Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:49:33 (3134407): wrapper (7.7.26015): starting
21:49:33 (3134407): wrapper: running run_atlas (--nthreads 6)
[2025-10-09 21:49:33] Arguments: --nthreads 6
[2025-10-09 21:49:33] Threads: 6
[2025-10-09 21:49:33] Checking for CVMFS
[2025-10-09 21:49:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 21:49:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 21:49:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 21:49:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 21:49:33] 2.13.2.0 2967115 304 62384 151521 3 57 15704752 81920000 0 130560 0 420137 99.991 10778 2740 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-10-09 21:49:33] CVMFS is ok
[2025-10-09 21:49:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 21:49:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 21:49:33] Further information can be found at the LHC@home message board.
[2025-10-09 21:49:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 21:49:33] Checking for apptainer binary...
[2025-10-09 21:49:33] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-10-09 21:49:33] apptainer is not installed, using version from CVMFS
[2025-10-09 21:49:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 21:49:33] monitor-atlas.iep
[2025-10-09 21:49:33] apptainer works
[2025-10-09 21:49:33] Set ATHENA_PROC_NUMBER=6
[2025-10-09 21:49:33] Set ATHENA_CORE_NUMBER=6
[2025-10-09 21:49:33] Starting ATLAS job with PandaID=6837329314
[2025-10-09 21:49:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 22:40:48]  *** The last 200 lines of the pilot log: ***
[2025-10-09 22:40:48]  protocol_id=None
[2025-10-09 22:40:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-09 22:40:48]  replicas=None
[2025-10-09 22:40:48]  scope=mc23_13p6TeV
[2025-10-09 22:40:48]  status=None
[2025-10-09 22:40:48]  status_code=0
[2025-10-09 22:40:48]  storage_token=
[2025-10-09 22:40:48]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6837329314/log.46676269._014252.job.log.tgz.1
[2025-10-09 22:40:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/0b/log.46676269._014252.job.log.tgz.1
[2025-10-09 22:40:48]  workdir=None
[2025-10-09 22:40:48] ]
[2025-10-09 22:40:48] 2025-10-09 20:39:53,949 | INFO     | transferring file log.46676269._014252.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6837329314/log.46676269._014252.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-09 22:40:48] 2025-10-09 20:39:53,949 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6837329314/log.46676269._014252.job.log.tgz.1 /var/lib/boinc/slots/6/log.46676269._014252.job
[2025-10-09 22:40:48] 2025-10-09 20:39:53,956 | INFO     | adding to output.list: log.46676269._014252.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/0b/log.46676269._014252.job.log.tg
[2025-10-09 22:40:48] 2025-10-09 20:39:53,956 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 22:40:48] 2025-10-09 20:39:53,956 | INFO     | summary of transferred files:
[2025-10-09 22:40:48] 2025-10-09 20:39:53,956 | INFO     |  -- lfn=log.46676269._014252.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 22:40:48] 2025-10-09 20:39:53,957 | INFO     | stage-out finished correctly
[2025-10-09 22:40:48] 2025-10-09 20:39:54,590 | INFO     | time since job start (3017s) is within the limit (172800.0s)
[2025-10-09 22:40:48] 2025-10-09 20:39:56,120 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 22:40:48] 2025-10-09 20:39:56,149 | INFO     | job 6837329314 has state=finished
[2025-10-09 22:40:48] 2025-10-09 20:39:56,149 | INFO     | preparing for final server update for job 6837329314 in state='finished'
[2025-10-09 22:40:48] 2025-10-09 20:39:56,149 | INFO     | this job has now completed (state=finished)
[2025-10-09 22:40:48] 2025-10-09 20:39:56,149 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 22:40:48] 2025-10-09 20:39:56,149 | INFO     | log transfer has been attempted: DONE
[2025-10-09 22:40:48] 2025-10-09 20:39:56,149 | INFO     | job 6837329314 has finished - writing final server update
[2025-10-09 22:40:48] 2025-10-09 20:39:56,149 | INFO     | total number of processed events: 400 (read)
[2025-10-09 22:40:48] 2025-10-09 20:39:56,150 | INFO     | executing command: lscpu
[2025-10-09 22:40:48] 2025-10-09 20:39:56,157 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 22:40:48] 2025-10-09 20:39:56,596 | INFO     | time since job start (3019s) is within the limit (172800.0s)
[2025-10-09 22:40:48] 2025-10-09 20:39:58,600 | INFO     | time since job start (3021s) is within the limit (172800.0s)
[2025-10-09 22:40:48] 2025-10-09 20:39:58,712 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 22:40:48] 2025-10-09 20:39:58,712 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4299.961333333334
[2025-10-09 22:40:48] 2025-10-09 20:39:58,713 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6837329314/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 22:40:48] 2025-10-09 20:39:58,713 | INFO     | extracted standard info from prmon json
[2025-10-09 22:40:48] 2025-10-09 20:39:58,713 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 22:40:48] 2025-10-09 20:39:58,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 22:40:48] 2025-10-09 20:39:58,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 22:40:48] 2025-10-09 20:39:58,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | fitting pss+swap vs Time
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | sum of square deviations: 24640462.0
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | sum of deviations: -5634711641.999999
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | mean x: 1760040980.0
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | mean y: 2669901.7441860465
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | -- intersect: 402483897745.7305
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | intersect: 402483897745.7305
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | chi2: 0.07198872501077257
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | -- intersect: 402483897745.7305
[2025-10-09 22:40:48] 2025-10-09 20:39:58,714 | INFO     | current memory leak: -228.68 B/s (using 43 data points, chi2=0.07)
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | could have reported an average CPU frequency of 4300 MHz (5 samples)
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | ..............................
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | . Timing measurements:
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | . get job = 0 s
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | . initial setup = 1 s
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | . payload setup = 2 s
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | . stage-in = 0 s
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | . payload execution = 2998 s
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | . stage-out = 0 s
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | . log creation = 0 s
[2025-10-09 22:40:48] 2025-10-09 20:39:58,715 | INFO     | ..............................
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | 
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | job summary report
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | --------------------------------------------------
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | PanDA job id: 6837329314
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | task id: 46676269
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | errors: (none)
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | pilot state: finished 
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | transexitcode: 0
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | exeerrorcode: 0
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | exeerrordiag: 
[2025-10-09 22:40:48] 2025-10-09 20:39:58,746 | INFO     | exitcode: 0
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | exitmsg: OK
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | cpuconsumptiontime: 16824 s
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | nevents: 400
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | neventsw: 0
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | pid: 3144656
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | pgrp: 3144656
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | corecount: 6
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | event service: False
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | sizes: {0: 2348854, 2: 2349116, 11: 2349144, 3003: 2374600, 3004: 2383598, 3006: 2383654, 3008: 2384008}
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | --------------------------------------------------
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | 
[2025-10-09 22:40:48] 2025-10-09 20:39:58,747 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-09 22:40:48] 2025-10-09 20:39:58,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | job 6837329314 has completed (purged errors)
[2025-10-09 22:40:48] 2025-10-09 20:39:58,756 | INFO     | overall cleanup function is called
[2025-10-09 22:40:48] 2025-10-09 20:39:59,762 | INFO     | --- collectZombieJob: --- 10, [3144656]
[2025-10-09 22:40:48] 2025-10-09 20:39:59,762 | INFO     | zombie collector waiting for pid 3144656
[2025-10-09 22:40:48] 2025-10-09 20:39:59,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 22:40:48] 2025-10-09 20:39:59,762 | INFO     | collected zombie processes
[2025-10-09 22:40:48] 2025-10-09 20:39:59,762 | INFO     | will attempt to kill all subprocesses of pid=3144656
[2025-10-09 22:40:48] 2025-10-09 20:39:59,794 | INFO     | process IDs to be killed: [3144656] (in reverse order)
[2025-10-09 22:40:48] 2025-10-09 20:39:59,811 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 22:40:48] 2025-10-09 20:39:59,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 22:40:48] 2025-10-09 20:39:59,812 | INFO     | did not find any defunct processes belonging to 3144656
[2025-10-09 22:40:48] 2025-10-09 20:39:59,812 | INFO     | did not find any defunct processes belonging to 3144656
[2025-10-09 22:40:48] 2025-10-09 20:39:59,812 | INFO     | ready for new job
[2025-10-09 22:40:48] 2025-10-09 20:39:59,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 22:40:48] 2025-10-09 20:39:59,813 | INFO     | ***************************************
[2025-10-09 22:40:48] 2025-10-09 20:39:59,813 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 22:40:48] 2025-10-09 20:39:59,813 | INFO     | ***************************************
[2025-10-09 22:40:48] 2025-10-09 20:39:59,813 | INFO     | 
[2025-10-09 22:40:48] 2025-10-09 20:39:59,813 | INFO     | architecture information:
[2025-10-09 22:40:48] 2025-10-09 20:39:59,813 | INFO     | executing command: cat /etc/os-release
[2025-10-09 22:40:48] 2025-10-09 20:39:59,819 | INFO     | cat /etc/os-release:
[2025-10-09 22:40:48] NAME="CentOS Linux"
[2025-10-09 22:40:48] VERSION="7 (Core)"
[2025-10-09 22:40:48] ID="centos"
[2025-10-09 22:40:48] ID_LIKE="rhel fedora"
[2025-10-09 22:40:48] VERSION_ID="7"
[2025-10-09 22:40:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 22:40:48] ANSI_COLOR="0;31"
[2025-10-09 22:40:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 22:40:48] HOME_URL="https://www.centos.org/"
[2025-10-09 22:40:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 22:40:48] 
[2025-10-09 22:40:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 22:40:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 22:40:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 22:40:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 22:40:48] 
[2025-10-09 22:40:48] 2025-10-09 20:39:59,819 | INFO     | ***************************************
[2025-10-09 22:40:48] 2025-10-09 20:40:00,132 | WARNING  | process 3144656 can no longer be monitored (due to stat problems) - aborting
[2025-10-09 22:40:48] 2025-10-09 20:40:00,158 | INFO     | using path: /var/lib/boinc/slots/6/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 22:40:48] 2025-10-09 20:40:00,190 | INFO     | number of running child processes to parent process 3144656: 1
[2025-10-09 22:40:48] 2025-10-09 20:40:00,190 | INFO     | maximum number of monitored processes: 6
[2025-10-09 22:40:48] 2025-10-09 20:40:00,190 | INFO     | aborting job monitoring since job object (job id=6837329314) has expired
[2025-10-09 22:40:48] 2025-10-09 20:40:00,322 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-09 22:40:48] 2025-10-09 20:40:00,328 | INFO     | sufficient remaining disk space (871381336064 B)
[2025-10-09 22:40:48] 2025-10-09 20:40:00,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 22:40:48] 2025-10-09 20:40:00,328 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 22:40:48] 2025-10-09 20:40:00,328 | INFO     | update_server=False
[2025-10-09 22:40:48] 2025-10-09 20:40:00,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 22:40:48] 2025-10-09 20:40:00,328 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-09 22:40:48] 2025-10-09 20:40:00,328 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 22:40:48] 2025-10-09 20:40:00,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 22:40:48] 2025-10-09 20:40:00,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 22:40:48] 2025-10-09 20:40:00,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 22:40:48] 2025-10-09 20:40:00,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 22:40:48] 2025-10-09 20:40:00,329 | INFO     | will abort loop
[2025-10-09 22:40:48] 2025-10-09 20:40:00,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 22:40:48] 2025-10-09 20:40:00,905 | INFO     | all payload control threads have been joined
[2025-10-09 22:40:48] 2025-10-09 20:40:01,115 | INFO     | all data control threads have been joined
[2025-10-09 22:40:48] 2025-10-09 20:40:01,329 | INFO     | [job] queue monitor thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:01,333 | INFO     | [job] retrieve thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:01,334 | INFO     | [job] job monitor thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:01,444 | INFO     | [payload] failed_post thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:01,865 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:01,910 | INFO     | [payload] control thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:01,985 | INFO     | all job control threads have been joined
[2025-10-09 22:40:48] 2025-10-09 20:40:02,120 | INFO     | [data] control thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:02,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 22:40:48] 2025-10-09 20:40:02,334 | INFO     | [data] copytool_out thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:02,396 | INFO     | [payload] validate_post thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:02,422 | INFO     | [job] validate thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:02,536 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:02,580 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:02,644 | INFO     | [data] copytool_in thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:02,989 | INFO     | [job] control thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:06,160 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:10,718 | INFO     | job.realtimelogging is not enabled
[2025-10-09 22:40:48] 2025-10-09 20:40:11,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 22:40:48] 2025-10-09 20:40:42,210 | INFO     | [monitor] cgroup control has ended
[2025-10-09 22:40:48] 2025-10-09 20:40:42,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865011423040)>', '<ExcThread(monitor, started 139864301352704)>']
[2025-10-09 22:40:48] 2025-10-09 20:40:43,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 22:40:48] 2025-10-09 20:40:43,541 | INFO     | [monitor] control thread has ended
[2025-10-09 22:40:48] 2025-10-09 20:40:48,013 | INFO     | all workflow threads have been joined
[2025-10-09 22:40:48] 2025-10-09 20:40:48,013 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 22:40:48] 2025-10-09 20:40:48,013 | INFO     | traces error code: 0
[2025-10-09 22:40:48] 2025-10-09 20:40:48,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 22:40:48] 2025-10-09 20:40:48,057 [wrapper] ==== pilot stdout END ====
[2025-10-09 22:40:48] 2025-10-09 20:40:48,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 22:40:48] 2025-10-09 20:40:48,059 [wrapper] pilotpid: 3138091
[2025-10-09 22:40:48] 2025-10-09 20:40:48,060 [wrapper] Pilot exit status: 0
[2025-10-09 22:40:48] 2025-10-09 20:40:48,063 [wrapper] pandaids: 6837329314
[2025-10-09 22:40:48] 2025-10-09 20:40:48,072 [wrapper] cleanup supervisor_pilot 3158866 3138092
[2025-10-09 22:40:48] 2025-10-09 20:40:48,073 [wrapper] Test setup, not cleaning
[2025-10-09 22:40:48] 2025-10-09 20:40:48,074 [wrapper] apfmon messages muted
[2025-10-09 22:40:48] 2025-10-09 20:40:48,075 [wrapper] ==== wrapper stdout END ====
[2025-10-09 22:40:48] 2025-10-09 20:40:48,076 [wrapper] ==== wrapper stderr END ====
[2025-10-09 22:40:48]  *** Error codes and diagnostics ***
[2025-10-09 22:40:48]     "exeErrorCode": 0,
[2025-10-09 22:40:48]     "exeErrorDiag": "",
[2025-10-09 22:40:48]     "pilotErrorCode": 0,
[2025-10-09 22:40:48]     "pilotErrorDiag": "",
[2025-10-09 22:40:48]  *** Listing of results directory ***
[2025-10-09 22:40:48] total 409628
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc    557409 Oct  9 12:27 pilot3.tar.gz
[2025-10-09 22:40:48] -rwx------ 1 boinc boinc     36292 Oct  9 12:51 runpilot2-wrapper.sh
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc      5112 Oct  9 12:51 queuedata.json
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc       100 Oct  9 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 22:40:48] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 21:49 run_atlas
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc       105 Oct  9 21:49 job.xml
[2025-10-09 22:40:48] -rw-r--r-- 2 boinc boinc     15120 Oct  9 21:49 start_atlas.sh
[2025-10-09 22:40:48] drwxrwx--x 2 boinc boinc        68 Oct  9 21:49 shared
[2025-10-09 22:40:48] -rw-r--r-- 2 boinc boinc    569674 Oct  9 21:49 input.tar.gz
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc      6549 Oct  9 21:49 init_data.xml
[2025-10-09 22:40:48] -rw-r--r-- 2 boinc boinc 219712299 Oct  9 21:49 EVNT.46676267._000585.pool.root.1
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc         0 Oct  9 21:49 boinc_lockfile
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc      2549 Oct  9 21:49 pandaJob.out
[2025-10-09 22:40:48] -rw------- 1 boinc boinc    975454 Oct  9 21:49 agis_schedconf.cvmfs.json
[2025-10-09 22:40:48] -rw------- 1 boinc boinc   1560401 Oct  9 21:49 agis_ddmendpoints.agis.ALL.json
[2025-10-09 22:40:48] drwx------ 5 boinc boinc      4096 Oct  9 21:49 pilot3
[2025-10-09 22:40:48] -rw------- 1 boinc boinc 194423502 Oct  9 22:39 HITS.46676269._014252.pool.root.1
[2025-10-09 22:40:48] -rw------- 1 boinc boinc      1021 Oct  9 22:39 memory_monitor_summary.json
[2025-10-09 22:40:48] -rw------- 1 boinc boinc        95 Oct  9 22:39 pilot_heartbeat.json
[2025-10-09 22:40:48] -rw------- 1 boinc boinc    256303 Oct  9 22:39 log.46676269._014252.job.log.tgz.1
[2025-10-09 22:40:48] -rw------- 1 boinc boinc      7793 Oct  9 22:39 heartbeat.json
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc       529 Oct  9 22:40 boinc_task_state.xml
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc      8192 Oct  9 22:40 boinc_mmap_file
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc        27 Oct  9 22:40 wrapper_checkpoint.txt
[2025-10-09 22:40:48] -rw------- 1 boinc boinc      5146 Oct  9 22:40 pilotlog.txt
[2025-10-09 22:40:48] -rw------- 1 boinc boinc    463492 Oct  9 22:40 log.46676269._014252.job.log.1
[2025-10-09 22:40:48] -rw------- 1 boinc boinc       357 Oct  9 22:40 output.list
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc       620 Oct  9 22:40 runtime_log
[2025-10-09 22:40:48] -rw------- 1 boinc boinc    737280 Oct  9 22:40 result.tar.gz
[2025-10-09 22:40:48] -rw------- 1 boinc boinc       655 Oct  9 22:40 S7SMDmYQ3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkKZNDmKi7zzm.diag
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc      8716 Oct  9 22:40 runtime_log.err
[2025-10-09 22:40:48] -rw-r--r-- 1 boinc boinc     21816 Oct  9 22:40 stderr.txt
[2025-10-09 22:40:48] HITS file was successfully produced:
[2025-10-09 22:40:48] -rw------- 1 boinc boinc 194423502 Oct  9 22:39 shared/HITS.pool.root.1
[2025-10-09 22:40:48]  *** Contents of shared directory: ***
[2025-10-09 22:40:48] total 405728
[2025-10-09 22:40:48] -rw-r--r-- 2 boinc boinc     15120 Oct  9 21:49 start_atlas.sh
[2025-10-09 22:40:48] -rw-r--r-- 2 boinc boinc    569674 Oct  9 21:49 input.tar.gz
[2025-10-09 22:40:48] -rw-r--r-- 2 boinc boinc 219712299 Oct  9 21:49 ATLAS.root_0
[2025-10-09 22:40:48] -rw------- 1 boinc boinc 194423502 Oct  9 22:39 HITS.pool.root.1
[2025-10-09 22:40:48] -rw------- 1 boinc boinc    737280 Oct  9 22:40 result.tar.gz
22:40:49 (3134407): run_atlas exited; CPU time 16838.773136
22:40:49 (3134407): called boinc_finish(0)

</stderr_txt>
]]>

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