Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:48:13 (639013): wrapper (7.7.26015): starting
05:48:13 (639013): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 05:48:13] Arguments: --nthreads 12
[2025-10-10 05:48:13] Threads: 12
[2025-10-10 05:48:13] Checking for CVMFS
[2025-10-10 05:48:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 05:48:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 05:48:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 05:48:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 05:48:13] 2.13.2.0 8705 29873 121916 151533 0 188 39055115 46080001 922 130560 0 47979263 99.997 958353 786 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-10 05:48:13] CVMFS is ok
[2025-10-10 05:48:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 05:48:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 05:48:13] Further information can be found at the LHC@home message board.
[2025-10-10 05:48:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 05:48:13] Checking for apptainer binary...
[2025-10-10 05:48:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 05:48:13] Running /usr/bin/apptainer --version
[2025-10-10 05:48:13] apptainer version 1.4.2-1.el9
[2025-10-10 05:48:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 05:48:13] gpu01.farm.particle.cz
[2025-10-10 05:48:13] apptainer works
[2025-10-10 05:48:13] Set ATHENA_PROC_NUMBER=12
[2025-10-10 05:48:13] Set ATHENA_CORE_NUMBER=12
[2025-10-10 05:48:13] Starting ATLAS job with PandaID=6837333307
[2025-10-10 05:48:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 06:28:51]  *** The last 200 lines of the pilot log: ***
[2025-10-10 06:28:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 06:28:52]  replicas=None
[2025-10-10 06:28:52]  scope=mc23_13p6TeV
[2025-10-10 06:28:52]  status=None
[2025-10-10 06:28:52]  status_code=0
[2025-10-10 06:28:52]  storage_token=
[2025-10-10 06:28:52]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6837333307/log.46676269._015586.job.log.tgz.1
[2025-10-10 06:28:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/5e/log.46676269._015586.job.log.tgz.1
[2025-10-10 06:28:52]  workdir=None
[2025-10-10 06:28:52] ]
[2025-10-10 06:28:52] 2025-10-10 04:28:13,685 | INFO     | transferring file log.46676269._015586.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6837333307/log.46676269._015586.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-10 06:28:52] 2025-10-10 04:28:13,685 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6837333307/log.46676269._015586.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._015586.job
[2025-10-10 06:28:52] 2025-10-10 04:28:13,700 | INFO     | adding to output.list: log.46676269._015586.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/5e/log.46676269._015586.job.log.tg
[2025-10-10 06:28:52] 2025-10-10 04:28:13,700 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 06:28:52] 2025-10-10 04:28:13,700 | INFO     | summary of transferred files:
[2025-10-10 06:28:52] 2025-10-10 04:28:13,700 | INFO     |  -- lfn=log.46676269._015586.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 06:28:52] 2025-10-10 04:28:13,700 | INFO     | stage-out finished correctly
[2025-10-10 06:28:52] 2025-10-10 04:28:14,620 | INFO     | time since job start (2392s) is within the limit (172800.0s)
[2025-10-10 06:28:52] 2025-10-10 04:28:15,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 06:28:52] 2025-10-10 04:28:15,582 | INFO     | monitor loop #186: job 0:6837333307 is in state 'finished'
[2025-10-10 06:28:52] 2025-10-10 04:28:15,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:28:52] 2025-10-10 04:28:15,723 | INFO     | job 6837333307 has state=finished
[2025-10-10 06:28:52] 2025-10-10 04:28:15,724 | INFO     | preparing for final server update for job 6837333307 in state='finished'
[2025-10-10 06:28:52] 2025-10-10 04:28:15,724 | INFO     | this job has now completed (state=finished)
[2025-10-10 06:28:52] 2025-10-10 04:28:15,724 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 06:28:52] 2025-10-10 04:28:15,724 | INFO     | log transfer has been attempted: DONE
[2025-10-10 06:28:52] 2025-10-10 04:28:15,724 | INFO     | job 6837333307 has finished - writing final server update
[2025-10-10 06:28:52] 2025-10-10 04:28:15,725 | INFO     | total number of processed events: 400 (read)
[2025-10-10 06:28:52] 2025-10-10 04:28:15,725 | INFO     | executing command: lscpu
[2025-10-10 06:28:52] 2025-10-10 04:28:15,752 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 06:28:52] 2025-10-10 04:28:16,625 | INFO     | time since job start (2394s) is within the limit (172800.0s)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,084 | INFO     | monitor loop #187: job 0:6837333307 is in state 'finished'
[2025-10-10 06:28:52] 2025-10-10 04:28:18,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,434 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 06:28:52] 2025-10-10 04:28:18,439 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3223.5188749999998
[2025-10-10 06:28:52] 2025-10-10 04:28:18,444 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6837333307/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,445 | INFO     | extracted standard info from prmon json
[2025-10-10 06:28:52] 2025-10-10 04:28:18,445 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 06:28:52] 2025-10-10 04:28:18,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 06:28:52] 2025-10-10 04:28:18,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 06:28:52] 2025-10-10 04:28:18,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 06:28:52] 2025-10-10 04:28:18,446 | INFO     | fitting pss+swap vs Time
[2025-10-10 06:28:52] 2025-10-10 04:28:18,446 | INFO     | sum of square deviations: 10150888.0
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | sum of deviations: -1290332054.5
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | mean x: 1760069373.5
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | mean y: 2875922.53125
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | -- intersect: 223734428351.322
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | intersect: 223734428351.322
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | chi2: 0.022706780973107365
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | -- intersect: 223734428351.322
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | current memory leak: -127.12 B/s (using 32 data points, chi2=0.02)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,447 | INFO     | could have reported an average CPU frequency of 3215 MHz (5 samples)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | ..............................
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | . Timing measurements:
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | . get job = 0 s
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | . initial setup = 2 s
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | . payload setup = 3 s
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | . stage-in = 0 s
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | . payload execution = 2370 s
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | . stage-out = 0 s
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | . log creation = 0 s
[2025-10-10 06:28:52] 2025-10-10 04:28:18,448 | INFO     | ..............................
[2025-10-10 06:28:52] 2025-10-10 04:28:18,631 | INFO     | time since job start (2396s) is within the limit (172800.0s)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,978 | INFO     | 
[2025-10-10 06:28:52] 2025-10-10 04:28:18,978 | INFO     | job summary report
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | --------------------------------------------------
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | PanDA job id: 6837333307
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | task id: 46676269
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | errors: (none)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | pilot state: finished 
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | transexitcode: 0
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | exeerrorcode: 0
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | exeerrordiag: 
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | exitcode: 0
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | exitmsg: OK
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | cpuconsumptiontime: 25629 s
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | nevents: 400
[2025-10-10 06:28:52] 2025-10-10 04:28:18,979 | INFO     | neventsw: 0
[2025-10-10 06:28:52] 2025-10-10 04:28:18,980 | INFO     | pid: 650388
[2025-10-10 06:28:52] 2025-10-10 04:28:18,980 | INFO     | pgrp: 650388
[2025-10-10 06:28:52] 2025-10-10 04:28:18,980 | INFO     | corecount: 12
[2025-10-10 06:28:52] 2025-10-10 04:28:18,980 | INFO     | event service: False
[2025-10-10 06:28:52] 2025-10-10 04:28:18,980 | INFO     | sizes: {0: 2348855, 3: 2349117, 11: 2349145, 2377: 2374321, 2378: 2383319, 2379: 2383375, 2382: 2383729}
[2025-10-10 06:28:52] 2025-10-10 04:28:18,980 | INFO     | --------------------------------------------------
[2025-10-10 06:28:52] 2025-10-10 04:28:18,980 | INFO     | 
[2025-10-10 06:28:52] 2025-10-10 04:28:18,980 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-10 06:28:52] 2025-10-10 04:28:18,995 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | job 6837333307 has completed (purged errors)
[2025-10-10 06:28:52] 2025-10-10 04:28:18,997 | INFO     | overall cleanup function is called
[2025-10-10 06:28:52] 2025-10-10 04:28:20,006 | INFO     | --- collectZombieJob: --- 10, [650388]
[2025-10-10 06:28:52] 2025-10-10 04:28:20,006 | INFO     | zombie collector waiting for pid 650388
[2025-10-10 06:28:52] 2025-10-10 04:28:20,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 06:28:52] 2025-10-10 04:28:20,006 | INFO     | collected zombie processes
[2025-10-10 06:28:52] 2025-10-10 04:28:20,006 | INFO     | will attempt to kill all subprocesses of pid=650388
[2025-10-10 06:28:52] 2025-10-10 04:28:20,097 | INFO     | process IDs to be killed: [650388] (in reverse order)
[2025-10-10 06:28:52] 2025-10-10 04:28:20,137 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 06:28:52] 2025-10-10 04:28:20,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 06:28:52] 2025-10-10 04:28:20,140 | INFO     | did not find any defunct processes belonging to 650388
[2025-10-10 06:28:52] 2025-10-10 04:28:20,143 | INFO     | did not find any defunct processes belonging to 650388
[2025-10-10 06:28:52] 2025-10-10 04:28:20,143 | INFO     | ready for new job
[2025-10-10 06:28:52] 2025-10-10 04:28:20,143 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 06:28:52] 2025-10-10 04:28:20,144 | INFO     | ***************************************
[2025-10-10 06:28:52] 2025-10-10 04:28:20,144 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 06:28:52] 2025-10-10 04:28:20,144 | INFO     | ***************************************
[2025-10-10 06:28:52] 2025-10-10 04:28:20,144 | INFO     | 
[2025-10-10 06:28:52] 2025-10-10 04:28:20,145 | INFO     | architecture information:
[2025-10-10 06:28:52] 2025-10-10 04:28:20,146 | INFO     | executing command: cat /etc/os-release
[2025-10-10 06:28:52] 2025-10-10 04:28:20,157 | INFO     | cat /etc/os-release:
[2025-10-10 06:28:52] NAME="CentOS Linux"
[2025-10-10 06:28:52] VERSION="7 (Core)"
[2025-10-10 06:28:52] ID="centos"
[2025-10-10 06:28:52] ID_LIKE="rhel fedora"
[2025-10-10 06:28:52] VERSION_ID="7"
[2025-10-10 06:28:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 06:28:52] ANSI_COLOR="0;31"
[2025-10-10 06:28:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 06:28:52] HOME_URL="https://www.centos.org/"
[2025-10-10 06:28:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 06:28:52] 
[2025-10-10 06:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 06:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 06:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 06:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 06:28:52] 
[2025-10-10 06:28:52] 2025-10-10 04:28:20,158 | INFO     | ***************************************
[2025-10-10 06:28:52] 2025-10-10 04:28:20,660 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-10 06:28:52] 2025-10-10 04:28:20,673 | INFO     | sufficient remaining disk space (51556384768 B)
[2025-10-10 06:28:52] 2025-10-10 04:28:20,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 06:28:52] 2025-10-10 04:28:20,674 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 06:28:52] 2025-10-10 04:28:20,674 | INFO     | update_server=False
[2025-10-10 06:28:52] 2025-10-10 04:28:20,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 06:28:52] 2025-10-10 04:28:20,724 | INFO     | all data control threads have been joined
[2025-10-10 06:28:52] 2025-10-10 04:28:21,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 06:28:52] 2025-10-10 04:28:21,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 06:28:52] 2025-10-10 04:28:21,593 | INFO     | aborting loop
[2025-10-10 06:28:52] 2025-10-10 04:28:21,679 | INFO     | [job] retrieve thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:21,730 | INFO     | [data] control thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:21,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 06:28:52] 2025-10-10 04:28:21,802 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:21,876 | INFO     | all job control threads have been joined
[2025-10-10 06:28:52] 2025-10-10 04:28:21,976 | INFO     | all payload control threads have been joined
[2025-10-10 06:28:52] 2025-10-10 04:28:22,147 | INFO     | [payload] validate_post thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:22,443 | INFO     | [payload] failed_post thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:22,598 | INFO     | [job] job monitor thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:22,881 | INFO     | [job] control thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:22,981 | INFO     | [payload] control thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:23,017 | INFO     | [data] copytool_in thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:23,023 | INFO     | [job] validate thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:23,044 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:23,083 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:23,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 06:28:52] 2025-10-10 04:28:23,766 | INFO     | [data] copytool_out thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:24,513 | INFO     | [job] queue monitor thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:24,789 | INFO     | [monitor] cgroup control has ended
[2025-10-10 06:28:52] 2025-10-10 04:28:25,506 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:31,398 | INFO     | job.realtimelogging is not enabled
[2025-10-10 06:28:52] 2025-10-10 04:28:32,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 06:28:52] 2025-10-10 04:28:33,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731344836416)>', '<ExcThread(monitor, started 139731071375104)>']
[2025-10-10 06:28:52] 2025-10-10 04:28:38,613 | INFO     | all workflow threads have been joined
[2025-10-10 06:28:52] 2025-10-10 04:28:38,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 06:28:52] 2025-10-10 04:28:38,614 | INFO     | traces error code: 0
[2025-10-10 06:28:52] 2025-10-10 04:28:38,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 06:28:52] 2025-10-10 04:28:51,812 | INFO     | PID=643420 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 06:28:52] 2025-10-10 04:28:51,812 | INFO     | .. there are 2 such processes running
[2025-10-10 06:28:52] 2025-10-10 04:28:51,812 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 06:28:52] 2025-10-10 04:28:51,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 06:28:52] 2025-10-10 04:28:51,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 06:28:52] 2025-10-10 04:28:51,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 06:28:52] 2025-10-10 04:28:51,812 | CRITICAL | thread 'MainThread' is not alive
[2025-10-10 06:28:52] 2025-10-10 04:28:51,812 | INFO     | [monitor] control thread has ended
[2025-10-10 06:28:52] 2025-10-10 04:28:51,911 [wrapper] ==== pilot stdout END ====
[2025-10-10 06:28:52] 2025-10-10 04:28:51,913 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 06:28:52] 2025-10-10 04:28:51,915 [wrapper] pilotpid: 643420
[2025-10-10 06:28:52] 2025-10-10 04:28:51,917 [wrapper] Pilot exit status: 0
[2025-10-10 06:28:52] 2025-10-10 04:28:51,924 [wrapper] pandaids: 6837333307
[2025-10-10 06:28:52] 2025-10-10 04:28:51,950 [wrapper] cleanup supervisor_pilot  691053 643421
[2025-10-10 06:28:52] 2025-10-10 04:28:51,952 [wrapper] Test setup, not cleaning
[2025-10-10 06:28:52] 2025-10-10 04:28:51,954 [wrapper] apfmon messages muted
[2025-10-10 06:28:52] 2025-10-10 04:28:51,956 [wrapper] ==== wrapper stdout END ====
[2025-10-10 06:28:52] 2025-10-10 04:28:51,957 [wrapper] ==== wrapper stderr END ====
[2025-10-10 06:28:52]  *** Error codes and diagnostics ***
[2025-10-10 06:28:52]     "exeErrorCode": 0,
[2025-10-10 06:28:52]     "exeErrorDiag": "",
[2025-10-10 06:28:52]     "pilotErrorCode": 0,
[2025-10-10 06:28:52]     "pilotErrorDiag": "",
[2025-10-10 06:28:52]  *** Listing of results directory ***
[2025-10-10 06:28:52] total 411192
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc    557409 Oct  9 13:10 pilot3.tar.gz
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc      5112 Oct  9 13:22 queuedata.json
[2025-10-10 06:28:52] -rwx------ 1 boinc boinc     36292 Oct  9 13:22 runpilot2-wrapper.sh
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc       100 Oct 10 05:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 06:28:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 05:48 run_atlas
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc       105 Oct 10 05:48 job.xml
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc      9445 Oct 10 05:48 init_data.xml
[2025-10-10 06:28:52] -rw-r--r-- 2 boinc boinc 221128410 Oct 10 05:48 EVNT.46676267._000641.pool.root.1
[2025-10-10 06:28:52] -rw-r--r-- 2 boinc boinc     15120 Oct 10 05:48 start_atlas.sh
[2025-10-10 06:28:52] drwxrwx--x 2 boinc boinc      4096 Oct 10 05:48 shared
[2025-10-10 06:28:52] -rw-r--r-- 2 boinc boinc    569679 Oct 10 05:48 input.tar.gz
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc         0 Oct 10 05:48 boinc_lockfile
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc      2549 Oct 10 05:48 pandaJob.out
[2025-10-10 06:28:52] -rw------- 1 boinc boinc    975454 Oct 10 05:48 agis_schedconf.cvmfs.json
[2025-10-10 06:28:52] -rw------- 1 boinc boinc   1560580 Oct 10 05:48 agis_ddmendpoints.agis.ALL.json
[2025-10-10 06:28:52] drwx------ 5 boinc boinc      4096 Oct 10 05:48 pilot3
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc       529 Oct 10 06:27 boinc_task_state.xml
[2025-10-10 06:28:52] -rw------- 1 boinc boinc 194557373 Oct 10 06:27 HITS.46676269._015586.pool.root.1
[2025-10-10 06:28:52] -rw------- 1 boinc boinc      1018 Oct 10 06:28 memory_monitor_summary.json
[2025-10-10 06:28:52] -rw------- 1 boinc boinc    350736 Oct 10 06:28 log.46676269._015586.job.log.tgz.1
[2025-10-10 06:28:52] -rw------- 1 boinc boinc      7774 Oct 10 06:28 heartbeat.json
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc      8192 Oct 10 06:28 boinc_mmap_file
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc        27 Oct 10 06:28 wrapper_checkpoint.txt
[2025-10-10 06:28:52] -rw------- 1 boinc boinc        95 Oct 10 06:28 pilot_heartbeat.json
[2025-10-10 06:28:52] -rw------- 1 boinc boinc       891 Oct 10 06:28 pilotlog.txt
[2025-10-10 06:28:52] -rw------- 1 boinc boinc    383193 Oct 10 06:28 log.46676269._015586.job.log.1
[2025-10-10 06:28:52] -rw------- 1 boinc boinc       357 Oct 10 06:28 output.list
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc       620 Oct 10 06:28 runtime_log
[2025-10-10 06:28:52] -rw------- 1 boinc boinc    757760 Oct 10 06:28 result.tar.gz
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc      8740 Oct 10 06:28 runtime_log.err
[2025-10-10 06:28:52] -rw------- 1 boinc boinc       658 Oct 10 06:28 14nLDmYu3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhlNMDm1mou5n.diag
[2025-10-10 06:28:52] -rw-r--r-- 1 boinc boinc     21795 Oct 10 06:28 stderr.txt
[2025-10-10 06:28:52] HITS file was successfully produced:
[2025-10-10 06:28:52] -rw------- 1 boinc boinc 194557373 Oct 10 06:27 shared/HITS.pool.root.1
[2025-10-10 06:28:52]  *** Contents of shared directory: ***
[2025-10-10 06:28:52] total 407268
[2025-10-10 06:28:52] -rw-r--r-- 2 boinc boinc 221128410 Oct 10 05:48 ATLAS.root_0
[2025-10-10 06:28:52] -rw-r--r-- 2 boinc boinc     15120 Oct 10 05:48 start_atlas.sh
[2025-10-10 06:28:52] -rw-r--r-- 2 boinc boinc    569679 Oct 10 05:48 input.tar.gz
[2025-10-10 06:28:52] -rw------- 1 boinc boinc 194557373 Oct 10 06:27 HITS.pool.root.1
[2025-10-10 06:28:52] -rw------- 1 boinc boinc    757760 Oct 10 06:28 result.tar.gz
06:28:53 (639013): run_atlas exited; CPU time 25646.358923
06:28:53 (639013): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN