Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
11:29:06 (1195746): wrapper (7.7.26015): starting
11:29:06 (1195746): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 11:29:06] Arguments: --nthreads 8
[2025-10-09 11:29:06] Threads: 8
[2025-10-09 11:29:06] Checking for CVMFS
[2025-10-09 11:29:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 11:29:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 11:29:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 11:29:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 11:29:06] 2.12.7.0 3856927 1357 64320 151517 1 58 3872679 4096001 923 130560 0 4212389 99.997 49634 565 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-09 11:29:06] CVMFS is ok
[2025-10-09 11:29:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 11:29:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-09 11:29:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-09 11:29:06] Further information can be found at the LHC@home message board.
[2025-10-09 11:29:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 11:29:06] Checking for apptainer binary...
[2025-10-09 11:29:06] apptainer is not installed, using version from CVMFS
[2025-10-09 11:29:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 11:29:07] painter
[2025-10-09 11:29:07] apptainer works
[2025-10-09 11:29:07] Set ATHENA_PROC_NUMBER=8
[2025-10-09 11:29:07] Set ATHENA_CORE_NUMBER=8
[2025-10-09 11:29:07] Starting ATLAS job with PandaID=6836606889
[2025-10-09 11:29:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 12:09:29]  *** The last 200 lines of the pilot log: ***
[2025-10-09 12:09:29] ]
[2025-10-09 12:09:29] 2025-10-09 18:08:42,957 | INFO     | transferring file log.46676269._011506.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6836606889/log.46676269._011506.job.log.tgz.1 to /var/lib/boinc
[2025-10-09 12:09:29] 2025-10-09 18:08:42,957 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6836606889/log.46676269._011506.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-09 12:09:29] 2025-10-09 18:08:42,973 | INFO     | adding to output.list: log.46676269._011506.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/39/log.46676269._011506.job.log.tg
[2025-10-09 12:09:29] 2025-10-09 18:08:42,973 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 12:09:29] 2025-10-09 18:08:42,973 | INFO     | summary of transferred files:
[2025-10-09 12:09:29] 2025-10-09 18:08:42,973 | INFO     |  -- lfn=log.46676269._011506.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 12:09:29] 2025-10-09 18:08:42,973 | INFO     | stage-out finished correctly
[2025-10-09 12:09:29] 2025-10-09 18:08:43,220 | INFO     | time since job start (2364s) is within the limit (172800.0s)
[2025-10-09 12:09:29] 2025-10-09 18:08:44,755 | INFO     | monitor loop #184: job 0:6836606889 is in state 'finished'
[2025-10-09 12:09:29] 2025-10-09 18:08:44,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 12:09:29] 2025-10-09 18:08:45,225 | INFO     | time since job start (2366s) is within the limit (172800.0s)
[2025-10-09 12:09:29] 2025-10-09 18:08:45,229 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 12:09:29] 2025-10-09 18:08:45,266 | INFO     | job 6836606889 has state=finished
[2025-10-09 12:09:29] 2025-10-09 18:08:45,267 | INFO     | preparing for final server update for job 6836606889 in state='finished'
[2025-10-09 12:09:29] 2025-10-09 18:08:45,267 | INFO     | this job has now completed (state=finished)
[2025-10-09 12:09:29] 2025-10-09 18:08:45,267 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 12:09:29] 2025-10-09 18:08:45,267 | INFO     | log transfer has been attempted: DONE
[2025-10-09 12:09:29] 2025-10-09 18:08:45,267 | INFO     | job 6836606889 has finished - writing final server update
[2025-10-09 12:09:29] 2025-10-09 18:08:45,267 | INFO     | total number of processed events: 400 (read)
[2025-10-09 12:09:29] 2025-10-09 18:08:45,274 | INFO     | executing command: lscpu
[2025-10-09 12:09:29] 2025-10-09 18:08:45,303 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 12:09:29] 2025-10-09 18:08:47,230 | INFO     | time since job start (2368s) is within the limit (172800.0s)
[2025-10-09 12:09:29] 2025-10-09 18:08:47,256 | INFO     | monitor loop #185: job 0:6836606889 is in state 'finished'
[2025-10-09 12:09:29] 2025-10-09 18:08:47,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 12:09:29] 2025-10-09 18:08:48,308 | INFO     | PID=1199583 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 12:09:29] 2025-10-09 18:08:48,308 | INFO     | .. there are 2 such processes running
[2025-10-09 12:09:29] 2025-10-09 18:08:49,308 | INFO     | time since job start (2370s) is within the limit (172800.0s)
[2025-10-09 12:09:29] 2025-10-09 18:08:49,759 | INFO     | monitor loop #186: job 0:6836606889 is in state 'finished'
[2025-10-09 12:09:29] 2025-10-09 18:08:49,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 12:09:29] 2025-10-09 18:08:51,313 | INFO     | time since job start (2372s) is within the limit (172800.0s)
[2025-10-09 12:09:29] 2025-10-09 18:08:52,261 | INFO     | monitor loop #187: job 0:6836606889 is in state 'finished'
[2025-10-09 12:09:29] 2025-10-09 18:08:52,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 12:09:29] 2025-10-09 18:08:52,567 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 12:09:29] 2025-10-09 18:08:52,570 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4269.3507500000005
[2025-10-09 12:09:29] 2025-10-09 18:08:52,573 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6836606889/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 12:09:29] 2025-10-09 18:08:52,573 | INFO     | extracted standard info from prmon json
[2025-10-09 12:09:29] 2025-10-09 18:08:52,573 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 12:09:29] 2025-10-09 18:08:52,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 12:09:29] 2025-10-09 18:08:52,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 12:09:29] 2025-10-09 18:08:52,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | fitting pss+swap vs Time
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | sum of square deviations: 10150888.0
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | sum of deviations: 133429417.5
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | mean x: 1760032229.5
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | mean y: 2578910.53125
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | -- intersect: -23132350286.14704
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | intersect: -23132350286.14704
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | chi2: 0.0002038381040733528
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | -- intersect: -23132350286.14704
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | current memory leak: 13.14 B/s (using 32 data points, chi2=0.00)
[2025-10-09 12:09:29] 2025-10-09 18:08:52,574 | INFO     | could have reported an average CPU frequency of 4423 MHz (5 samples)
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | ..............................
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | . Timing measurements:
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | . get job = 0 s
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | . initial setup = 4 s
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | . payload setup = 3 s
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | . stage-in = 0 s
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | . payload execution = 2342 s
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | . stage-out = 0 s
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | . log creation = 0 s
[2025-10-09 12:09:29] 2025-10-09 18:08:52,575 | INFO     | ..............................
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | 
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | job summary report
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | --------------------------------------------------
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | PanDA job id: 6836606889
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | task id: 46676269
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | errors: (none)
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | pilot state: finished 
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | transexitcode: 0
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | exeerrorcode: 0
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | exeerrordiag: 
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | exitcode: 0
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | exitmsg: OK
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | cpuconsumptiontime: 17357 s
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | nevents: 400
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | neventsw: 0
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | pid: 1206232
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | pgrp: 1206232
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | corecount: 8
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | event service: False
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | sizes: {0: 2348862, 3: 2349124, 11: 2349152, 2350: 2374350, 2351: 2383362, 2353: 2383418, 2360: 2383772}
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | --------------------------------------------------
[2025-10-09 12:09:29] 2025-10-09 18:08:52,894 | INFO     | 
[2025-10-09 12:09:29] 2025-10-09 18:08:52,895 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-09 12:09:29] 2025-10-09 18:08:52,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | job 6836606889 has completed (purged errors)
[2025-10-09 12:09:29] 2025-10-09 18:08:52,922 | INFO     | overall cleanup function is called
[2025-10-09 12:09:29] 2025-10-09 18:08:53,929 | INFO     | --- collectZombieJob: --- 10, [1206232]
[2025-10-09 12:09:29] 2025-10-09 18:08:53,929 | INFO     | zombie collector waiting for pid 1206232
[2025-10-09 12:09:29] 2025-10-09 18:08:53,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 12:09:29] 2025-10-09 18:08:53,929 | INFO     | collected zombie processes
[2025-10-09 12:09:29] 2025-10-09 18:08:53,929 | INFO     | will attempt to kill all subprocesses of pid=1206232
[2025-10-09 12:09:29] 2025-10-09 18:08:53,994 | INFO     | process IDs to be killed: [1206232] (in reverse order)
[2025-10-09 12:09:29] 2025-10-09 18:08:54,053 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 12:09:29] 2025-10-09 18:08:54,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 12:09:29] 2025-10-09 18:08:54,056 | INFO     | did not find any defunct processes belonging to 1206232
[2025-10-09 12:09:29] 2025-10-09 18:08:54,058 | INFO     | did not find any defunct processes belonging to 1206232
[2025-10-09 12:09:29] 2025-10-09 18:08:54,058 | INFO     | ready for new job
[2025-10-09 12:09:29] 2025-10-09 18:08:54,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 12:09:29] 2025-10-09 18:08:54,059 | INFO     | ***************************************
[2025-10-09 12:09:29] 2025-10-09 18:08:54,059 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 12:09:29] 2025-10-09 18:08:54,059 | INFO     | ***************************************
[2025-10-09 12:09:29] 2025-10-09 18:08:54,059 | INFO     | 
[2025-10-09 12:09:29] 2025-10-09 18:08:54,060 | INFO     | architecture information:
[2025-10-09 12:09:29] 2025-10-09 18:08:54,060 | INFO     | executing command: cat /etc/os-release
[2025-10-09 12:09:29] 2025-10-09 18:08:54,073 | INFO     | cat /etc/os-release:
[2025-10-09 12:09:29] NAME="CentOS Linux"
[2025-10-09 12:09:29] VERSION="7 (Core)"
[2025-10-09 12:09:29] ID="centos"
[2025-10-09 12:09:29] ID_LIKE="rhel fedora"
[2025-10-09 12:09:29] VERSION_ID="7"
[2025-10-09 12:09:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 12:09:29] ANSI_COLOR="0;31"
[2025-10-09 12:09:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 12:09:29] HOME_URL="https://www.centos.org/"
[2025-10-09 12:09:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 12:09:29] 
[2025-10-09 12:09:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 12:09:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 12:09:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 12:09:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 12:09:29] 
[2025-10-09 12:09:29] 2025-10-09 18:08:54,073 | INFO     | ***************************************
[2025-10-09 12:09:29] 2025-10-09 18:08:54,575 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-09 12:09:29] 2025-10-09 18:08:54,593 | INFO     | sufficient remaining disk space (189230219264 B)
[2025-10-09 12:09:29] 2025-10-09 18:08:54,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 12:09:29] 2025-10-09 18:08:54,593 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 12:09:29] 2025-10-09 18:08:54,593 | INFO     | update_server=False
[2025-10-09 12:09:29] 2025-10-09 18:08:54,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 12:09:29] 2025-10-09 18:08:54,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 12:09:29] 2025-10-09 18:08:54,683 | INFO     | all job control threads have been joined
[2025-10-09 12:09:29] 2025-10-09 18:08:54,763 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 12:09:29] 2025-10-09 18:08:54,763 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 12:09:29] 2025-10-09 18:08:54,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 12:09:29] 2025-10-09 18:08:54,763 | INFO     | will abort loop
[2025-10-09 12:09:29] 2025-10-09 18:08:54,840 | INFO     | all payload control threads have been joined
[2025-10-09 12:09:29] 2025-10-09 18:08:55,541 | INFO     | all data control threads have been joined
[2025-10-09 12:09:29] 2025-10-09 18:08:55,598 | INFO     | [job] retrieve thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:55,601 | INFO     | [job] queue monitor thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:55,688 | INFO     | [job] control thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:55,709 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:55,750 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:55,757 | INFO     | [payload] failed_post thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:55,768 | INFO     | [job] job monitor thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:55,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 12:09:29] 2025-10-09 18:08:55,845 | INFO     | [payload] control thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:56,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 12:09:29] 2025-10-09 18:08:56,043 | INFO     | [data] copytool_in thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:56,245 | INFO     | [payload] validate_post thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:56,546 | INFO     | [data] control thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:56,859 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:57,056 | INFO     | [job] validate thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:58,034 | INFO     | [data] copytool_out thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:08:59,779 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:09:05,070 | INFO     | job.realtimelogging is not enabled
[2025-10-09 12:09:29] 2025-10-09 18:09:06,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 12:09:29] 2025-10-09 18:09:22,589 | INFO     | [monitor] cgroup control has ended
[2025-10-09 12:09:29] 2025-10-09 18:09:24,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128276933211968)>', '<ExcThread(monitor, started 128276391528192)>']
[2025-10-09 12:09:29] 2025-10-09 18:09:24,449 | INFO     | PID=1199583 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 12:09:29] 2025-10-09 18:09:24,449 | INFO     | .. there are 2 such processes running
[2025-10-09 12:09:29] 2025-10-09 18:09:24,449 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 12:09:29] 2025-10-09 18:09:24,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 12:09:29] 2025-10-09 18:09:24,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 12:09:29] 2025-10-09 18:09:24,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 12:09:29] 2025-10-09 18:09:24,449 | INFO     | [monitor] control thread has ended
[2025-10-09 12:09:29] 2025-10-09 18:09:29,127 | INFO     | all workflow threads have been joined
[2025-10-09 12:09:29] 2025-10-09 18:09:29,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 12:09:29] 2025-10-09 18:09:29,127 | INFO     | traces error code: 0
[2025-10-09 12:09:29] 2025-10-09 18:09:29,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 12:09:29] 2025-10-09 18:09:29,179 [wrapper] ==== pilot stdout END ====
[2025-10-09 12:09:29] 2025-10-09 18:09:29,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 12:09:29] 2025-10-09 18:09:29,183 [wrapper] pilotpid: 1199583
[2025-10-09 12:09:29] 2025-10-09 18:09:29,184 [wrapper] Pilot exit status: 0
[2025-10-09 12:09:29] 2025-10-09 18:09:29,192 [wrapper] pandaids: 6836606889
[2025-10-09 12:09:29] 2025-10-09 18:09:29,218 [wrapper] cleanup supervisor_pilot 1232687 1199584
[2025-10-09 12:09:29] 2025-10-09 18:09:29,221 [wrapper] Test setup, not cleaning
[2025-10-09 12:09:29] 2025-10-09 18:09:29,224 [wrapper] apfmon messages muted
[2025-10-09 12:09:29] 2025-10-09 18:09:29,227 [wrapper] ==== wrapper stdout END ====
[2025-10-09 12:09:29] 2025-10-09 18:09:29,229 [wrapper] ==== wrapper stderr END ====
[2025-10-09 12:09:29]  *** Error codes and diagnostics ***
[2025-10-09 12:09:29]     "exeErrorCode": 0,
[2025-10-09 12:09:29]     "exeErrorDiag": "",
[2025-10-09 12:09:29]     "pilotErrorCode": 0,
[2025-10-09 12:09:29]     "pilotErrorDiag": "",
[2025-10-09 12:09:29]  *** Listing of results directory ***
[2025-10-09 12:09:29] total 419680
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc    557409 Oct  8 17:22 pilot3.tar.gz
[2025-10-09 12:09:29] -rwx------ 1 boinc boinc     36292 Oct  8 17:47 runpilot2-wrapper.sh
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc      5112 Oct  8 17:47 queuedata.json
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc       100 Oct  9 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 12:09:29] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 11:29 run_atlas
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc       105 Oct  9 11:29 job.xml
[2025-10-09 12:09:29] -rw-r--r-- 2 boinc boinc 223186655 Oct  9 11:29 EVNT.46676267._000470.pool.root.1
[2025-10-09 12:09:29] -rw-r--r-- 2 boinc boinc     15120 Oct  9 11:29 start_atlas.sh
[2025-10-09 12:09:29] drwxrwx--x 2 boinc boinc      4096 Oct  9 11:29 shared
[2025-10-09 12:09:29] -rw-r--r-- 2 boinc boinc    569678 Oct  9 11:29 input.tar.gz
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc      9979 Oct  9 11:29 init_data.xml
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc         0 Oct  9 11:29 boinc_lockfile
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc      2549 Oct  9 11:29 pandaJob.out
[2025-10-09 12:09:29] -rw------- 1 boinc boinc    975446 Oct  9 11:29 agis_schedconf.cvmfs.json
[2025-10-09 12:09:29] -rw------- 1 boinc boinc   1560401 Oct  9 11:29 agis_ddmendpoints.agis.ALL.json
[2025-10-09 12:09:29] drwx------ 5 boinc boinc      4096 Oct  9 11:29 pilot3
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc       530 Oct  9 12:08 boinc_task_state.xml
[2025-10-09 12:09:29] -rw------- 1 boinc boinc 201302157 Oct  9 12:08 HITS.46676269._011506.pool.root.1
[2025-10-09 12:09:29] -rw------- 1 boinc boinc        95 Oct  9 12:08 pilot_heartbeat.json
[2025-10-09 12:09:29] -rw------- 1 boinc boinc      1022 Oct  9 12:08 memory_monitor_summary.json
[2025-10-09 12:09:29] -rw------- 1 boinc boinc    291621 Oct  9 12:08 log.46676269._011506.job.log.tgz.1
[2025-10-09 12:09:29] -rw------- 1 boinc boinc      7737 Oct  9 12:08 heartbeat.json
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc      8192 Oct  9 12:09 boinc_mmap_file
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc        27 Oct  9 12:09 wrapper_checkpoint.txt
[2025-10-09 12:09:29] -rw------- 1 boinc boinc      5089 Oct  9 12:09 pilotlog.txt
[2025-10-09 12:09:29] -rw------- 1 boinc boinc    385964 Oct  9 12:09 log.46676269._011506.job.log.1
[2025-10-09 12:09:29] -rw------- 1 boinc boinc       357 Oct  9 12:09 output.list
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc       620 Oct  9 12:09 runtime_log
[2025-10-09 12:09:29] -rw------- 1 boinc boinc    696320 Oct  9 12:09 result.tar.gz
[2025-10-09 12:09:29] -rw------- 1 boinc boinc       654 Oct  9 12:09 zYzLDmU3sQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJxYNDmRRd7Fm.diag
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc      8794 Oct  9 12:09 runtime_log.err
[2025-10-09 12:09:29] -rw-r--r-- 1 boinc boinc     22490 Oct  9 12:09 stderr.txt
[2025-10-09 12:09:29] HITS file was successfully produced:
[2025-10-09 12:09:29] -rw------- 1 boinc boinc 201302157 Oct  9 12:08 shared/HITS.pool.root.1
[2025-10-09 12:09:29]  *** Contents of shared directory: ***
[2025-10-09 12:09:29] total 415808
[2025-10-09 12:09:29] -rw-r--r-- 2 boinc boinc 223186655 Oct  9 11:29 ATLAS.root_0
[2025-10-09 12:09:29] -rw-r--r-- 2 boinc boinc     15120 Oct  9 11:29 start_atlas.sh
[2025-10-09 12:09:29] -rw-r--r-- 2 boinc boinc    569678 Oct  9 11:29 input.tar.gz
[2025-10-09 12:09:29] -rw------- 1 boinc boinc 201302157 Oct  9 12:08 HITS.pool.root.1
[2025-10-09 12:09:29] -rw------- 1 boinc boinc    696320 Oct  9 12:09 result.tar.gz
12:09:30 (1195746): run_atlas exited; CPU time 17360.915518
12:09:30 (1195746): called boinc_finish(0)

</stderr_txt>
]]>

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