Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:48:44 (2934235): wrapper (7.7.26015): starting
18:48:44 (2934235): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 18:48:44] Arguments: --nthreads 12
[2025-10-09 18:48:44] Threads: 12
[2025-10-09 18:48:44] Checking for CVMFS
[2025-10-09 18:48:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 18:48:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 18:48:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 18:48:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 18:48:46] 2.13.2.0 116703 134411 285468 151526 3 257 22686666 32935937 25574 16776704 0 81991612 99.647 78443275 30660 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 18:48:46] CVMFS is ok
[2025-10-09 18:48:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 18:48:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 18:48:47] Further information can be found at the LHC@home message board.
[2025-10-09 18:48:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 18:48:47] Checking for apptainer binary...
[2025-10-09 18:48:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 18:48:47] Running /usr/bin/apptainer --version
[2025-10-09 18:48:47] apptainer version 1.4.3-1.el9
[2025-10-09 18:48:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 18:48:47] c-5-3.aglt2.org
[2025-10-09 18:48:47] apptainer works
[2025-10-09 18:48:48] Set ATHENA_PROC_NUMBER=12
[2025-10-09 18:48:48] Set ATHENA_CORE_NUMBER=12
[2025-10-09 18:48:48] Starting ATLAS job with PandaID=6835800798
[2025-10-09 18:48:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 06:57:29]  *** The last 200 lines of the pilot log: ***
[2025-10-10 06:57:29] 2025-10-10 10:00:39,176 | INFO     | mean x: 1760070258.3920972
[2025-10-10 06:57:29] 2025-10-10 10:00:39,177 | INFO     | mean y: 2273969.4802431613
[2025-10-10 06:57:29] 2025-10-10 10:00:39,222 | INFO     | -- intersect: 9445882147.579004
[2025-10-10 06:57:29] 2025-10-10 10:00:39,222 | INFO     | intersect: 9445882147.579004
[2025-10-10 06:57:29] 2025-10-10 10:00:39,229 | INFO     | chi2: 6.665098375042506
[2025-10-10 06:57:29] 2025-10-10 10:00:39,230 | INFO     | sum of square deviations: 86348018074.52997
[2025-10-10 06:57:29] 2025-10-10 10:00:39,544 | INFO     | sum of deviations: -311241105337.79645
[2025-10-10 06:57:29] 2025-10-10 10:00:39,589 | INFO     | mean x: 1760070105.9004595
[2025-10-10 06:57:29] 2025-10-10 10:00:39,590 | INFO     | mean y: 2286377.9877488515
[2025-10-10 06:57:29] 2025-10-10 10:00:39,590 | INFO     | -- intersect: 6346452433.537988
[2025-10-10 06:57:29] 2025-10-10 10:00:39,590 | INFO     | intersect: 6346452433.537988
[2025-10-10 06:57:29] 2025-10-10 10:00:39,591 | INFO     | chi2: 3.7085529544630367
[2025-10-10 06:57:29] 2025-10-10 10:00:39,591 | INFO     | current chi2=3.7085529544630367 (change=44.35861639567494 %)
[2025-10-10 06:57:29] 2025-10-10 10:00:39,592 | INFO     | sum of square deviations: 84380091328.80855
[2025-10-10 06:57:29] 2025-10-10 10:00:39,706 | INFO     | sum of deviations: -270061717334.6019
[2025-10-10 06:57:29] 2025-10-10 10:00:39,707 | INFO     | mean x: 1760069953.4104939
[2025-10-10 06:57:29] 2025-10-10 10:00:39,760 | INFO     | mean y: 2289566.412037037
[2025-10-10 06:57:29] 2025-10-10 10:00:39,760 | INFO     | -- intersect: 5635460931.382902
[2025-10-10 06:57:29] 2025-10-10 10:00:39,761 | INFO     | intersect: 5635460931.382902
[2025-10-10 06:57:29] 2025-10-10 10:00:39,762 | INFO     | chi2: 3.566377777096279
[2025-10-10 06:57:29] 2025-10-10 10:00:39,762 | INFO     | current chi2=3.566377777096279 (change=3.8337103207777514 %)
[2025-10-10 06:57:29] 2025-10-10 10:00:39,762 | INFO     | right removable region: 647
[2025-10-10 06:57:29] 2025-10-10 10:00:39,763 | INFO     | sum of square deviations: 86347418561.30165
[2025-10-10 06:57:29] 2025-10-10 10:00:39,908 | INFO     | sum of deviations: -587198573659.1991
[2025-10-10 06:57:29] 2025-10-10 10:00:39,909 | INFO     | mean x: 1760070410.906585
[2025-10-10 06:57:29] 2025-10-10 10:00:39,967 | INFO     | mean y: 2282585.7672281777
[2025-10-10 06:57:29] 2025-10-10 10:00:39,967 | INFO     | -- intersect: 11971497786.918547
[2025-10-10 06:57:29] 2025-10-10 10:00:39,967 | INFO     | intersect: 11971497786.918547
[2025-10-10 06:57:29] 2025-10-10 10:00:39,968 | INFO     | chi2: 4.977100506296553
[2025-10-10 06:57:29] 2025-10-10 10:00:39,969 | INFO     | current chi2=4.977100506296553 (change=25.32592579678447 %)
[2025-10-10 06:57:29] 2025-10-10 10:00:39,969 | INFO     | sum of square deviations: 84378932749.66504
[2025-10-10 06:57:29] 2025-10-10 10:00:40,391 | INFO     | time since job start (40286s) is within the limit (172800.0s)
[2025-10-10 06:57:29] 2025-10-10 10:00:40,406 | INFO     | sum of deviations: -571742646272.8717
[2025-10-10 06:57:29] 2025-10-10 10:00:40,407 | INFO     | mean x: 1760070563.4182098
[2025-10-10 06:57:29] 2025-10-10 10:00:40,407 | INFO     | mean y: 2281381.9552469137
[2025-10-10 06:57:29] 2025-10-10 10:00:40,407 | INFO     | -- intersect: 11928331745.038397
[2025-10-10 06:57:29] 2025-10-10 10:00:40,407 | INFO     | intersect: 11928331745.038397
[2025-10-10 06:57:29] 2025-10-10 10:00:40,408 | INFO     | chi2: 4.936895172513058
[2025-10-10 06:57:29] 2025-10-10 10:00:40,408 | INFO     | current chi2=4.936895172513058 (change=0.8078063469409825 %)
[2025-10-10 06:57:29] 2025-10-10 10:00:40,409 | INFO     | left removable region: 20
[2025-10-10 06:57:29] 2025-10-10 10:00:40,409 | INFO     | sum of square deviations: 76439010140.9221
[2025-10-10 06:57:29] 2025-10-10 10:00:40,767 | INFO     | sum of deviations: -290679755649.0286
[2025-10-10 06:57:29] 2025-10-10 10:00:40,767 | INFO     | mean x: 1760070532.9585328
[2025-10-10 06:57:29] 2025-10-10 10:00:40,768 | INFO     | mean y: 2292071.2296650717
[2025-10-10 06:57:29] 2025-10-10 10:00:40,768 | INFO     | -- intersect: 6695430450.471243
[2025-10-10 06:57:29] 2025-10-10 10:00:40,768 | INFO     | intersect: 6695430450.471243
[2025-10-10 06:57:29] 2025-10-10 10:00:40,769 | INFO     | chi2: 1.644419371567895
[2025-10-10 06:57:29] 2025-10-10 10:00:40,771 | INFO     | -- intersect: 6695430450.471243
[2025-10-10 06:57:29] 2025-10-10 10:00:40,771 | INFO     | current memory leak: -3.80 B/s (using 627 data points, chi2=1.64)
[2025-10-10 06:57:29] 2025-10-10 10:00:40,772 | INFO     | could have reported an average CPU frequency of 2599 MHz (25 samples)
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | ..............................
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | . Timing measurements:
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | . get job = 0 s
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | . initial setup = 3 s
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | . payload setup = 13 s
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | . stage-in = 0 s
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | . payload execution = 40151 s
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | . stage-out = 16 s
[2025-10-10 06:57:29] 2025-10-10 10:00:40,773 | INFO     | . log creation = 3 s
[2025-10-10 06:57:29] 2025-10-10 10:00:40,774 | INFO     | ..............................
[2025-10-10 06:57:29] 2025-10-10 10:00:42,730 | INFO     | time since job start (40288s) is within the limit (172800.0s)
[2025-10-10 06:57:29] 2025-10-10 10:00:43,519 | INFO     | 
[2025-10-10 06:57:29] 2025-10-10 10:00:43,519 | INFO     | job summary report
[2025-10-10 06:57:29] 2025-10-10 10:00:43,519 | INFO     | --------------------------------------------------
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | PanDA job id: 6835800798
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | task id: 46676269
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | errors: (none)
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | pilot state: finished 
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | transexitcode: 0
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | exeerrorcode: 0
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | exeerrordiag: 
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | exitcode: 0
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | exitmsg: OK
[2025-10-10 06:57:29] 2025-10-10 10:00:43,520 | INFO     | cpuconsumptiontime: 51441 s
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | nevents: 400
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | neventsw: 0
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | pid: 2948158
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | pgrp: 2948158
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | corecount: 12
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | event service: False
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | sizes: {0: 2348623, 1: 2348707, 2: 2348906, 13: 2348906, 14: 2349224, 23: 2349252, 40169: 2390120, 40170: 2390119, 40188: 2399173, 40190: 2399229, 40257: 2399487}
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | --------------------------------------------------
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | 
[2025-10-10 06:57:29] 2025-10-10 10:00:43,521 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 06:57:29] 2025-10-10 10:00:44,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,057 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,057 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,059 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 06:57:29] 2025-10-10 10:00:44,059 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,059 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 06:57:29] 2025-10-10 10:00:44,059 | INFO     | job 6835800798 has completed (purged errors)
[2025-10-10 06:57:29] 2025-10-10 10:00:44,059 | INFO     | overall cleanup function is called
[2025-10-10 06:57:29] 2025-10-10 10:00:45,162 | INFO     | --- collectZombieJob: --- 10, [2948158]
[2025-10-10 06:57:29] 2025-10-10 10:00:45,162 | INFO     | zombie collector waiting for pid 2948158
[2025-10-10 06:57:29] 2025-10-10 10:00:45,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 06:57:29] 2025-10-10 10:00:45,163 | INFO     | collected zombie processes
[2025-10-10 06:57:29] 2025-10-10 10:00:45,163 | INFO     | will attempt to kill all subprocesses of pid=2948158
[2025-10-10 06:57:29] 2025-10-10 10:00:49,370 | INFO     | PID=2939194 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 06:57:29] 2025-10-10 10:00:49,370 | INFO     | .. there are 42 such processes running
[2025-10-10 06:57:29] 2025-10-10 10:00:49,612 | INFO     | process IDs to be killed: [2948158] (in reverse order)
[2025-10-10 06:57:29] 2025-10-10 10:00:50,850 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 06:57:29] 2025-10-10 10:00:50,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 06:57:29] 2025-10-10 10:00:51,082 | INFO     | did not find any defunct processes belonging to 2948158
[2025-10-10 06:57:29] 2025-10-10 10:00:51,097 | INFO     | did not find any defunct processes belonging to 2948158
[2025-10-10 06:57:29] 2025-10-10 10:00:51,098 | INFO     | ready for new job
[2025-10-10 06:57:29] 2025-10-10 10:00:51,098 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 06:57:29] 2025-10-10 10:00:51,101 | INFO     | ***************************************
[2025-10-10 06:57:29] 2025-10-10 10:00:51,101 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 06:57:29] 2025-10-10 10:00:51,101 | INFO     | ***************************************
[2025-10-10 06:57:29] 2025-10-10 10:00:51,101 | INFO     | 
[2025-10-10 06:57:29] 2025-10-10 10:00:51,116 | INFO     | architecture information:
[2025-10-10 06:57:29] 2025-10-10 10:00:51,180 | INFO     | executing command: cat /etc/os-release
[2025-10-10 06:57:29] 2025-10-10 10:00:51,261 | INFO     | cat /etc/os-release:
[2025-10-10 06:57:29] NAME="CentOS Linux"
[2025-10-10 06:57:29] VERSION="7 (Core)"
[2025-10-10 06:57:29] ID="centos"
[2025-10-10 06:57:29] ID_LIKE="rhel fedora"
[2025-10-10 06:57:29] VERSION_ID="7"
[2025-10-10 06:57:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 06:57:29] ANSI_COLOR="0;31"
[2025-10-10 06:57:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 06:57:29] HOME_URL="https://www.centos.org/"
[2025-10-10 06:57:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 06:57:29] 
[2025-10-10 06:57:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 06:57:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 06:57:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 06:57:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 06:57:29] 
[2025-10-10 06:57:29] 2025-10-10 10:00:51,262 | INFO     | ***************************************
[2025-10-10 06:57:29] 2025-10-10 10:00:51,778 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 06:57:29] 2025-10-10 10:00:52,083 | INFO     | sufficient remaining disk space (74695311360 B)
[2025-10-10 06:57:29] 2025-10-10 10:00:52,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 06:57:29] 2025-10-10 10:00:52,084 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 06:57:29] 2025-10-10 10:00:52,084 | INFO     | update_server=False
[2025-10-10 06:57:29] 2025-10-10 10:00:52,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 06:57:29] 2025-10-10 10:00:52,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 06:57:29] 2025-10-10 10:00:52,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 06:57:29] 2025-10-10 10:00:52,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 06:57:29] 2025-10-10 10:00:52,417 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 06:57:29] 2025-10-10 10:00:52,465 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 06:57:29] 2025-10-10 10:00:52,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 06:57:29] 2025-10-10 10:00:52,466 | INFO     | will abort loop
[2025-10-10 06:57:29] 2025-10-10 10:00:52,994 | INFO     | all payload control threads have been joined
[2025-10-10 06:57:29] 2025-10-10 10:00:53,090 | INFO     | [job] retrieve thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:53,219 | INFO     | all job control threads have been joined
[2025-10-10 06:57:29] 2025-10-10 10:00:53,240 | INFO     | all data control threads have been joined
[2025-10-10 06:57:29] 2025-10-10 10:00:53,305 | INFO     | [job] queue monitor thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:53,342 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:53,349 | INFO     | [job] validate thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:53,471 | INFO     | [job] job monitor thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:53,493 | INFO     | [payload] validate_post thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:53,933 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:53,937 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:53,941 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:54,000 | INFO     | [payload] control thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:54,065 | INFO     | [payload] failed_post thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:54,145 | INFO     | [data] copytool_out thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:54,225 | INFO     | [job] control thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:54,246 | INFO     | [data] control thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:54,544 | INFO     | [data] copytool_in thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:00:56,161 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 06:57:29] 2025-10-10 10:01:26,307 | INFO     | PID=2939194 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 06:57:29] 2025-10-10 10:01:26,307 | INFO     | .. there are 42 such processes running
[2025-10-10 06:57:29] 2025-10-10 10:01:26,308 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 06:57:29] 2025-10-10 10:01:26,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 06:57:29] 2025-10-10 10:01:26,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 06:57:29] 2025-10-10 10:01:42,154 | INFO     | [monitor] cgroup control has ended
[2025-10-10 06:57:29] 2025-10-10 10:01:42,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401580476224)>', '<ExcThread(monitor, started 140400660571904)>']
[2025-10-10 06:57:29] 2025-10-10 10:01:43,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 06:57:29] 2025-10-10 10:01:43,466 | INFO     | [monitor] control thread has ended
[2025-10-10 06:57:29] 2025-10-10 10:01:48,034 | INFO     | all workflow threads have been joined
[2025-10-10 06:57:29] 2025-10-10 10:01:48,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 06:57:29] 2025-10-10 10:01:48,035 | INFO     | traces error code: 0
[2025-10-10 06:57:29] 2025-10-10 10:01:48,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 06:57:29] 2025-10-10 10:01:54,860 [wrapper] ==== pilot stdout END ====
[2025-10-10 06:57:29] 2025-10-10 10:01:54,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 06:57:29] 2025-10-10 10:01:55,011 [wrapper] pilotpid: 2939194
[2025-10-10 06:57:29] 2025-10-10 10:01:55,095 [wrapper] Pilot exit status: 0
[2025-10-10 06:57:29] 2025-10-10 10:01:55,265 [wrapper] pandaids: 6835800798
[2025-10-10 06:57:29] 2025-10-10 10:01:56,145 [wrapper] cleanup supervisor_pilot  881943 2939195
[2025-10-10 06:57:29] 2025-10-10 10:01:56,224 [wrapper] Test setup, not cleaning
[2025-10-10 06:57:29] 2025-10-10 10:01:56,277 [wrapper] apfmon messages muted
[2025-10-10 06:57:29] 2025-10-10 10:01:56,350 [wrapper] ==== wrapper stdout END ====
[2025-10-10 06:57:29] 2025-10-10 10:01:56,389 [wrapper] ==== wrapper stderr END ====
[2025-10-10 06:57:29]  *** Error codes and diagnostics ***
[2025-10-10 06:57:29]     "exeErrorCode": 0,
[2025-10-10 06:57:29]     "exeErrorDiag": "",
[2025-10-10 06:57:29]     "pilotErrorCode": 0,
[2025-10-10 06:57:29]     "pilotErrorDiag": "",
[2025-10-10 06:57:29]  *** Listing of results directory ***
[2025-10-10 06:57:29] total 420644
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas    552446 Oct  8 02:43 pilot3.tar.gz
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 02:57 queuedata.json
[2025-10-10 06:57:29] -rwx------. 1 boincer umatlas     36292 Oct  8 02:57 runpilot2-wrapper.sh
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas       100 Oct  9 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 06:57:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 18:48 run_atlas
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas       105 Oct  9 18:48 job.xml
[2025-10-10 06:57:29] -rw-r--r--. 2 boincer umatlas 221458441 Oct  9 18:48 EVNT.46676267._000043.pool.root.1
[2025-10-10 06:57:29] -rw-r--r--. 2 boincer umatlas    565602 Oct  9 18:48 input.tar.gz
[2025-10-10 06:57:29] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 18:48 shared
[2025-10-10 06:57:29] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 18:48 start_atlas.sh
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas         0 Oct  9 18:48 boinc_lockfile
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas      2547 Oct  9 18:48 pandaJob.out
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas    975454 Oct  9 18:49 agis_schedconf.cvmfs.json
[2025-10-10 06:57:29] drwx------. 4 boincer umatlas      4096 Oct  9 18:49 pilot3
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas 195615530 Oct 10 05:54 HITS.46676269._001065.pool.root.1
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas       531 Oct 10 05:55 boinc_task_state.xml
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas      1043 Oct 10 05:59 memory_monitor_summary.json
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas   1560580 Oct 10 05:59 agis_ddmendpoints.agis.ALL.json
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas    782809 Oct 10 05:59 log.46676269._001065.job.log.tgz.1
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas        95 Oct 10 06:00 pilot_heartbeat.json
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas      7821 Oct 10 06:00 heartbeat.json
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas      5010 Oct 10 06:01 pilotlog.txt
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas   4100145 Oct 10 06:01 log.46676269._001065.job.log.1
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas       357 Oct 10 06:01 output.list
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas       620 Oct 10 06:01 runtime_log
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas   4904960 Oct 10 06:01 result.tar.gz
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas       656 Oct 10 06:01 rVIODmcIdQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIUXNDmFV6jEo.diag
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas      8691 Oct 10 06:01 runtime_log.err
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas      6707 Oct 10 06:57 init_data.xml
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 06:57 boinc_mmap_file
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas        28 Oct 10 06:57 wrapper_checkpoint.txt
[2025-10-10 06:57:29] -rw-r--r--. 1 boincer umatlas     21227 Oct 10 06:57 stderr.txt
[2025-10-10 06:57:29] HITS file was successfully produced:
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas 195615530 Oct 10 05:54 shared/HITS.pool.root.1
[2025-10-10 06:57:29]  *** Contents of shared directory: ***
[2025-10-10 06:57:29] total 412672
[2025-10-10 06:57:29] -rw-r--r--. 2 boincer umatlas 221458441 Oct  9 18:48 ATLAS.root_0
[2025-10-10 06:57:29] -rw-r--r--. 2 boincer umatlas    565602 Oct  9 18:48 input.tar.gz
[2025-10-10 06:57:29] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 18:48 start_atlas.sh
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas 195615530 Oct 10 05:54 HITS.pool.root.1
[2025-10-10 06:57:29] -rw-------. 1 boincer umatlas   4904960 Oct 10 06:01 result.tar.gz
06:57:31 (2934235): run_atlas exited; CPU time 52941.186045
06:57:31 (2934235): called boinc_finish(0)

</stderr_txt>
]]>

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