Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:39:27 (21674): wrapper (7.7.26015): starting
11:39:27 (21674): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 11:39:27] Arguments: --nthreads 12
[2025-10-09 11:39:27] Threads: 12
[2025-10-09 11:39:27] Checking for CVMFS
[2025-10-09 11:39:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 11:39:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 11:39:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 11:39:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 11:39:27] 2.11.2.0 2933 218753 100560 151513 2 188 11138510 20275201 1 130560 2 103010096 99.983 12945470 12361 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 11:39:27] CVMFS is ok
[2025-10-09 11:39:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 11:39:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 11:39:27] Further information can be found at the LHC@home message board.
[2025-10-09 11:39:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 11:39:27] Checking for apptainer binary...
[2025-10-09 11:39:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 11:39:27] Running /usr/bin/apptainer --version
[2025-10-09 11:39:27] apptainer version 1.3.2-1.el7
[2025-10-09 11:39:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 11:39:29] c-205-15.aglt2.org
[2025-10-09 11:39:29] apptainer works
[2025-10-09 11:39:29] Set ATHENA_PROC_NUMBER=12
[2025-10-09 11:39:29] Set ATHENA_CORE_NUMBER=12
[2025-10-09 11:39:29] Starting ATLAS job with PandaID=6837332662
[2025-10-09 11:39:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 12:51:56]  *** The last 200 lines of the pilot log: ***
[2025-10-09 12:51:56]  scope=mc23_13p6TeV
[2025-10-09 12:51:56]  status=None
[2025-10-09 12:51:56]  status_code=0
[2025-10-09 12:51:56]  storage_token=
[2025-10-09 12:51:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837332662/log.46676269._015284.job.log.tgz.1
[2025-10-09 12:51:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/83/log.46676269._015284.job.log.tgz.1
[2025-10-09 12:51:56]  workdir=None
[2025-10-09 12:51:56] ]
[2025-10-09 12:51:56] 2025-10-09 16:51:00,055 | INFO     | transferring file log.46676269._015284.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837332662/log.46676269._015284.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 12:51:56] 2025-10-09 16:51:00,055 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837332662/log.46676269._015284.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._015284.job
[2025-10-09 12:51:56] 2025-10-09 16:51:00,077 | INFO     | adding to output.list: log.46676269._015284.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/83/log.46676269._015284.job.log.tg
[2025-10-09 12:51:56] 2025-10-09 16:51:00,078 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 12:51:56] 2025-10-09 16:51:00,078 | INFO     | summary of transferred files:
[2025-10-09 12:51:56] 2025-10-09 16:51:00,079 | INFO     |  -- lfn=log.46676269._015284.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 12:51:56] 2025-10-09 16:51:00,079 | INFO     | stage-out finished correctly
[2025-10-09 12:51:56] 2025-10-09 16:51:00,498 | INFO     | time since job start (4276s) is within the limit (172800.0s)
[2025-10-09 12:51:56] 2025-10-09 16:51:01,324 | INFO     | monitor loop #318: job 0:6837332662 is in state 'finished'
[2025-10-09 12:51:56] 2025-10-09 16:51:01,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 12:51:56] 2025-10-09 16:51:01,904 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 12:51:56] 2025-10-09 16:51:02,333 | INFO     | job 6837332662 has state=finished
[2025-10-09 12:51:56] 2025-10-09 16:51:02,333 | INFO     | preparing for final server update for job 6837332662 in state='finished'
[2025-10-09 12:51:56] 2025-10-09 16:51:02,390 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-09 12:51:56] 2025-10-09 16:51:02,391 | INFO     | this job has now completed (state=finished)
[2025-10-09 12:51:56] 2025-10-09 16:51:02,391 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 12:51:56] 2025-10-09 16:51:02,391 | INFO     | log transfer has been attempted: DONE
[2025-10-09 12:51:56] 2025-10-09 16:51:02,391 | INFO     | job 6837332662 has finished - writing final server update
[2025-10-09 12:51:56] 2025-10-09 16:51:02,391 | INFO     | total number of processed events: 400 (read)
[2025-10-09 12:51:56] 2025-10-09 16:51:02,392 | INFO     | executing command: lscpu
[2025-10-09 12:51:56] 2025-10-09 16:51:02,417 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 12:51:56] 2025-10-09 16:51:02,504 | INFO     | time since job start (4278s) is within the limit (172800.0s)
[2025-10-09 12:51:56] 2025-10-09 16:51:03,827 | INFO     | monitor loop #319: job 0:6837332662 is in state 'finished'
[2025-10-09 12:51:56] 2025-10-09 16:51:03,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 12:51:56] 2025-10-09 16:51:04,510 | INFO     | time since job start (4280s) is within the limit (172800.0s)
[2025-10-09 12:51:56] 2025-10-09 16:51:05,631 | INFO     | PID=25348 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 12:51:56] 2025-10-09 16:51:06,330 | INFO     | monitor loop #320: job 0:6837332662 is in state 'finished'
[2025-10-09 12:51:56] 2025-10-09 16:51:06,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 12:51:56] 2025-10-09 16:51:06,631 | INFO     | time since job start (4282s) is within the limit (172800.0s)
[2025-10-09 12:51:56] 2025-10-09 16:51:07,116 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 12:51:56] 2025-10-09 16:51:07,120 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-10-09 12:51:56] 2025-10-09 16:51:07,123 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837332662/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 12:51:56] 2025-10-09 16:51:07,123 | INFO     | extracted standard info from prmon json
[2025-10-09 12:51:56] 2025-10-09 16:51:07,123 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 12:51:56] 2025-10-09 16:51:07,124 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 12:51:56] 2025-10-09 16:51:07,124 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 12:51:56] 2025-10-09 16:51:07,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 12:51:56] 2025-10-09 16:51:07,126 | INFO     | fitting pss+swap vs Time
[2025-10-09 12:51:56] 2025-10-09 16:51:07,126 | INFO     | sum of square deviations: 77515872.0
[2025-10-09 12:51:56] 2025-10-09 16:51:07,126 | INFO     | sum of deviations: 1608564144.0
[2025-10-09 12:51:56] 2025-10-09 16:51:07,127 | INFO     | mean x: 1760026609.0
[2025-10-09 12:51:56] 2025-10-09 16:51:07,127 | INFO     | mean y: 2958929.4444444445
[2025-10-09 12:51:56] 2025-10-09 16:51:07,127 | INFO     | -- intersect: -36520086257.00857
[2025-10-09 12:51:56] 2025-10-09 16:51:07,127 | INFO     | intersect: -36520086257.00857
[2025-10-09 12:51:56] 2025-10-09 16:51:07,127 | INFO     | chi2: 0.008918867689131669
[2025-10-09 12:51:56] 2025-10-09 16:51:07,127 | INFO     | -- intersect: -36520086257.00857
[2025-10-09 12:51:56] 2025-10-09 16:51:07,127 | INFO     | current memory leak: 20.75 B/s (using 63 data points, chi2=0.01)
[2025-10-09 12:51:56] 2025-10-09 16:51:07,128 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-09 12:51:56] 2025-10-09 16:51:07,128 | INFO     | ..............................
[2025-10-09 12:51:56] 2025-10-09 16:51:07,128 | INFO     | . Timing measurements:
[2025-10-09 12:51:56] 2025-10-09 16:51:07,128 | INFO     | . get job = 0 s
[2025-10-09 12:51:56] 2025-10-09 16:51:07,128 | INFO     | . initial setup = 2 s
[2025-10-09 12:51:56] 2025-10-09 16:51:07,128 | INFO     | . payload setup = 7 s
[2025-10-09 12:51:56] 2025-10-09 16:51:07,128 | INFO     | . stage-in = 0 s
[2025-10-09 12:51:56] 2025-10-09 16:51:07,129 | INFO     | . payload execution = 4248 s
[2025-10-09 12:51:56] 2025-10-09 16:51:07,129 | INFO     | . stage-out = 0 s
[2025-10-09 12:51:56] 2025-10-09 16:51:07,129 | INFO     | . log creation = 0 s
[2025-10-09 12:51:56] 2025-10-09 16:51:07,129 | INFO     | ..............................
[2025-10-09 12:51:56] 2025-10-09 16:51:07,210 | INFO     | 
[2025-10-09 12:51:56] 2025-10-09 16:51:07,211 | INFO     | job summary report
[2025-10-09 12:51:56] 2025-10-09 16:51:07,211 | INFO     | --------------------------------------------------
[2025-10-09 12:51:56] 2025-10-09 16:51:07,211 | INFO     | PanDA job id: 6837332662
[2025-10-09 12:51:56] 2025-10-09 16:51:07,211 | INFO     | task id: 46676269
[2025-10-09 12:51:56] 2025-10-09 16:51:07,211 | INFO     | errors: (none)
[2025-10-09 12:51:56] 2025-10-09 16:51:07,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 12:51:56] 2025-10-09 16:51:07,212 | INFO     | pilot state: finished 
[2025-10-09 12:51:56] 2025-10-09 16:51:07,212 | INFO     | transexitcode: 0
[2025-10-09 12:51:56] 2025-10-09 16:51:07,212 | INFO     | exeerrorcode: 0
[2025-10-09 12:51:56] 2025-10-09 16:51:07,212 | INFO     | exeerrordiag: 
[2025-10-09 12:51:56] 2025-10-09 16:51:07,212 | INFO     | exitcode: 0
[2025-10-09 12:51:56] 2025-10-09 16:51:07,212 | INFO     | exitmsg: OK
[2025-10-09 12:51:56] 2025-10-09 16:51:07,213 | INFO     | cpuconsumptiontime: 45557 s
[2025-10-09 12:51:56] 2025-10-09 16:51:07,213 | INFO     | nevents: 400
[2025-10-09 12:51:56] 2025-10-09 16:51:07,213 | INFO     | neventsw: 0
[2025-10-09 12:51:56] 2025-10-09 16:51:07,213 | INFO     | pid: 31839
[2025-10-09 12:51:56] 2025-10-09 16:51:07,213 | INFO     | pgrp: 31839
[2025-10-09 12:51:56] 2025-10-09 16:51:07,213 | INFO     | corecount: 12
[2025-10-09 12:51:56] 2025-10-09 16:51:07,214 | INFO     | event service: False
[2025-10-09 12:51:56] 2025-10-09 16:51:07,214 | INFO     | sizes: {0: 2348027, 1: 2348883, 6: 2349145, 12: 2349173, 4259: 2375193, 4260: 2384191, 4262: 2384375, 4267: 2384569}
[2025-10-09 12:51:56] 2025-10-09 16:51:07,214 | INFO     | --------------------------------------------------
[2025-10-09 12:51:56] 2025-10-09 16:51:07,214 | INFO     | 
[2025-10-09 12:51:56] 2025-10-09 16:51:07,214 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 12:51:56] 2025-10-09 16:51:07,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,238 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 12:51:56] 2025-10-09 16:51:07,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 12:51:56] 2025-10-09 16:51:07,241 | INFO     | job 6837332662 has completed (purged errors)
[2025-10-09 12:51:56] 2025-10-09 16:51:07,242 | INFO     | overall cleanup function is called
[2025-10-09 12:51:56] 2025-10-09 16:51:08,250 | INFO     | --- collectZombieJob: --- 10, [31839]
[2025-10-09 12:51:56] 2025-10-09 16:51:08,250 | INFO     | zombie collector waiting for pid 31839
[2025-10-09 12:51:56] 2025-10-09 16:51:08,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 12:51:56] 2025-10-09 16:51:08,251 | INFO     | collected zombie processes
[2025-10-09 12:51:56] 2025-10-09 16:51:08,251 | INFO     | will attempt to kill all subprocesses of pid=31839
[2025-10-09 12:51:56] 2025-10-09 16:51:08,341 | INFO     | process IDs to be killed: [31839] (in reverse order)
[2025-10-09 12:51:56] 2025-10-09 16:51:08,394 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 12:51:56] 2025-10-09 16:51:08,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 12:51:56] 2025-10-09 16:51:08,399 | INFO     | did not find any defunct processes belonging to 31839
[2025-10-09 12:51:56] 2025-10-09 16:51:08,402 | INFO     | did not find any defunct processes belonging to 31839
[2025-10-09 12:51:56] 2025-10-09 16:51:08,403 | INFO     | ready for new job
[2025-10-09 12:51:56] 2025-10-09 16:51:08,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 12:51:56] 2025-10-09 16:51:08,404 | INFO     | ***************************************
[2025-10-09 12:51:56] 2025-10-09 16:51:08,404 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 12:51:56] 2025-10-09 16:51:08,405 | INFO     | ***************************************
[2025-10-09 12:51:56] 2025-10-09 16:51:08,405 | INFO     | 
[2025-10-09 12:51:56] 2025-10-09 16:51:08,405 | INFO     | architecture information:
[2025-10-09 12:51:56] 2025-10-09 16:51:08,406 | INFO     | executing command: cat /etc/os-release
[2025-10-09 12:51:56] 2025-10-09 16:51:08,420 | INFO     | cat /etc/os-release:
[2025-10-09 12:51:56] NAME="CentOS Linux"
[2025-10-09 12:51:56] VERSION="7 (Core)"
[2025-10-09 12:51:56] ID="centos"
[2025-10-09 12:51:56] ID_LIKE="rhel fedora"
[2025-10-09 12:51:56] VERSION_ID="7"
[2025-10-09 12:51:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 12:51:56] ANSI_COLOR="0;31"
[2025-10-09 12:51:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 12:51:56] HOME_URL="https://www.centos.org/"
[2025-10-09 12:51:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 12:51:56] 
[2025-10-09 12:51:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 12:51:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 12:51:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 12:51:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 12:51:56] 
[2025-10-09 12:51:56] 2025-10-09 16:51:08,420 | INFO     | ***************************************
[2025-10-09 12:51:56] 2025-10-09 16:51:08,923 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 12:51:56] 2025-10-09 16:51:08,939 | INFO     | sufficient remaining disk space (29364322304 B)
[2025-10-09 12:51:56] 2025-10-09 16:51:08,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 12:51:56] 2025-10-09 16:51:08,940 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 12:51:56] 2025-10-09 16:51:08,940 | INFO     | update_server=False
[2025-10-09 12:51:56] 2025-10-09 16:51:08,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 12:51:56] 2025-10-09 16:51:08,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 12:51:56] 2025-10-09 16:51:08,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 12:51:56] 2025-10-09 16:51:08,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 12:51:56] 2025-10-09 16:51:09,371 | INFO     | all payload control threads have been joined
[2025-10-09 12:51:56] 2025-10-09 16:51:09,456 | INFO     | all data control threads have been joined
[2025-10-09 12:51:56] 2025-10-09 16:51:09,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 12:51:56] 2025-10-09 16:51:09,838 | INFO     | aborting loop
[2025-10-09 12:51:56] 2025-10-09 16:51:09,903 | INFO     | all job control threads have been joined
[2025-10-09 12:51:56] 2025-10-09 16:51:09,945 | INFO     | [job] retrieve thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:09,946 | INFO     | [job] queue monitor thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,318 | INFO     | [payload] failed_post thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,377 | INFO     | [payload] control thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,459 | INFO     | [data] control thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,530 | INFO     | [job] validate thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,729 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,751 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,844 | INFO     | [job] job monitor thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,908 | INFO     | [job] control thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:10,946 | INFO     | [data] copytool_out thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:11,049 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:11,343 | INFO     | [data] copytool_in thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:11,535 | INFO     | [payload] validate_post thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:12,947 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 12:51:56] 2025-10-09 16:51:39,836 | INFO     | PID=25348 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 12:51:56] 2025-10-09 16:51:39,836 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 12:51:56] 2025-10-09 16:51:39,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 12:51:56] 2025-10-09 16:51:39,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 12:51:56] 2025-10-09 16:51:50,595 | INFO     | [monitor] cgroup control has ended
[2025-10-09 12:51:56] 2025-10-09 16:51:51,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918676379456)>', '<ExcThread(monitor, started 139918013622016)>']
[2025-10-09 12:51:56] 2025-10-09 16:51:51,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 12:51:56] 2025-10-09 16:51:51,898 | INFO     | [monitor] control thread has ended
[2025-10-09 12:51:56] 2025-10-09 16:51:56,673 | INFO     | all workflow threads have been joined
[2025-10-09 12:51:56] 2025-10-09 16:51:56,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 12:51:56] 2025-10-09 16:51:56,673 | INFO     | traces error code: 0
[2025-10-09 12:51:56] 2025-10-09 16:51:56,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 12:51:56] 2025-10-09 16:51:56,765 [wrapper] ==== pilot stdout END ====
[2025-10-09 12:51:56] 2025-10-09 16:51:56,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 12:51:56] 2025-10-09 16:51:56,773 [wrapper] pilotpid: 25348
[2025-10-09 12:51:56] 2025-10-09 16:51:56,777 [wrapper] Pilot exit status: 0
[2025-10-09 12:51:56] 2025-10-09 16:51:56,792 [wrapper] pandaids: 6837332662
[2025-10-09 12:51:56] 2025-10-09 16:51:56,841 [wrapper] cleanup supervisor_pilot 13321 25349
[2025-10-09 12:51:56] 2025-10-09 16:51:56,845 [wrapper] Test setup, not cleaning
[2025-10-09 12:51:56] 2025-10-09 16:51:56,849 [wrapper] apfmon messages muted
[2025-10-09 12:51:56] 2025-10-09 16:51:56,853 [wrapper] ==== wrapper stdout END ====
[2025-10-09 12:51:56] 2025-10-09 16:51:56,857 [wrapper] ==== wrapper stderr END ====
[2025-10-09 12:51:56]  *** Error codes and diagnostics ***
[2025-10-09 12:51:56]     "exeErrorCode": 0,
[2025-10-09 12:51:56]     "exeErrorDiag": "",
[2025-10-09 12:51:56]     "pilotErrorCode": 0,
[2025-10-09 12:51:56]     "pilotErrorDiag": "",
[2025-10-09 12:51:56]  *** Listing of results directory ***
[2025-10-09 12:51:56] total 410428
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 07:10 pilot3.tar.gz
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 07:12 queuedata.json
[2025-10-09 12:51:56] -rwx------ 1 boincer umatlas     36292 Oct  9 07:12 runpilot2-wrapper.sh
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas       100 Oct  9 11:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 12:51:56] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 11:39 run_atlas
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas       105 Oct  9 11:39 job.xml
[2025-10-09 12:51:56] -rw-r--r-- 2 boincer umatlas 219172956 Oct  9 11:39 EVNT.46676267._000629.pool.root.1
[2025-10-09 12:51:56] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 11:39 start_atlas.sh
[2025-10-09 12:51:56] drwxrwx--x 2 boincer umatlas      4096 Oct  9 11:39 shared
[2025-10-09 12:51:56] -rw-r--r-- 2 boincer umatlas    569680 Oct  9 11:39 input.tar.gz
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas         0 Oct  9 11:39 boinc_lockfile
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas      2549 Oct  9 11:39 pandaJob.out
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas    975462 Oct  9 11:39 agis_schedconf.cvmfs.json
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas   1560401 Oct  9 11:39 agis_ddmendpoints.agis.ALL.json
[2025-10-09 12:51:56] drwx------ 5 boincer umatlas      4096 Oct  9 11:39 pilot3
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas      5953 Oct  9 12:48 init_data.xml
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas 195213219 Oct  9 12:50 HITS.46676269._015284.pool.root.1
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas       529 Oct  9 12:50 boinc_task_state.xml
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas      1045 Oct  9 12:50 memory_monitor_summary.json
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas    372445 Oct  9 12:50 log.46676269._015284.job.log.tgz.1
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas      7842 Oct  9 12:51 heartbeat.json
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 12:51 boinc_mmap_file
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas        27 Oct  9 12:51 wrapper_checkpoint.txt
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas        95 Oct  9 12:51 pilot_heartbeat.json
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas      4746 Oct  9 12:51 pilotlog.txt
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas    624833 Oct  9 12:51 log.46676269._015284.job.log.1
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas       357 Oct  9 12:51 output.list
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas       620 Oct  9 12:51 runtime_log
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas   1013760 Oct  9 12:51 result.tar.gz
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas      8705 Oct  9 12:51 runtime_log.err
[2025-10-09 12:51:56] -rw------- 1 boincer umatlas       656 Oct  9 12:51 Iw4KDmTk3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9iNMDm85s5on.diag
[2025-10-09 12:51:56] -rw-r--r-- 1 boincer umatlas     22032 Oct  9 12:51 stderr.txt
[2025-10-09 12:51:57] HITS file was successfully produced:
[2025-10-09 12:51:57] -rw------- 1 boincer umatlas 195213219 Oct  9 12:50 shared/HITS.pool.root.1
[2025-10-09 12:51:57]  *** Contents of shared directory: ***
[2025-10-09 12:51:57] total 406252
[2025-10-09 12:51:57] -rw-r--r-- 2 boincer umatlas 219172956 Oct  9 11:39 ATLAS.root_0
[2025-10-09 12:51:57] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 11:39 start_atlas.sh
[2025-10-09 12:51:57] -rw-r--r-- 2 boincer umatlas    569680 Oct  9 11:39 input.tar.gz
[2025-10-09 12:51:57] -rw------- 1 boincer umatlas 195213219 Oct  9 12:50 HITS.pool.root.1
[2025-10-09 12:51:57] -rw------- 1 boincer umatlas   1013760 Oct  9 12:51 result.tar.gz
12:51:58 (21674): run_atlas exited; CPU time 45521.234711
12:51:58 (21674): called boinc_finish(0)

</stderr_txt>
]]>

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