.04407
[2025-10-09 15:09:01] 2025-10-09 19:07:58,294 | INFO     | chi2: 0.9010625322879833
[2025-10-09 15:09:01] 2025-10-09 19:07:58,294 | INFO     | current chi2=0.9010625322879833 (change=1.5711624799041837 %)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,294 | INFO     | left removable region: 20
[2025-10-09 15:09:01] 2025-10-09 19:07:58,294 | INFO     | sum of square deviations: 459366752.5
[2025-10-09 15:09:01] 2025-10-09 19:07:58,295 | INFO     | sum of deviations: -2518733218.5
[2025-10-09 15:09:01] 2025-10-09 19:07:58,295 | INFO     | mean x: 1760032738.5
[2025-10-09 15:09:01] 2025-10-09 19:07:58,295 | INFO     | mean y: 2528675.798245614
[2025-10-09 15:09:01] 2025-10-09 19:07:58,295 | INFO     | -- intersect: 9652885171.956451
[2025-10-09 15:09:01] 2025-10-09 19:07:58,295 | INFO     | intersect: 9652885171.956451
[2025-10-09 15:09:01] 2025-10-09 19:07:58,296 | INFO     | chi2: 0.04766721098793966
[2025-10-09 15:09:01] 2025-10-09 19:07:58,296 | INFO     | -- intersect: 9652885171.956451
[2025-10-09 15:09:01] 2025-10-09 19:07:58,296 | INFO     | current memory leak: -5.48 B/s (using 114 data points, chi2=0.05)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,296 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | ..............................
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | . Timing measurements:
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | . get job = 0 s
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | . initial setup = 2 s
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | . payload setup = 8 s
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | . stage-in = 0 s
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | . payload execution = 8799 s
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | . stage-out = 0 s
[2025-10-09 15:09:01] 2025-10-09 19:07:58,297 | INFO     | . log creation = 0 s
[2025-10-09 15:09:01] 2025-10-09 19:07:58,298 | INFO     | ..............................
[2025-10-09 15:09:01] 2025-10-09 19:07:58,388 | INFO     | 
[2025-10-09 15:09:01] 2025-10-09 19:07:58,388 | INFO     | job summary report
[2025-10-09 15:09:01] 2025-10-09 19:07:58,388 | INFO     | --------------------------------------------------
[2025-10-09 15:09:01] 2025-10-09 19:07:58,388 | INFO     | PanDA job id: 6826359727
[2025-10-09 15:09:01] 2025-10-09 19:07:58,389 | INFO     | task id: 46373048
[2025-10-09 15:09:01] 2025-10-09 19:07:58,389 | INFO     | errors: (none)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 15:09:01] 2025-10-09 19:07:58,389 | INFO     | pilot state: finished 
[2025-10-09 15:09:01] 2025-10-09 19:07:58,389 | INFO     | transexitcode: 0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,390 | INFO     | exeerrorcode: 0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,390 | INFO     | exeerrordiag: 
[2025-10-09 15:09:01] 2025-10-09 19:07:58,390 | INFO     | exitcode: 0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,390 | INFO     | exitmsg: OK
[2025-10-09 15:09:01] 2025-10-09 19:07:58,390 | INFO     | cpuconsumptiontime: 65319 s
[2025-10-09 15:09:01] 2025-10-09 19:07:58,390 | INFO     | nevents: 400
[2025-10-09 15:09:01] 2025-10-09 19:07:58,391 | INFO     | neventsw: 0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,391 | INFO     | pid: 14354
[2025-10-09 15:09:01] 2025-10-09 19:07:58,391 | INFO     | pgrp: 14354
[2025-10-09 15:09:01] 2025-10-09 19:07:58,391 | INFO     | corecount: 8
[2025-10-09 15:09:01] 2025-10-09 19:07:58,391 | INFO     | event service: False
[2025-10-09 15:09:01] 2025-10-09 19:07:58,391 | INFO     | sizes: {0: 2348013, 1: 2348869, 7: 2349131, 12: 2349159, 8811: 2377311, 8812: 2386309, 8813: 2386493, 8820: 2386687}
[2025-10-09 15:09:01] 2025-10-09 19:07:58,392 | INFO     | --------------------------------------------------
[2025-10-09 15:09:01] 2025-10-09 19:07:58,392 | INFO     | 
[2025-10-09 15:09:01] 2025-10-09 19:07:58,392 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 15:09:01] 2025-10-09 19:07:58,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,423 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,425 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,426 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 15:09:01] 2025-10-09 19:07:58,426 | INFO     | job 6826359727 has completed (purged errors)
[2025-10-09 15:09:01] 2025-10-09 19:07:58,426 | INFO     | overall cleanup function is called
[2025-10-09 15:09:01] 2025-10-09 19:07:59,431 | INFO     | --- collectZombieJob: --- 10, [14354]
[2025-10-09 15:09:01] 2025-10-09 19:07:59,431 | INFO     | zombie collector waiting for pid 14354
[2025-10-09 15:09:01] 2025-10-09 19:07:59,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 15:09:01] 2025-10-09 19:07:59,432 | INFO     | collected zombie processes
[2025-10-09 15:09:01] 2025-10-09 19:07:59,432 | INFO     | will attempt to kill all subprocesses of pid=14354
[2025-10-09 15:09:01] 2025-10-09 19:07:59,523 | INFO     | process IDs to be killed: [14354] (in reverse order)
[2025-10-09 15:09:01] 2025-10-09 19:07:59,581 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 15:09:01] 2025-10-09 19:07:59,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 15:09:01] 2025-10-09 19:07:59,587 | INFO     | did not find any defunct processes belonging to 14354
[2025-10-09 15:09:01] 2025-10-09 19:07:59,590 | INFO     | did not find any defunct processes belonging to 14354
[2025-10-09 15:09:01] 2025-10-09 19:07:59,591 | INFO     | ready for new job
[2025-10-09 15:09:01] 2025-10-09 19:07:59,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 15:09:01] 2025-10-09 19:07:59,593 | INFO     | ***************************************
[2025-10-09 15:09:01] 2025-10-09 19:07:59,593 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 15:09:01] 2025-10-09 19:07:59,593 | INFO     | ***************************************
[2025-10-09 15:09:01] 2025-10-09 19:07:59,593 | INFO     | 
[2025-10-09 15:09:01] 2025-10-09 19:07:59,594 | INFO     | architecture information:
[2025-10-09 15:09:01] 2025-10-09 19:07:59,594 | INFO     | executing command: cat /etc/os-release
[2025-10-09 15:09:01] 2025-10-09 19:07:59,615 | INFO     | cat /etc/os-release:
[2025-10-09 15:09:01] NAME="CentOS Linux"
[2025-10-09 15:09:01] VERSION="7 (Core)"
[2025-10-09 15:09:01] ID="centos"
[2025-10-09 15:09:01] ID_LIKE="rhel fedora"
[2025-10-09 15:09:01] VERSION_ID="7"
[2025-10-09 15:09:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 15:09:01] ANSI_COLOR="0;31"
[2025-10-09 15:09:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 15:09:01] HOME_URL="https://www.centos.org/"
[2025-10-09 15:09:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 15:09:01] 
[2025-10-09 15:09:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 15:09:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 15:09:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 15:09:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 15:09:01] 
[2025-10-09 15:09:01] 2025-10-09 19:07:59,615 | INFO     | ***************************************
[2025-10-09 15:09:01] 2025-10-09 19:08:00,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 15:09:01] 2025-10-09 19:08:00,139 | INFO     | sufficient remaining disk space (18553503744 B)
[2025-10-09 15:09:01] 2025-10-09 19:08:00,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 15:09:01] 2025-10-09 19:08:00,140 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 15:09:01] 2025-10-09 19:08:00,140 | INFO     | update_server=False
[2025-10-09 15:09:01] 2025-10-09 19:08:00,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 15:09:01] 2025-10-09 19:08:00,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 15:09:01] 2025-10-09 19:08:00,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 15:09:01] 2025-10-09 19:08:00,141 | INFO     | aborting loop
[2025-10-09 15:09:01] 2025-10-09 19:08:00,206 | INFO     | all data control threads have been joined
[2025-10-09 15:09:01] 2025-10-09 19:08:00,403 | INFO     | all job control threads have been joined
[2025-10-09 15:09:01] 2025-10-09 19:08:00,662 | INFO     | all payload control threads have been joined
[2025-10-09 15:09:01] 2025-10-09 19:08:00,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 15:09:01] 2025-10-09 19:08:01,145 | INFO     | [job] retrieve thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,146 | INFO     | [job] queue monitor thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,147 | INFO     | [job] job monitor thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,174 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,211 | INFO     | [data] control thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,371 | INFO     | [payload] validate_post thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 15:09:01] 2025-10-09 19:08:01,403 | INFO     | [job] validate thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,407 | INFO     | [job] control thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,668 | INFO     | [payload] control thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:01,988 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:02,093 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:02,097 | INFO     | [data] copytool_in thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:02,192 | INFO     | [payload] failed_post thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:02,910 | INFO     | [data] copytool_out thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:05,385 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:10,399 | INFO     | job.realtimelogging is not enabled
[2025-10-09 15:09:01] 2025-10-09 19:08:11,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 15:09:01] 2025-10-09 19:08:31,182 | INFO     | PID=6940 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-09 15:09:01] 2025-10-09 19:08:31,183 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 15:09:01] 2025-10-09 19:08:31,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 15:09:01] 2025-10-09 19:08:31,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 15:09:01] 2025-10-09 19:08:55,111 | INFO     | [monitor] cgroup control has ended
[2025-10-09 15:09:01] 2025-10-09 19:08:56,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459994810176)>', '<ExcThread(monitor, started 140459053676288)>']
[2025-10-09 15:09:01] 2025-10-09 19:08:56,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 15:09:01] 2025-10-09 19:08:56,305 | INFO     | [monitor] control thread has ended
[2025-10-09 15:09:01] 2025-10-09 19:09:01,034 | INFO     | all workflow threads have been joined
[2025-10-09 15:09:01] 2025-10-09 19:09:01,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 15:09:01] 2025-10-09 19:09:01,035 | INFO     | traces error code: 0
[2025-10-09 15:09:01] 2025-10-09 19:09:01,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 15:09:01] 2025-10-09 19:09:01,139 [wrapper] ==== pilot stdout END ====
[2025-10-09 15:09:01] 2025-10-09 19:09:01,142 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 15:09:01] 2025-10-09 19:09:01,146 [wrapper] pilotpid: 6940
[2025-10-09 15:09:01] 2025-10-09 19:09:01,151 [wrapper] Pilot exit status: 0
[2025-10-09 15:09:01] 2025-10-09 19:09:01,169 [wrapper] pandaids: 6826359727
[2025-10-09 15:09:01] 2025-10-09 19:09:01,220 [wrapper] cleanup supervisor_pilot  9064 6941
[2025-10-09 15:09:01] 2025-10-09 19:09:01,225 [wrapper] Test setup, not cleaning
[2025-10-09 15:09:01] 2025-10-09 19:09:01,229 [wrapper] apfmon messages muted
[2025-10-09 15:09:01] 2025-10-09 19:09:01,233 [wrapper] ==== wrapper stdout END ====
[2025-10-09 15:09:01] 2025-10-09 19:09:01,237 [wrapper] ==== wrapper stderr END ====
[2025-10-09 15:09:01]  *** Error codes and diagnostics ***
[2025-10-09 15:09:01]     "exeErrorCode": 0,
[2025-10-09 15:09:01]     "exeErrorDiag": "",
[2025-10-09 15:09:01]     "pilotErrorCode": 0,
[2025-10-09 15:09:01]     "pilotErrorDiag": "",
[2025-10-09 15:09:01]  *** Listing of results directory ***
[2025-10-09 15:09:01] total 411684
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas    552446 Oct  1 03:35 pilot3.tar.gz
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas      5112 Oct  1 03:40 queuedata.json
[2025-10-09 15:09:01] -rwx------ 1 boincer umatlas     36292 Oct  1 03:40 runpilot2-wrapper.sh
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas       100 Oct  9 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 15:09:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 12:40 run_atlas
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas       105 Oct  9 12:40 job.xml
[2025-10-09 15:09:01] -rw-r--r-- 2 boincer umatlas 222517871 Oct  9 12:40 EVNT.46373045._002655.pool.root.1
[2025-10-09 15:09:01] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 12:40 start_atlas.sh
[2025-10-09 15:09:01] drwxrwx--x 2 boincer umatlas      4096 Oct  9 12:40 shared
[2025-10-09 15:09:01] -rw-r--r-- 2 boincer umatlas    565609 Oct  9 12:40 input.tar.gz
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas         0 Oct  9 12:40 boinc_lockfile
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas      2538 Oct  9 12:40 pandaJob.out
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas    975462 Oct  9 12:40 agis_schedconf.cvmfs.json
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas   1560401 Oct  9 12:40 agis_ddmendpoints.agis.ALL.json
[2025-10-09 15:09:01] drwx------ 4 boincer umatlas      4096 Oct  9 12:40 pilot3
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas      5909 Oct  9 15:04 init_data.xml
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas 191942059 Oct  9 15:07 HITS.46373048._079143.pool.root.1
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas       529 Oct  9 15:07 boinc_task_state.xml
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas      1049 Oct  9 15:07 memory_monitor_summary.json
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas        95 Oct  9 15:07 pilot_heartbeat.json
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas    382778 Oct  9 15:07 log.46373048._079143.job.log.tgz.1
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas      7841 Oct  9 15:07 heartbeat.json
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 15:08 boinc_mmap_file
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas        27 Oct  9 15:08 wrapper_checkpoint.txt
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas      4817 Oct  9 15:09 pilotlog.txt
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas   1226909 Oct  9 15:09 log.46373048._079143.job.log.1
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas       357 Oct  9 15:09 output.list
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas       620 Oct  9 15:09 runtime_log
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas   1628160 Oct  9 15:09 result.tar.gz
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas       660 Oct  9 15:09 tI4MDmFd6N8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMTBNDmZWjPzn.diag
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas      8703 Oct  9 15:09 runtime_log.err
[2025-10-09 15:09:01] -rw-r--r-- 1 boincer umatlas     20844 Oct  9 15:09 stderr.txt
[2025-10-09 15:09:01] HITS file was successfully produced:
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas 191942059 Oct  9 15:07 shared/HITS.pool.root.1
[2025-10-09 15:09:01]  *** Contents of shared directory: ***
[2025-10-09 15:09:01] total 406916
[2025-10-09 15:09:01] -rw-r--r-- 2 boincer umatlas 222517871 Oct  9 12:40 ATLAS.root_0
[2025-10-09 15:09:01] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 12:40 start_atlas.sh
[2025-10-09 15:09:01] -rw-r--r-- 2 boincer umatlas    565609 Oct  9 12:40 input.tar.gz
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas 191942059 Oct  9 15:07 HITS.pool.root.1
[2025-10-09 15:09:01] -rw------- 1 boincer umatlas   1628160 Oct  9 15:09 result.tar.gz
15:09:02 (3199): run_atlas exited; CPU time 65353.534820
15:09:02 (3199): called boinc_finish(0)

</stderr_txt>
]]>

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