Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:48:42 (1282560): wrapper (7.7.26015): starting
11:48:42 (1282560): wrapper: running run_atlas (--nthreads 9)
[2025-10-09 11:48:42] Arguments: --nthreads 9
[2025-10-09 11:48:42] Threads: 9
[2025-10-09 11:48:42] Checking for CVMFS
[2025-10-09 11:48:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 11:48:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 11:48:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 11:48:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 11:48:42] 2.13.2.0 709547 73263 445808 151513 0 1067 28127527 32935937 31183 16776704 0 506496052 99.700 381501012 17455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 11:48:42] CVMFS is ok
[2025-10-09 11:48:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 11:48:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 11:48:42] Further information can be found at the LHC@home message board.
[2025-10-09 11:48:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 11:48:42] Checking for apptainer binary...
[2025-10-09 11:48:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 11:48:42] Running /usr/bin/apptainer --version
[2025-10-09 11:48:42] apptainer version 1.4.3-1.el9
[2025-10-09 11:48:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 11:48:43] c7-2-37.aglt2.org
[2025-10-09 11:48:43] apptainer works
[2025-10-09 11:48:43] Set ATHENA_PROC_NUMBER=9
[2025-10-09 11:48:43] Set ATHENA_CORE_NUMBER=9
[2025-10-09 11:48:43] Starting ATLAS job with PandaID=6826326103
[2025-10-09 11:48:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 13:46:44]  *** The last 200 lines of the pilot log: ***
[2025-10-09 13:46:44] 2025-10-09 17:46:10,145 | INFO     | sum of deviations: 14929299105.572735
[2025-10-09 13:46:44] 2025-10-09 17:46:10,146 | INFO     | mean x: 1760028305.5181818
[2025-10-09 13:46:44] 2025-10-09 17:46:10,146 | INFO     | mean y: 2228514.463636364
[2025-10-09 13:46:44] 2025-10-09 17:46:10,146 | INFO     | -- intersect: -63669941812.285194
[2025-10-09 13:46:44] 2025-10-09 17:46:10,146 | INFO     | intersect: -63669941812.285194
[2025-10-09 13:46:44] 2025-10-09 17:46:10,146 | INFO     | chi2: 1.5588484195860948
[2025-10-09 13:46:44] 2025-10-09 17:46:10,146 | INFO     | current chi2=1.5588484195860948 (change=30.32389491106553 %)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,146 | INFO     | sum of square deviations: 358917657.9619045
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | sum of deviations: 14421479511.580954
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | mean x: 1760028153.0190477
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | mean y: 2227077.2095238096
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | -- intersect: -70716528006.34206
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | intersect: -70716528006.34206
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | chi2: 1.5591599399858955
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | current chi2=1.5591599399858955 (change=-0.01998400844409699 %)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | right removable region: 104
[2025-10-09 13:46:44] 2025-10-09 17:46:10,147 | INFO     | sum of square deviations: 412674975.46363544
[2025-10-09 13:46:44] 2025-10-09 17:46:10,148 | INFO     | sum of deviations: -9021411064.927273
[2025-10-09 13:46:44] 2025-10-09 17:46:10,148 | INFO     | mean x: 1760028610.5181818
[2025-10-09 13:46:44] 2025-10-09 17:46:10,148 | INFO     | mean y: 2256923.963636364
[2025-10-09 13:46:44] 2025-10-09 17:46:10,148 | INFO     | -- intersect: 38477915797.33879
[2025-10-09 13:46:44] 2025-10-09 17:46:10,148 | INFO     | intersect: 38477915797.33879
[2025-10-09 13:46:44] 2025-10-09 17:46:10,148 | INFO     | chi2: 0.74469482828389
[2025-10-09 13:46:44] 2025-10-09 17:46:10,149 | INFO     | current chi2=0.74469482828389 (change=66.7142523527262 %)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,149 | INFO     | sum of square deviations: 358921682.9904774
[2025-10-09 13:46:44] 2025-10-09 17:46:10,149 | INFO     | sum of deviations: -9500672335.133333
[2025-10-09 13:46:44] 2025-10-09 17:46:10,149 | INFO     | mean x: 1760028763.0095239
[2025-10-09 13:46:44] 2025-10-09 17:46:10,149 | INFO     | mean y: 2258224.1333333333
[2025-10-09 13:46:44] 2025-10-09 17:46:10,149 | INFO     | -- intersect: 46590295030.50027
[2025-10-09 13:46:44] 2025-10-09 17:46:10,150 | INFO     | intersect: 46590295030.50027
[2025-10-09 13:46:44] 2025-10-09 17:46:10,150 | INFO     | chi2: 0.7365187380535609
[2025-10-09 13:46:44] 2025-10-09 17:46:10,150 | INFO     | current chi2=0.7365187380535609 (change=1.0979115094931473 %)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,150 | INFO     | left removable region: 20
[2025-10-09 13:46:44] 2025-10-09 17:46:10,150 | INFO     | sum of square deviations: 183761585.0
[2025-10-09 13:46:44] 2025-10-09 17:46:10,150 | INFO     | sum of deviations: -2506223094.5000005
[2025-10-09 13:46:44] 2025-10-09 17:46:10,150 | INFO     | mean x: 1760028732.5
[2025-10-09 13:46:44] 2025-10-09 17:46:10,150 | INFO     | mean y: 2279858.4404761903
[2025-10-09 13:46:44] 2025-10-09 17:46:10,151 | INFO     | -- intersect: 24006342820.648075
[2025-10-09 13:46:44] 2025-10-09 17:46:10,151 | INFO     | intersect: 24006342820.648075
[2025-10-09 13:46:44] 2025-10-09 17:46:10,151 | INFO     | chi2: 0.030956394292757566
[2025-10-09 13:46:44] 2025-10-09 17:46:10,151 | INFO     | -- intersect: 24006342820.648075
[2025-10-09 13:46:44] 2025-10-09 17:46:10,151 | INFO     | current memory leak: -13.64 B/s (using 84 data points, chi2=0.03)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,151 | INFO     | could have reported an average CPU frequency of 3220 MHz (7 samples)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,151 | INFO     | ..............................
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | . Timing measurements:
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | . get job = 0 s
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | . initial setup = 2 s
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | . payload setup = 10 s
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | . stage-in = 0 s
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | . payload execution = 6969 s
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | . stage-out = 1 s
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | . log creation = 0 s
[2025-10-09 13:46:44] 2025-10-09 17:46:10,152 | INFO     | ..............................
[2025-10-09 13:46:44] 2025-10-09 17:46:10,238 | INFO     | 
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | job summary report
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | --------------------------------------------------
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | PanDA job id: 6826326103
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | task id: 46373048
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | errors: (none)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | pilot state: finished 
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | transexitcode: 0
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | exeerrorcode: 0
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | exeerrordiag: 
[2025-10-09 13:46:44] 2025-10-09 17:46:10,239 | INFO     | exitcode: 0
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | exitmsg: OK
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | cpuconsumptiontime: 39080 s
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | nevents: 400
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | neventsw: 0
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | pid: 1316868
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | pgrp: 1316868
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | corecount: 9
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | event service: False
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | sizes: {0: 2348670, 1: 2348869, 8: 2349131, 11: 2349159, 6983: 2376356, 6984: 2385354, 6985: 2385538, 7007: 2385732}
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | --------------------------------------------------
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | 
[2025-10-09 13:46:44] 2025-10-09 17:46:10,240 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-09 13:46:44] 2025-10-09 17:46:10,269 | INFO     | sufficient remaining disk space (73480011776 B)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,269 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,270 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6826326103: 4282505 B (within 2537553920 B limit)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,270 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6826326103/HITS.46373048._076930.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,270 | INFO     | total size of present files: 0 B (workdir size: 4282505 B)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,270 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6826326103/HITS.46373048._076930.pool.root.1 since it does not exist
[2025-10-09 13:46:44] 2025-10-09 17:46:10,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 13:46:44] 2025-10-09 17:46:10,327 | INFO     | job 6826326103 has completed (purged errors)
[2025-10-09 13:46:44] 2025-10-09 17:46:10,327 | INFO     | overall cleanup function is called
[2025-10-09 13:46:44] 2025-10-09 17:46:11,086 | INFO     | number of running child processes to parent process 1316868: 1
[2025-10-09 13:46:44] 2025-10-09 17:46:11,086 | INFO     | maximum number of monitored processes: 6
[2025-10-09 13:46:44] 2025-10-09 17:46:11,086 | INFO     | aborting job monitoring since job object (job id=6826326103) has expired
[2025-10-09 13:46:44] 2025-10-09 17:46:11,345 | INFO     | --- collectZombieJob: --- 10, [1316868]
[2025-10-09 13:46:44] 2025-10-09 17:46:11,345 | INFO     | zombie collector waiting for pid 1316868
[2025-10-09 13:46:44] 2025-10-09 17:46:11,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 13:46:44] 2025-10-09 17:46:11,346 | INFO     | collected zombie processes
[2025-10-09 13:46:44] 2025-10-09 17:46:11,346 | INFO     | will attempt to kill all subprocesses of pid=1316868
[2025-10-09 13:46:44] 2025-10-09 17:46:12,339 | INFO     | process IDs to be killed: [1316868] (in reverse order)
[2025-10-09 13:46:44] 2025-10-09 17:46:12,631 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 13:46:44] 2025-10-09 17:46:12,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 13:46:44] 2025-10-09 17:46:12,662 | INFO     | did not find any defunct processes belonging to 1316868
[2025-10-09 13:46:44] 2025-10-09 17:46:12,701 | INFO     | did not find any defunct processes belonging to 1316868
[2025-10-09 13:46:44] 2025-10-09 17:46:12,701 | INFO     | ready for new job
[2025-10-09 13:46:44] 2025-10-09 17:46:12,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 13:46:44] 2025-10-09 17:46:12,703 | INFO     | ***************************************
[2025-10-09 13:46:44] 2025-10-09 17:46:12,703 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 13:46:44] 2025-10-09 17:46:12,703 | INFO     | ***************************************
[2025-10-09 13:46:44] 2025-10-09 17:46:12,703 | INFO     | 
[2025-10-09 13:46:44] 2025-10-09 17:46:12,761 | INFO     | architecture information:
[2025-10-09 13:46:44] 2025-10-09 17:46:12,761 | INFO     | executing command: cat /etc/os-release
[2025-10-09 13:46:44] 2025-10-09 17:46:12,845 | INFO     | cat /etc/os-release:
[2025-10-09 13:46:44] NAME="CentOS Linux"
[2025-10-09 13:46:44] VERSION="7 (Core)"
[2025-10-09 13:46:44] ID="centos"
[2025-10-09 13:46:44] ID_LIKE="rhel fedora"
[2025-10-09 13:46:44] VERSION_ID="7"
[2025-10-09 13:46:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 13:46:44] ANSI_COLOR="0;31"
[2025-10-09 13:46:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 13:46:44] HOME_URL="https://www.centos.org/"
[2025-10-09 13:46:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 13:46:44] 
[2025-10-09 13:46:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 13:46:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 13:46:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 13:46:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 13:46:44] 
[2025-10-09 13:46:44] 2025-10-09 17:46:12,846 | INFO     | ***************************************
[2025-10-09 13:46:44] 2025-10-09 17:46:13,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-09 13:46:44] 2025-10-09 17:46:13,411 | INFO     | sufficient remaining disk space (73485254656 B)
[2025-10-09 13:46:44] 2025-10-09 17:46:13,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 13:46:44] 2025-10-09 17:46:13,412 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 13:46:44] 2025-10-09 17:46:13,412 | INFO     | update_server=False
[2025-10-09 13:46:44] 2025-10-09 17:46:13,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 13:46:44] 2025-10-09 17:46:13,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 13:46:44] 2025-10-09 17:46:13,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 13:46:44] 2025-10-09 17:46:13,601 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 13:46:44] 2025-10-09 17:46:13,601 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 13:46:44] 2025-10-09 17:46:13,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 13:46:44] 2025-10-09 17:46:13,602 | INFO     | will abort loop
[2025-10-09 13:46:44] 2025-10-09 17:46:13,817 | INFO     | all payload control threads have been joined
[2025-10-09 13:46:44] 2025-10-09 17:46:14,033 | INFO     | all data control threads have been joined
[2025-10-09 13:46:44] 2025-10-09 17:46:14,418 | INFO     | [job] retrieve thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:14,425 | INFO     | all job control threads have been joined
[2025-10-09 13:46:44] 2025-10-09 17:46:14,498 | INFO     | [payload] validate_post thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:14,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:14,606 | INFO     | [job] job monitor thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:14,823 | INFO     | [payload] control thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:14,846 | INFO     | [payload] failed_post thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:14,848 | INFO     | [job] validate thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:14,895 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:15,038 | INFO     | [data] control thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:15,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 13:46:44] 2025-10-09 17:46:15,351 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:15,421 | INFO     | [data] copytool_out thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:15,431 | INFO     | [job] control thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:15,456 | INFO     | [data] copytool_in thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:15,658 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:15,820 | INFO     | [monitor] cgroup control has ended
[2025-10-09 13:46:44] 2025-10-09 17:46:16,266 | INFO     | [job] queue monitor thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:17,425 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 13:46:44] 2025-10-09 17:46:19,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511193564992)>', '<ExcThread(monitor, started 140510844933888)>']
[2025-10-09 13:46:44] 2025-10-09 17:46:24,304 | INFO     | all workflow threads have been joined
[2025-10-09 13:46:44] 2025-10-09 17:46:24,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 13:46:44] 2025-10-09 17:46:24,305 | INFO     | traces error code: 0
[2025-10-09 13:46:44] 2025-10-09 17:46:24,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 13:46:44] 2025-10-09 17:46:43,723 | INFO     | PID=1293774 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 13:46:44] 2025-10-09 17:46:43,724 | INFO     | .. there are 37 such processes running
[2025-10-09 13:46:44] 2025-10-09 17:46:43,724 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 13:46:44] 2025-10-09 17:46:43,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 13:46:44] 2025-10-09 17:46:43,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 13:46:44] 2025-10-09 17:46:43,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 13:46:44] 2025-10-09 17:46:43,725 | CRITICAL | thread 'MainThread' is not alive
[2025-10-09 13:46:44] 2025-10-09 17:46:43,725 | INFO     | [monitor] control thread has ended
[2025-10-09 13:46:44] 2025-10-09 17:46:43,959 [wrapper] ==== pilot stdout END ====
[2025-10-09 13:46:44] 2025-10-09 17:46:43,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 13:46:44] 2025-10-09 17:46:43,964 [wrapper] pilotpid: 1293774
[2025-10-09 13:46:44] 2025-10-09 17:46:43,966 [wrapper] Pilot exit status: 0
[2025-10-09 13:46:44] 2025-10-09 17:46:44,014 [wrapper] pandaids: 6826326103
[2025-10-09 13:46:44] 2025-10-09 17:46:44,240 [wrapper] cleanup supervisor_pilot 2055807 1293776
[2025-10-09 13:46:44] 2025-10-09 17:46:44,247 [wrapper] Test setup, not cleaning
[2025-10-09 13:46:44] 2025-10-09 17:46:44,281 [wrapper] apfmon messages muted
[2025-10-09 13:46:44] 2025-10-09 17:46:44,284 [wrapper] ==== wrapper stdout END ====
[2025-10-09 13:46:44] 2025-10-09 17:46:44,291 [wrapper] ==== wrapper stderr END ====
[2025-10-09 13:46:44]  *** Error codes and diagnostics ***
[2025-10-09 13:46:44]     "exeErrorCode": 0,
[2025-10-09 13:46:44]     "exeErrorDiag": "",
[2025-10-09 13:46:44]     "pilotErrorCode": 0,
[2025-10-09 13:46:44]     "pilotErrorDiag": "",
[2025-10-09 13:46:44]  *** Listing of results directory ***
[2025-10-09 13:46:44] total 410852
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas    552446 Sep 30 23:43 pilot3.tar.gz
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas      5112 Oct  1 00:15 queuedata.json
[2025-10-09 13:46:44] -rwx------. 1 boincer umatlas     36292 Oct  1 00:18 runpilot2-wrapper.sh
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas       100 Oct  9 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 13:46:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 11:48 run_atlas
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas       105 Oct  9 11:48 job.xml
[2025-10-09 13:46:44] -rw-r--r--. 2 boincer umatlas 219935612 Oct  9 11:48 EVNT.46373045._002567.pool.root.1
[2025-10-09 13:46:44] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 11:48 start_atlas.sh
[2025-10-09 13:46:44] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 11:48 shared
[2025-10-09 13:46:44] -rw-r--r--. 2 boincer umatlas    565610 Oct  9 11:48 input.tar.gz
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas         0 Oct  9 11:48 boinc_lockfile
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas      2538 Oct  9 11:48 pandaJob.out
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas    975462 Oct  9 11:49 agis_schedconf.cvmfs.json
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas   1560401 Oct  9 11:49 agis_ddmendpoints.agis.ALL.json
[2025-10-09 13:46:44] drwx------. 4 boincer umatlas      4096 Oct  9 11:49 pilot3
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas      6934 Oct  9 13:39 init_data.xml
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas 194243380 Oct  9 13:45 HITS.46373048._076930.pool.root.1
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas       529 Oct  9 13:45 boinc_task_state.xml
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas      1042 Oct  9 13:45 memory_monitor_summary.json
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas    386296 Oct  9 13:45 log.46373048._076930.job.log.tgz.1
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas      7783 Oct  9 13:46 heartbeat.json
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 13:46 boinc_mmap_file
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas        27 Oct  9 13:46 wrapper_checkpoint.txt
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas       893 Oct  9 13:46 pilotlog.txt
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas        95 Oct  9 13:46 pilot_heartbeat.json
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas    934780 Oct  9 13:46 log.46373048._076930.job.log.1
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas       357 Oct  9 13:46 output.list
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas       620 Oct  9 13:46 runtime_log
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas   1341440 Oct  9 13:46 result.tar.gz
[2025-10-09 13:46:44] -rw-------. 1 boincer umatlas       654 Oct  9 13:46 vtqKDmxT3N8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm43ANDm3Ol2Xo.diag
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas      8698 Oct  9 13:46 runtime_log.err
[2025-10-09 13:46:44] -rw-r--r--. 1 boincer umatlas     21469 Oct  9 13:46 stderr.txt
[2025-10-09 13:46:45] HITS file was successfully produced:
[2025-10-09 13:46:45] -rw-------. 1 boincer umatlas 194243380 Oct  9 13:45 shared/HITS.pool.root.1
[2025-10-09 13:46:45]  *** Contents of shared directory: ***
[2025-10-09 13:46:45] total 406368
[2025-10-09 13:46:45] -rw-r--r--. 2 boincer umatlas 219935612 Oct  9 11:48 ATLAS.root_0
[2025-10-09 13:46:45] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 11:48 start_atlas.sh
[2025-10-09 13:46:45] -rw-r--r--. 2 boincer umatlas    565610 Oct  9 11:48 input.tar.gz
[2025-10-09 13:46:45] -rw-------. 1 boincer umatlas 194243380 Oct  9 13:45 HITS.pool.root.1
[2025-10-09 13:46:45] -rw-------. 1 boincer umatlas   1341440 Oct  9 13:46 result.tar.gz
13:46:47 (1282560): run_atlas exited; CPU time 39368.319197
13:46:47 (1282560): called boinc_finish(0)

</stderr_txt>
]]>

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